RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W PET9P18239 318 aaKnown RBP5.56□□□□□ -1.52
ATG4YNL223W RPB5P20434 215 aa5.56□□□□□ -1.52
ATG4YNL223W YMC1P32331 307 aa5.56□□□□□ -1.52
ATG4YNL223W VMA6P32366 345 aaKnown RBP5.56□□□□□ -1.52
ATG4YNL223W RCY1P39531 840 aa5.56□□□□□ -1.52
ATG4YNL223W SNM1P40993 198 aa5.56□□□□□ -1.52
ATG4YNL223W HOC1P47124 396 aa5.56□□□□□ -1.52
ATG4YNL223W SED5Q01590 340 aa5.56□□□□□ -1.52
ATG4YNL223W AGE1Q04412 482 aa5.56□□□□□ -1.52
ATG4YNL223W KRE28Q04431 385 aa5.56□□□□□ -1.52
ATG4YNL223W RRN11Q04712 507 aa5.56□□□□□ -1.52
ATG4YNL223W RNH202Q05635 350 aa5.56□□□□□ -1.52
ATG4YNL223W STP3Q05937 343 aa5.56□□□□□ -1.52
ATG4YNL223W RKM5Q12367 367 aa5.56□□□□□ -1.52
ATG4YNL223W YKL033W-AQ86ZR7 236 aa5.56□□□□□ -1.52
ATG4YNL223W SIR3P06701 978 aa5.55□□□□□ -1.52
ATG4YNL223W RRP7P25368 297 aaPredicted RBP5.55□□□□□ -1.52
ATG4YNL223W CHA1P25379 360 aaKnown RBP5.55□□□□□ -1.52
ATG4YNL223W RPS5P26783 225 aaKnown RBP5.55□□□□□ -1.52
ATG4YNL223W YLF2P38746 405 aa5.55□□□□□ -1.52
ATG4YNL223W IPT1P38954 527 aa5.55□□□□□ -1.52
ATG4YNL223W AST2P39945 430 aaKnown RBP5.55□□□□□ -1.52
ATG4YNL223W KRE29P40026 464 aa5.55□□□□□ -1.52
ATG4YNL223W LTP1P40347 161 aa5.55□□□□□ -1.52
ATG4YNL223W MET28P40573 187 aa5.55□□□□□ -1.52
ATG4YNL223W IBA57P47158 497 aa5.55□□□□□ -1.52
ATG4YNL223W TWF1P53250 332 aa5.55□□□□□ -1.52
ATG4YNL223W MTQ1P53944 314 aa5.55□□□□□ -1.52
ATG4YNL223W TPS1Q00764 495 aaKnown RBP5.55□□□□□ -1.52
ATG4YNL223W FDH1Q08911 376 aa5.55□□□□□ -1.52
ATG4YNL223W YTM1Q12024 460 aaPredicted RBP5.55□□□□□ -1.52
ATG4YNL223W PST2Q12335 198 aaKnown RBP5.55□□□□□ -1.52
ATG4YNL223W YOR019WQ99248 730 aa5.55□□□□□ -1.52
ATG4YNL223W MET17P06106 444 aa5.54□□□□□ -1.52
ATG4YNL223W THR1P17423 357 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W HOP1P20050 605 aa5.54□□□□□ -1.52
ATG4YNL223W DPB2P24482 689 aaPredicted RBP5.54□□□□□ -1.52
ATG4YNL223W YJU2P28320 278 aaPredicted RBP5.54□□□□□ -1.52
ATG4YNL223W CDC12P32468 407 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W HOG1P32485 435 aa5.54□□□□□ -1.52
ATG4YNL223W TEF4P36008 412 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W MAE1P36013 669 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W AUR1P36107 401 aaPredicted RBP5.54□□□□□ -1.52
ATG4YNL223W YRO2P38079 344 aa5.54□□□□□ -1.52
ATG4YNL223W TAT2P38967 592 aa5.54□□□□□ -1.52
ATG4YNL223W PRP39P39682 629 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W ISC1P40015 477 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W SOK1P40317 901 aa5.54□□□□□ -1.52
ATG4YNL223W RIM21P48565 533 aa5.54□□□□□ -1.52
ATG4YNL223W SYF2P53277 215 aaPredicted RBP5.54□□□□□ -1.52
ATG4YNL223W GRX5Q02784 150 aa5.54□□□□□ -1.52
ATG4YNL223W RSA3Q05942 220 aaKnown RBP5.54□□□□□ -1.52
ATG4YNL223W YLR345WQ06137 509 aa5.54□□□□□ -1.52
ATG4YNL223W TRM10Q12400 293 aa5.54□□□□□ -1.52
ATG4YNL223W RPL1AP0CX43 217 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W RPL1BP0CX44 217 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W CBS1P14066 229 aa5.53□□□□□ -1.52
ATG4YNL223W AAC3P18238 307 aa5.53□□□□□ -1.52
ATG4YNL223W SNF5P18480 905 aa5.53□□□□□ -1.52
ATG4YNL223W CWP1P28319 239 aa5.53□□□□□ -1.52
ATG4YNL223W PTR2P32901 601 aa5.53□□□□□ -1.52
ATG4YNL223W MSN2P33748 704 aa5.53□□□□□ -1.52
ATG4YNL223W UTH1P36135 365 aa5.53□□□□□ -1.52
ATG4YNL223W PAC1P39946 494 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W GIP2P40036 548 aa5.53□□□□□ -1.52
ATG4YNL223W IES5P40060 125 aa5.53□□□□□ -1.52
ATG4YNL223W RRG9P40156 214 aa5.53□□□□□ -1.52
ATG4YNL223W FET5P43561 622 aa5.53□□□□□ -1.52
ATG4YNL223W HMS2P47175 358 aa5.53□□□□□ -1.52
ATG4YNL223W RPS12P48589 143 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W NUP57P48837 541 aa5.53□□□□□ -1.52
ATG4YNL223W IMD4P50094 524 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W ROM1P53046 1155 aa5.53□□□□□ -1.52
ATG4YNL223W YGR168CP53293 376 aa5.53□□□□□ -1.52
ATG4YNL223W CTL1Q03220 320 aaKnown RBP5.53□□□□□ -1.52
ATG4YNL223W PRP3Q03338 469 aaPredicted RBP5.53□□□□□ -1.52
ATG4YNL223W YMD8Q03697 442 aa5.53□□□□□ -1.52
ATG4YNL223W NAT4Q04751 285 aa5.53□□□□□ -1.52
ATG4YNL223W FMP42Q04991 504 aa5.53□□□□□ -1.52
ATG4YNL223W BNA5Q05979 453 aa5.53□□□□□ -1.52
ATG4YNL223W GIC2Q06648 383 aa5.53□□□□□ -1.52
ATG4YNL223W RTK1Q12100 620 aaPredicted RBP5.53□□□□□ -1.52
ATG4YNL223W MOD5P07884 428 aa5.52□□□□□ -1.53
ATG4YNL223W TFS1P14306 219 aa5.52□□□□□ -1.53
ATG4YNL223W YCK1P23291 538 aa5.52□□□□□ -1.53
ATG4YNL223W PRP19P32523 503 aaKnown RBP5.52□□□□□ -1.53
ATG4YNL223W ECM4P36156 370 aa5.52□□□□□ -1.53
ATG4YNL223W CTF8P38877 133 aa5.52□□□□□ -1.53
ATG4YNL223W SWP82P43554 623 aa5.52□□□□□ -1.53
ATG4YNL223W IRC5P43610 853 aa5.52□□□□□ -1.53
ATG4YNL223W AAD10P47182 288 aa5.52□□□□□ -1.53
ATG4YNL223W MPC1P53157 130 aaKnown RBP5.52□□□□□ -1.53
ATG4YNL223W MEP3P53390 489 aa5.52□□□□□ -1.53
ATG4YNL223W ARP10Q04549 284 aa5.52□□□□□ -1.53
ATG4YNL223W MFB1Q04922 465 aa5.52□□□□□ -1.53
ATG4YNL223W EMG1Q06287 252 aaKnown RBP5.52□□□□□ -1.53
ATG4YNL223W VPS36Q06696 566 aa5.52□□□□□ -1.53
ATG4YNL223W YEH1Q07804 573 aa5.52□□□□□ -1.53
ATG4YNL223W YLR030WQ07967 263 aa5.52□□□□□ -1.53
ATG4YNL223W NTG2Q08214 380 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms