RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	RPA49	Q01080	415 aa	Predicted RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	SKO1	Q02100	647 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	FRQ1	Q06389	190 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SYT1	Q06836	1226 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	BSC6	Q08280	497 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SAM3	Q08986	587 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	RCN2	Q12044	265 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	YPL150W	Q12152	901 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	YDR061W	Q12298	539 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	ATG31	Q12421	196 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	CSR2	Q12734	1121 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	FLO11	P08640	1367 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	AI1	P03875	834 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	CBP1	P07252	654 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SPS4	P09937	338 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	MRP1	P10662	321 aa	Known RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	CLN3	P13365	580 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	UBC1	P21734	215 aa	Known RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	ESS1	P22696	170 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	YCR061W	P25639	631 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	PYC2	P32327	1180 aa	Known RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	MAC1	P35192	417 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	DUG2	P38149	878 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	PCA1	P38360	1216 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SER2	P42941	309 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	PHO86	P46956	311 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SBH2	P52871	88 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	RTT102	P53330	157 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	YNL143C	P53908	130 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	ALG11	P53954	548 aa	Known RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	SRT1	Q03175	343 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	AIM33	Q04516	312 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	RRP42	Q12277	265 aa	Predicted RBP	4.82	□□□□□ -1.64
SEC39	YLR440C	PSF1	Q12488	208 aa		4.82	□□□□□ -1.64
SEC39	YLR440C	SEC53	P07283	254 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	SAC7	P17121	654 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	RNR3	P21672	869 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	RFA1	P22336	621 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	PCL2	P25693	308 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	AFG1	P32317	509 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	ABD1	P32783	436 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	SHP1	P34223	423 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	TSA1	P34760	196 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	OAR1	P35731	278 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	SHG1	P38337	142 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	PMT6	P42934	759 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	RGD2	P43556	714 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	TOS3	P43637	560 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	TRS85	P46944	698 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YGL185C	P53100	379 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	RRT6	P53117	311 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	SPC98	P53540	846 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	AAT1	Q01802	451 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	SNU56	Q03782	492 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	NRT1	Q08485	598 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	CDC33	P07260	213 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	MAS2	P11914	482 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	PEP5	P12868	1029 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	STF2	P16965	84 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	SAR1	P20606	190 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	YIM1	P28625	365 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	SIP2	P34164	415 aa	Known RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	MRPL15	P36523	253 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	DER1	P38307	211 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	POP4	P38336	279 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	PRE3	P38624	215 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	SMF1	P38925	575 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	ERV46	P39727	415 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YER130C	P39959	443 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	PUG1	P40100	303 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	MAM33	P40513	266 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YAE1	P47118	141 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	AZR1	P50080	613 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YNR062C	P53748	327 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	ATG4	P53867	494 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YNL140C	P53910	189 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YNL040W	P53960	456 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC39	YLR440C	MRX4	Q12467	430 aa		4.81	□□□□□ -1.64
SEC39	YLR440C	YER152C	P10356	443 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	GAL3	P13045	520 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	RPL24B	P24000	155 aa	Known RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	MEK1	P24719	497 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	ECM25	P32525	599 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	LHP1	P33399	275 aa	Known RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	SPC34	P36131	295 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	TVP38	P36164	337 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	VBA5	P36172	582 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	AIM46	P38885	310 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	UME6	P39001	836 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	VMA7	P39111	118 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	EAF5	P39995	279 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	CDC40	P40968	455 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	LSB6	P42951	607 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	MOG1	P47123	218 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	ARH1	P48360	493 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	CTF18	P49956	741 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	MSC1	Q03104	513 aa		4.8	□□□□□ -1.64
SEC39	YLR440C	MTG1	Q03151	367 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC39	YLR440C	MYO5	Q04439	1219 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms