RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	KAP120	Q02932	1032 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	CCE1	Q03702	353 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	YDL007C-A	Q2V2Q0	85 aa		0.61	□□□□□ -2.31
BEM3	YPL115C	PDX1	P16451	410 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
BEM3	YPL115C	ADK2	P26364	225 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	TIP1	P27654	210 aa	Predicted RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	ICL1	P28240	557 aa	Predicted RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	ERG3	P32353	365 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	HIR2	P32480	875 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	ANR2	P36090	516 aa	Predicted RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	ATP3	P38077	311 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	MET18	P40469	1032 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	ALF1	P53904	254 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MMR1	Q06324	491 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	CAT8	P39113	1433 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	ECM5	Q03214	1411 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	TRM3	Q07527	1436 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	NUP192	P47054	1683 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	IMA3	P0CW40	589 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	IMA4	P0CW41	589 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	CTR86	P25355	563 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	RML2	P32611	393 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	RRP1	P35178	278 aa	Predicted RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	KKQ8	P36004	724 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	RRN10	P38204	145 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	SLM4	P38247	162 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MIG3	P39943	394 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	YIL089W	P40500	205 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	SEC28	P40509	296 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	ALK1	P43633	760 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	DLD2	P46681	530 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	FYV8	P46949	817 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	AZR1	P50080	613 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	YNR048W	P53740	393 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MEH1	Q02205	184 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	FIN1	Q03898	291 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	IMA2	Q08295	589 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	CUE5	Q08412	411 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	PEX27	Q08580	376 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	SPE3	Q12074	293 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	RRI2	Q12348	645 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	ORT1	Q12375	292 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	PDR12	Q02785	1511 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	FKS1	P38631	1876 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	POL1	P13382	1468 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	UFD4	P33202	1483 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	TEF1	P02994	458 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
BEM3	YPL115C	PHA2	P32452	334 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	DRE2	P36152	348 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	YER186C	P40101	306 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	KEG1	P43614	200 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	TCB2	P48231	1178 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	CWC25	P53854	179 aa	Known RBP	0.6	□□□□□ -2.31
BEM3	YPL115C	YPL107W	Q02873	248 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MRP51	Q02950	344 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	PEX25	Q02969	394 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	YMR181C	Q03231	154 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	YLR345W	Q06137	509 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	AEP3	Q12089	606 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	MCT1	Q12283	360 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	TOM1	Q03280	3268 aa		0.6	□□□□□ -2.31
BEM3	YPL115C	SPS4	P09937	338 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	GRR1	P24814	1151 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	SIN4	P32259	974 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	MNS1	P32906	549 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	NOP4	P37838	685 aa	Known RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	RCK2	P38623	610 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	PFS1	P38872	237 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	AIM10	P39965	576 aa	Known RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	ATM1	P40416	690 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	YIL029C	P40538	142 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	MDE1	P47095	244 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	YIP1	P53039	248 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	TRM112	P53738	135 aa	Predicted RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	RPA49	Q01080	415 aa	Predicted RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	HOT1	Q03213	719 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	PRP42	Q03776	544 aa	Known RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	MFG1	Q07684	458 aa		0.59	□□□□□ -2.31
BEM3	YPL115C	SMF3	Q12078	473 aa	Predicted RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	RPN5	Q12250	445 aa	Known RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	PFK27	Q12471	397 aa	Predicted RBP	0.59	□□□□□ -2.31
BEM3	YPL115C	TPK3	P05986	398 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	GAL7	P08431	366 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	PRB1	P09232	635 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	NIP1	P32497	812 aa	Known RBP	0.59	□□□□□ -2.32
BEM3	YPL115C	MUD1	P32605	298 aa	Known RBP	0.59	□□□□□ -2.32
BEM3	YPL115C	NIP100	P33420	868 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	MRPL27	P36526	146 aa	Predicted RBP	0.59	□□□□□ -2.32
BEM3	YPL115C	STP2	P38704	541 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	LYS1	P38998	373 aa	RIP-Chip data	0.59	□□□□□ -2.32	not detected
BEM3	YPL115C	DSE1	P40077	573 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	SAS2	P40963	338 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	IRC6	P43615	237 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	YGR250C	P53316	781 aa	Known RBP	0.59	□□□□□ -2.32
BEM3	YPL115C	NRM1	P53718	249 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	ACL4	Q03771	387 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	IES4	Q08561	116 aa		0.59	□□□□□ -2.32
BEM3	YPL115C	PGA3	Q12746	312 aa	Known RBP	0.59	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms