Protein–RNA interactions for Protein: P38337

SHG1, COMPASS component SHG1, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHG1P38337 NSR1YGR159C 1245 nt16.45■□□□□ 0.22
SHG1P38337 YML009W-BYML009W-B 477 nt15.98■□□□□ 0.15
SHG1P38337 NOP1YDL014W 984 nt15.37■□□□□ 0.05
SHG1P38337 MDJ1YFL016C 1536 nt15.13■□□□□ 0.01
SHG1P38337 YJL027CYJL027C 417 nt14.01□□□□□ -0.17
SHG1P38337 YKL036CYKL036C 393 nt13.49□□□□□ -0.25
SHG1P38337 SRX1YKL086W 384 nt13.33□□□□□ -0.28
SHG1P38337 SSA3YBL075C 1950 nt13.25□□□□□ -0.29
SHG1P38337 YBR190WYBR190W 312 nt13.16□□□□□ -0.3
SHG1P38337 Q0297Q0297 156 nt13.14□□□□□ -0.31
SHG1P38337 DBP2YNL112W 1641 nt13.06□□□□□ -0.32
SHG1P38337 RTC3YHR087W 336 nt12.86□□□□□ -0.35
SHG1P38337 YCR051WYCR051W 669 nt12.62□□□□□ -0.39
SHG1P38337 TRN1tP(UGG)A 72 nt12.41□□□□□ -0.42
SHG1P38337 SUF9tP(UGG)F 72 nt12.41□□□□□ -0.42
SHG1P38337 SUF8tP(UGG)H 72 nt12.41□□□□□ -0.42
SHG1P38337 tP(UGG)LtP(UGG)L 72 nt12.41□□□□□ -0.42
SHG1P38337 SUF7tP(UGG)M 72 nt12.41□□□□□ -0.42
SHG1P38337 tP(UGG)N1tP(UGG)N1 72 nt12.41□□□□□ -0.42
SHG1P38337 tP(UGG)N2tP(UGG)N2 72 nt12.41□□□□□ -0.42
SHG1P38337 tP(UGG)O1tP(UGG)O1 72 nt12.41□□□□□ -0.42
SHG1P38337 SUF11tP(UGG)O2 72 nt12.41□□□□□ -0.42
SHG1P38337 RVS167YDR388W 1449 nt12.37□□□□□ -0.43
SHG1P38337 PUT4YOR348C 1884 nt12.35□□□□□ -0.43
SHG1P38337 CCC1YLR220W 969 nt12.29□□□□□ -0.44
SHG1P38337 SCJ1YMR214W 1134 nt11.97□□□□□ -0.49
SHG1P38337 POA1YBR022W 534 nt11.92□□□□□ -0.5
SHG1P38337 ARE1YCR048W 1833 nt11.92□□□□□ -0.5
SHG1P38337 SCS3YGL126W 1143 nt11.88□□□□□ -0.51
SHG1P38337 YHR049C-AYHR049C-A 297 nt11.83□□□□□ -0.52
SHG1P38337 BSC6YOL137W 1494 nt11.81□□□□□ -0.52
SHG1P38337 RPP1BYDL130W 321 nt11.8□□□□□ -0.52
SHG1P38337 SAH1YER043C 1350 nt11.76□□□□□ -0.53
SHG1P38337 URN1YPR152C 1398 nt11.75□□□□□ -0.53
SHG1P38337 OPI9YLR338W 858 nt11.72□□□□□ -0.53
SHG1P38337 SHR5YOL110W 714 nt11.7□□□□□ -0.54
SHG1P38337 YOL085CYOL085C 342 nt11.65□□□□□ -0.54
SHG1P38337 SSA4YER103W 1929 nt11.61□□□□□ -0.55
SHG1P38337 SPT5YML010W 3192 nt11.6□□□□□ -0.55
SHG1P38337 RPN10YHR200W 807 nt11.56□□□□□ -0.56
SHG1P38337 BUD23YCR047C 828 nt11.54□□□□□ -0.56
SHG1P38337 tP(UGG)O3tP(UGG)O3 72 nt11.52□□□□□ -0.57
SHG1P38337 PKP1YIL042C 1185 nt11.52□□□□□ -0.57
SHG1P38337 DEP1YAL013W 1218 nt11.52□□□□□ -0.57
SHG1P38337 PUN1YLR414C 792 nt11.43□□□□□ -0.58
SHG1P38337 YNL208WYNL208W 600 nt11.35□□□□□ -0.59
SHG1P38337 PTC2YER089C 1395 nt11.33□□□□□ -0.6
SHG1P38337 NAB2YGL122C 1578 nt11.32□□□□□ -0.6
SHG1P38337 PET122YER153C 765 nt11.3□□□□□ -0.6
SHG1P38337 PAC11YDR488C 1602 nt11.27□□□□□ -0.6
SHG1P38337 NVJ2YPR091C 2313 nt11.23□□□□□ -0.61
SHG1P38337 YDJ1YNL064C 1230 nt11.19□□□□□ -0.62
SHG1P38337 YJR018WYJR018W 363 nt11.18□□□□□ -0.62
SHG1P38337 BDF1YLR399C 2061 nt11.18□□□□□ -0.62
SHG1P38337 MEP2YNL142W 1500 nt11.16□□□□□ -0.62
SHG1P38337 SCR1SCR1 522 nt11.14□□□□□ -0.63
SHG1P38337 DAL1YIR027C 1383 nt11.04□□□□□ -0.64
SHG1P38337 TAT1YBR069C 1860 nt11.04□□□□□ -0.64
SHG1P38337 GAR1YHR089C 618 nt11.02□□□□□ -0.65
SHG1P38337 FIS1YIL065C 468 nt11.01□□□□□ -0.65
SHG1P38337 FPR4YLR449W 1179 nt11□□□□□ -0.65
SHG1P38337 FPS1YLL043W 2010 nt11□□□□□ -0.65
SHG1P38337 YMR090WYMR090W 684 nt10.93□□□□□ -0.66
SHG1P38337 INM2YDR287W 879 nt10.91□□□□□ -0.66
SHG1P38337 PHO4YFR034C 939 nt10.91□□□□□ -0.66
SHG1P38337 YPS1YLR120C 1710 nt10.9□□□□□ -0.66
SHG1P38337 RRN5YLR141W 1092 nt10.9□□□□□ -0.66
SHG1P38337 DCW1YKL046C 1350 nt10.9□□□□□ -0.67
SHG1P38337 YHR165W-AYHR165W-A 312 nt10.89□□□□□ -0.67
SHG1P38337 RPP2BYDR382W 333 nt10.88□□□□□ -0.67
SHG1P38337 YJL225CYJL225C 5277 nt10.81□□□□□ -0.68
SHG1P38337 EMI2YDR516C 1503 nt10.8□□□□□ -0.68
SHG1P38337 YBR220CYBR220C 1683 nt10.78□□□□□ -0.68
SHG1P38337 YDR095CYDR095C 411 nt10.74□□□□□ -0.69
SHG1P38337 YJR120WYJR120W 351 nt10.72□□□□□ -0.69
SHG1P38337 TIR1YER011W 765 nt10.69□□□□□ -0.7
SHG1P38337 YDL221WYDL221W 552 nt10.68□□□□□ -0.7
SHG1P38337 YER088W-BYER088W-B 147 nt10.68□□□□□ -0.7
SHG1P38337 SSA1YAL005C 1929 nt10.68□□□□□ -0.7
SHG1P38337 YBL100CYBL100C 315 nt10.67□□□□□ -0.7
SHG1P38337 SDH1YKL148C 1923 nt10.66□□□□□ -0.7
SHG1P38337 SEC11YIR022W 504 nt10.62□□□□□ -0.71
SHG1P38337 PCH2YBR186W 1695 nt10.58□□□□□ -0.72
SHG1P38337 ALF1YNL148C 765 nt10.57□□□□□ -0.72
SHG1P38337 RPP2AYOL039W 321 nt10.57□□□□□ -0.72
SHG1P38337 RSB1YOR049C 1065 nt10.55□□□□□ -0.72
SHG1P38337 GUT2YIL155C 1950 nt10.52□□□□□ -0.73
SHG1P38337 SCC4YER147C 1875 nt10.51□□□□□ -0.73
SHG1P38337 CAC2YML102W 1407 nt10.5□□□□□ -0.73
SHG1P38337 FUN26YAL022C 1554 nt10.5□□□□□ -0.73
SHG1P38337 PTP1YDL230W 1008 nt10.47□□□□□ -0.73
SHG1P38337 BDH2YAL061W 1254 nt10.47□□□□□ -0.73
SHG1P38337 ATS1YAL020C 1002 nt10.45□□□□□ -0.74
SHG1P38337 TRM9YML014W 840 nt10.41□□□□□ -0.74
SHG1P38337 RDN37-1RDN37-1 5354 nt10.4□□□□□ -0.75
SHG1P38337 RDN37-2RDN37-2 5354 nt10.4□□□□□ -0.75
SHG1P38337 SUF2tP(AGG)C 72 nt10.36□□□□□ -0.75
SHG1P38337 SUF10tP(AGG)N 72 nt10.36□□□□□ -0.75
SHG1P38337 IRC15YPL017C 1500 nt10.36□□□□□ -0.75
SHG1P38337 UME6YDR207C 2511 nt10.35□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms