RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	ACH1	P32316	526 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	RPN2	P32565	945 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	SPO23	P33757	523 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	RPF2	P36160	344 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	YHR112C	P38716	378 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	YHR078W	P38799	552 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	MIT1	P40002	666 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	SDP1	P40479	209 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	YFR020W	P43600	232 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	SSY5	P47002	699 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	PYK2	P52489	506 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	SGF73	P53165	657 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	GOR1	P53839	350 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	MSC1	Q03104	513 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	RPC11	Q04307	110 aa	Predicted RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	YMR034C	Q05131	434 aa	Predicted RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	SPO77	Q06134	477 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	MLC2	Q06580	163 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	BRE4	Q07660	1125 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	NGL1	Q08213	363 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	SAM4	Q08985	325 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	NMD4	Q12129	218 aa		4.48	□□□□□ -1.69
RVB1	YDR190C	RPS21B	Q3E754	87 aa	Known RBP	4.48	□□□□□ -1.69
RVB1	YDR190C	SIR3	P06701	978 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	HMG2	P12684	1045 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	REV1	P12689	985 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	PET9	P18239	318 aa	Known RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	VPS33	P20795	691 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	KGD1	P20967	1014 aa	Known RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	GIT1	P25346	518 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
RVB1	YDR190C	HIR2	P32480	875 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	PXA2	P34230	853 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	RCN1	P36054	211 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	IML3	P38265	245 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	YLF2	P38746	405 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	VMA22	P38784	181 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	YPT35	P38815	214 aa	Known RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	GDI1	P39958	451 aa	Known RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	NDE1	P40215	560 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	PRE6	P40303	254 aa	Known RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	SER33	P40510	469 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	YJL043W	P47053	257 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	NBP35	P52920	328 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	CPR8	P53728	308 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	GIP3	Q03016	1276 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	RRP17	Q04031	235 aa	Predicted RBP	4.47	□□□□□ -1.69
RVB1	YDR190C	GAD1	Q04792	585 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	MDM36	Q06820	579 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	ATG10	Q07879	167 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	YLR036C	Q07986	203 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	DCI1	Q08558	271 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	STT4	P37297	1900 aa		4.47	□□□□□ -1.69
RVB1	YDR190C	MET2	P08465	486 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	SLM5	P25345	492 aa	Known RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	KRR1	P25586	316 aa	Predicted RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	SSO1	P32867	290 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	PMT1	P33775	817 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	HCS1	P34243	683 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	STP2	P38704	541 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	YHK8	P38776	514 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	SBE22	P38814	852 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	GIM4	P40005	111 aa	Known RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	URM1	P40554	99 aa	Predicted RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	JHD2	P47156	728 aa	Predicted RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	BPL1	P48445	690 aa	Predicted RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	MSE1	P48525	536 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	IMD4	P50094	524 aa	Known RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	ORM1	P53224	222 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	YGR168C	P53293	376 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	TPS1	Q00764	495 aa	Known RBP	4.46	□□□□□ -1.7
RVB1	YDR190C	OAZ1	Q02803	292 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	YPL071C	Q02864	156 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	CCE1	Q03702	353 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	TMN2	Q04562	672 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	NEJ1	Q06148	342 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	TEN1	Q07921	160 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	RRT8	Q08219	342 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	MED7	Q08278	222 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	PEX27	Q08580	376 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	TRM8	Q12009	286 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	NFI1	Q12216	726 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	PNS1	Q12412	539 aa		4.46	□□□□□ -1.7
RVB1	YDR190C	LAT1	P12695	482 aa	Known RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	RPS1B	P23248	255 aa	Known RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	YSR3	P23501	404 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	PHO84	P25297	587 aa	Known RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	YCL049C	P25577	312 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	YIM1	P28625	365 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	PET309	P32522	965 aa	Predicted RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	MGM101	P32787	269 aa	Known RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	GPX2	P38143	162 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	ZTA1	P38230	334 aa	Known RBP	4.45	□□□□□ -1.7
RVB1	YDR190C	MED6	P38782	295 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	YHR177W	P38867	453 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	GGC1	P38988	300 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	MET30	P39014	640 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	AIM2	P39721	246 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	PZF1	P39933	429 aa		4.45	□□□□□ -1.7
RVB1	YDR190C	ISC1	P40015	477 aa	Known RBP	4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 171.2 ms