RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W TOS3P43637 560 aa4.32□□□□□ -1.72
CKS1YBR135W EAF6P47128 113 aa4.32□□□□□ -1.72
CKS1YBR135W TOS2P50078 622 aa4.32□□□□□ -1.72
CKS1YBR135W RTT103Q05543 409 aa4.32□□□□□ -1.72
CKS1YBR135W RAX1Q08760 435 aa4.32□□□□□ -1.72
CKS1YBR135W NCA2Q12374 616 aa4.32□□□□□ -1.72
CKS1YBR135W CEX1Q12453 761 aa4.32□□□□□ -1.72
CKS1YBR135W SFG1Q12507 346 aa4.32□□□□□ -1.72
CKS1YBR135W SCH9P11792 824 aaKnown RBP4.31□□□□□ -1.72
CKS1YBR135W CPR4P25334 318 aa4.31□□□□□ -1.72
CKS1YBR135W YCL068CP25593 260 aa4.31□□□□□ -1.72
CKS1YBR135W CHK1P38147 527 aa4.31□□□□□ -1.72
CKS1YBR135W SPP381P38282 291 aaPredicted RBP4.31□□□□□ -1.72
CKS1YBR135W YHR218WP38899 603 aa4.31□□□□□ -1.72
CKS1YBR135W PES4P39684 611 aa4.31□□□□□ -1.72
CKS1YBR135W YIL067CP40514 678 aa4.31□□□□□ -1.72
CKS1YBR135W FYV8P46949 817 aaKnown RBP4.31□□□□□ -1.72
CKS1YBR135W NCA3P46955 337 aa4.31□□□□□ -1.72
CKS1YBR135W UTP6Q02354 440 aaKnown RBP4.31□□□□□ -1.72
CKS1YBR135W PSY3Q12318 242 aa4.31□□□□□ -1.72
CKS1YBR135W PHO2P07269 559 aa4.3□□□□□ -1.72
CKS1YBR135W YUR1P26725 428 aa4.3□□□□□ -1.72
CKS1YBR135W SMI1P32566 505 aa4.3□□□□□ -1.72
CKS1YBR135W YHR177WP38867 453 aa4.3□□□□□ -1.72
CKS1YBR135W PRM5P40476 318 aa4.3□□□□□ -1.72
CKS1YBR135W GPI8P49018 411 aa4.3□□□□□ -1.72
CKS1YBR135W YNR068CP53754 272 aa4.3□□□□□ -1.72
CKS1YBR135W YNL143CP53908 130 aa4.3□□□□□ -1.72
CKS1YBR135W CCE1Q03702 353 aa4.3□□□□□ -1.72
CKS1YBR135W RRN11Q04712 507 aa4.3□□□□□ -1.72
CKS1YBR135W PML1Q07930 204 aaPredicted RBP4.3□□□□□ -1.72
CKS1YBR135W ERV2Q12284 196 aa4.3□□□□□ -1.72
CKS1YBR135W NBL1Q3E7Y6 73 aa4.3□□□□□ -1.72
CKS1YBR135W ATP1P07251 545 aaKnown RBP4.29□□□□□ -1.72
CKS1YBR135W VMA2P16140 517 aaKnown RBP4.29□□□□□ -1.72
CKS1YBR135W EXG1P23776 448 aaKnown RBP4.29□□□□□ -1.72
CKS1YBR135W PSO2P30620 661 aa4.29□□□□□ -1.72
CKS1YBR135W TOA2P32774 122 aa4.29□□□□□ -1.72
CKS1YBR135W COX13P32799 129 aa4.29□□□□□ -1.72
CKS1YBR135W SKT5P34226 696 aa4.29□□□□□ -1.72
CKS1YBR135W NAS2P40555 220 aa4.29□□□□□ -1.72
CKS1YBR135W WWM1P43582 211 aaKnown RBP4.29□□□□□ -1.72
CKS1YBR135W RPA34P47006 233 aaPredicted RBP4.29□□□□□ -1.72
CKS1YBR135W YGR117CP53270 476 aa4.29□□□□□ -1.72
CKS1YBR135W PDR16P53860 351 aaKnown RBP4.29□□□□□ -1.72
CKS1YBR135W SMA2Q04658 369 aa4.29□□□□□ -1.72
CKS1YBR135W ALE1Q08548 619 aa4.29□□□□□ -1.72
CKS1YBR135W TRP1P00912 224 aa4.28□□□□□ -1.72
CKS1YBR135W PAB1P04147 577 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72 RIP-Chip
CKS1YBR135W ARF1P11076 181 aaKnown RBP4.28□□□□□ -1.72
CKS1YBR135W CAP2P13517 287 aa4.28□□□□□ -1.72
CKS1YBR135W RDS1P25611 832 aa4.28□□□□□ -1.72
CKS1YBR135W CPR3P25719 182 aa4.28□□□□□ -1.72
CKS1YBR135W YEF1P32622 495 aa4.28□□□□□ -1.72
CKS1YBR135W SDH3P33421 198 aa4.28□□□□□ -1.72
CKS1YBR135W DOA1P36037 715 aa4.28□□□□□ -1.72
CKS1YBR135W MEP1P40260 492 aa4.28□□□□□ -1.72
CKS1YBR135W ATM1P40416 690 aa4.28□□□□□ -1.72
CKS1YBR135W SCS3P53012 380 aa4.28□□□□□ -1.72
CKS1YBR135W CUE3P53137 624 aaKnown RBP4.28□□□□□ -1.72
CKS1YBR135W COS1P53822 381 aa4.28□□□□□ -1.72
CKS1YBR135W BOR1P53838 576 aa4.28□□□□□ -1.72
CKS1YBR135W IMP4P53941 290 aaKnown RBP4.28□□□□□ -1.72
CKS1YBR135W ASA1Q06822 443 aa4.28□□□□□ -1.72
CKS1YBR135W POM152P39685 1337 aa4.27□□□□□ -1.73
CKS1YBR135W TPK3P05986 398 aa4.27□□□□□ -1.73
CKS1YBR135W CYC3P06182 269 aa4.27□□□□□ -1.73
CKS1YBR135W RNA1P11745 407 aaKnown RBP4.27□□□□□ -1.73
CKS1YBR135W PHA2P32452 334 aa4.27□□□□□ -1.73
CKS1YBR135W SPT10P35208 640 aa4.27□□□□□ -1.73
CKS1YBR135W YBR139WP38109 508 aa4.27□□□□□ -1.73
CKS1YBR135W MSG5P38590 489 aa4.27□□□□□ -1.73
CKS1YBR135W EFM3P47163 339 aa4.27□□□□□ -1.73
CKS1YBR135W MTM1P53320 366 aa4.27□□□□□ -1.73
CKS1YBR135W RRN9P53437 365 aa4.27□□□□□ -1.73
CKS1YBR135W AQR1P53943 586 aa4.27□□□□□ -1.73
CKS1YBR135W HER2Q03557 464 aa4.27□□□□□ -1.73
CKS1YBR135W PBA1Q05778 276 aa4.27□□□□□ -1.73
CKS1YBR135W YTH1Q06102 208 aaPredicted RBP4.27□□□□□ -1.73
CKS1YBR135W YPR078CQ06813 372 aa4.27□□□□□ -1.73
CKS1YBR135W TSR1Q07381 788 aaKnown RBP4.27□□□□□ -1.73
CKS1YBR135W UTP10P42945 1769 aaKnown RBP4.27□□□□□ -1.73
CKS1YBR135W SSC1P0CS90 654 aaKnown RBP4.26□□□□□ -1.73
CKS1YBR135W KAR9P32526 644 aa4.26□□□□□ -1.73
CKS1YBR135W YBL028CP38202 106 aa4.26□□□□□ -1.73
CKS1YBR135W RFS1P38234 210 aaKnown RBP4.26□□□□□ -1.73
CKS1YBR135W RTR1P40084 226 aaPredicted RBP4.26□□□□□ -1.73
CKS1YBR135W SPR6Q01684 191 aa4.26□□□□□ -1.73
CKS1YBR135W DIB1Q06819 143 aaPredicted RBP4.26□□□□□ -1.73
CKS1YBR135W MDM36Q06820 579 aa4.26□□□□□ -1.73
CKS1YBR135W LDS2Q08218 356 aa4.26□□□□□ -1.73
CKS1YBR135W YOP1Q12402 180 aa4.26□□□□□ -1.73
CKS1YBR135W STF1P01098 86 aa4.25□□□□□ -1.73
CKS1YBR135W HHF1P02309 103 aaKnown RBP4.25□□□□□ -1.73
CKS1YBR135W SPT15P13393 240 aaKnown RBP4.25□□□□□ -1.73
CKS1YBR135W TRX1P22217 103 aaKnown RBP4.25□□□□□ -1.73
CKS1YBR135W SBE22P38814 852 aa4.25□□□□□ -1.73
CKS1YBR135W COX14P39103 70 aa4.25□□□□□ -1.73
CKS1YBR135W SHE4P51534 789 aa4.25□□□□□ -1.73
CKS1YBR135W MPS2P53159 387 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms