RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	RTT10	Q08924	1013 aa		11.22	□□□□□ -0.61
CUE1	YMR264W	PUS9	Q12069	462 aa		11.22	□□□□□ -0.61
CUE1	YMR264W	NFI1	Q12216	726 aa		11.22	□□□□□ -0.61
CUE1	YMR264W	ENA5	Q12691	1091 aa		11.22	□□□□□ -0.61
CUE1	YMR264W	RRP7	P25368	297 aa	Predicted RBP	11.21	□□□□□ -0.61
CUE1	YMR264W	NTH1	P32356	751 aa		11.21	□□□□□ -0.61
CUE1	YMR264W	YBR139W	P38109	508 aa		11.21	□□□□□ -0.61
CUE1	YMR264W	BAT1	P38891	393 aa	Known RBP	11.21	□□□□□ -0.61
CUE1	YMR264W	NEO1	P40527	1151 aa		11.21	□□□□□ -0.61
CUE1	YMR264W	BOP2	Q06150	570 aa		11.21	□□□□□ -0.61
CUE1	YMR264W	EMG1	Q06287	252 aa	Known RBP	11.21	□□□□□ -0.61
CUE1	YMR264W	RPC40	P07703	335 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	FUR1	P18562	216 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	AGP1	P25376	633 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	TUL1	P36096	758 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	TCD2	P36101	447 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	PIM1	P36775	1133 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	YHR112C	P38716	378 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	YAL037W	P39728	267 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	TIF34	P40217	347 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	YIL108W	P40483	696 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	RHO3	Q00245	231 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	RHO4	Q00246	291 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	TPS1	Q00764	495 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	YDR444W	Q04093	687 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	GAL83	Q04739	417 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	GSH2	Q08220	491 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	DIN7	Q12086	430 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	SKS1	Q12505	502 aa		11.2	□□□□□ -0.62
CUE1	YMR264W	PNO1	Q99216	274 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	MEX67	Q99257	599 aa	Known RBP	11.2	□□□□□ -0.62
CUE1	YMR264W	BUB3	P26449	341 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	DOM34	P33309	386 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	SEC66	P33754	206 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	RCY1	P39531	840 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	RRG9	P40156	214 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	TWF1	P53250	332 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	NEJ1	Q06148	342 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	MDM36	Q06820	579 aa		11.19	□□□□□ -0.62
CUE1	YMR264W	YTM1	Q12024	460 aa	Predicted RBP	11.19	□□□□□ -0.62
CUE1	YMR264W	SIR3	P06701	978 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	SAM35	P14693	329 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	PPH21	P23594	369 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	BUD5	P25300	642 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	ARN2	P38724	620 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	CTF8	P38877	133 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	RET2	P43621	546 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	UBC9	P50623	157 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	NQM1	P53228	333 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	YGR168C	P53293	376 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	YGR250C	P53316	781 aa	Known RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	PXR1	P53335	271 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	NUP49	Q02199	472 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	RRP17	Q04031	235 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	GPI17	Q04080	534 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	MGR3	Q04472	501 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	YMR310C	Q04867	317 aa	Predicted RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	RQC1	Q05468	723 aa	Known RBP	11.18	□□□□□ -0.62
CUE1	YMR264W	MRX10	Q05648	414 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	YPL066W	Q12194	479 aa		11.18	□□□□□ -0.62
CUE1	YMR264W	COX3	P00420	269 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	TFS1	P14306	219 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	IDP1	P21954	428 aa	Known RBP	11.17	□□□□□ -0.62
CUE1	YMR264W	YJU2	P28320	278 aa	Predicted RBP	11.17	□□□□□ -0.62
CUE1	YMR264W	SSH4	P32343	579 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	DOA1	P36037	715 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	PFS1	P38872	237 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	MET28	P40573	187 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	SNM1	P40993	198 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	ALR2	P43553	858 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	FAA4	P47912	694 aa	Known RBP	11.17	□□□□□ -0.62
CUE1	YMR264W	MNN10	P50108	393 aa	Known RBP	11.17	□□□□□ -0.62
CUE1	YMR264W	YML096W	Q04489	525 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	RNH202	Q05635	350 aa		11.17	□□□□□ -0.62
CUE1	YMR264W	SEC2	P17065	759 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	VPS33	P20795	691 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	NPR1	P22211	790 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	SUI1	P32911	108 aa	Known RBP	11.16	□□□□□ -0.62
CUE1	YMR264W	TEF4	P36008	412 aa	Known RBP	11.16	□□□□□ -0.62
CUE1	YMR264W	OMA1	P36163	345 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	EHT1	P38295	451 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	AIM20	P40451	204 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	HOS2	P53096	452 aa	Predicted RBP	11.16	□□□□□ -0.62
CUE1	YMR264W	CDH1	P53197	566 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	YVH1	Q02256	364 aa	Known RBP	11.16	□□□□□ -0.62
CUE1	YMR264W	RNH1	Q04740	348 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	BSC1	Q12140	328 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	RBD2	Q12270	262 aa		11.16	□□□□□ -0.62
CUE1	YMR264W	ASF2	P32448	525 aa	Predicted RBP	11.15	□□□□□ -0.62
CUE1	YMR264W	SFA1	P32771	386 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	SRX1	P36077	127 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	FMP46	P36141	133 aa	Known RBP	11.15	□□□□□ -0.62
CUE1	YMR264W	SEA4	P38164	1038 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	SBE22	P38814	852 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	FMO1	P38866	432 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	LYS1	P38998	373 aa	RIP-Chip data	11.15	□□□□□ -0.62	not detected
CUE1	YMR264W	JLP2	P40206	208 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	LRO1	P40345	661 aa		11.15	□□□□□ -0.62
CUE1	YMR264W	RPL10	P41805	221 aa	Known RBP	11.15	□□□□□ -0.62
CUE1	YMR264W	HXT16	P47185	567 aa		11.15	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms