RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C STD1Q02794 444 aa2.11□□□□□ -2.07
SHE2YKL130C RLI1Q03195 608 aaKnown RBP2.11□□□□□ -2.07
SHE2YKL130C BET5Q03630 159 aa2.11□□□□□ -2.07
SHE2YKL130C URC2Q04411 772 aa2.11□□□□□ -2.07
SHE2YKL130C RRP9Q06506 573 aaKnown RBP2.11□□□□□ -2.07
SHE2YKL130C PEX27Q08580 376 aa2.11□□□□□ -2.07
SHE2YKL130C TIM18Q08749 192 aa2.11□□□□□ -2.07
SHE2YKL130C PKH2Q12236 1081 aaKnown RBP2.11□□□□□ -2.07
SHE2YKL130C SFG1Q12507 346 aa2.11□□□□□ -2.07
SHE2YKL130C TEF1P02994 458 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C RPC40P07703 335 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C IMA3P0CW40 589 aa2.1□□□□□ -2.07
SHE2YKL130C IMA4P0CW41 589 aa2.1□□□□□ -2.07
SHE2YKL130C ARF1P11076 181 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C TIP1P27654 210 aaPredicted RBP2.1□□□□□ -2.07
SHE2YKL130C PSO2P30620 661 aa2.1□□□□□ -2.07
SHE2YKL130C GLC7P32598 312 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C SKN1P33336 771 aa2.1□□□□□ -2.07
SHE2YKL130C ATP3P38077 311 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C SPP381P38282 291 aaPredicted RBP2.1□□□□□ -2.07
SHE2YKL130C HAT2P39984 401 aa2.1□□□□□ -2.07
SHE2YKL130C SHO1P40073 367 aa2.1□□□□□ -2.07
SHE2YKL130C MMF1P40185 145 aaKnown RBP2.1□□□□□ -2.07
SHE2YKL130C ALG8P40351 577 aa2.1□□□□□ -2.07
SHE2YKL130C IKS1P47042 667 aa2.1□□□□□ -2.07
SHE2YKL130C BOR1P53838 576 aa2.1□□□□□ -2.07
SHE2YKL130C RPM2Q02773 1202 aa2.1□□□□□ -2.07
SHE2YKL130C MRP51Q02950 344 aa2.1□□□□□ -2.07
SHE2YKL130C VTI1Q04338 217 aa2.1□□□□□ -2.07
SHE2YKL130C YMR310CQ04867 317 aaPredicted RBP2.1□□□□□ -2.07
SHE2YKL130C SNT309Q06091 175 aaPredicted RBP2.1□□□□□ -2.07
SHE2YKL130C IMA2Q08295 589 aa2.1□□□□□ -2.07
SHE2YKL130C YPR022CQ12139 1133 aa2.1□□□□□ -2.07
SHE2YKL130C RNH203Q12338 110 aa2.1□□□□□ -2.07
SHE2YKL130C CEX1Q12453 761 aa2.1□□□□□ -2.07
SHE2YKL130C RMD5Q12508 421 aa2.1□□□□□ -2.07
SHE2YKL130C RPL12AP0CX53 165 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C RPL12BP0CX54 165 aa2.09□□□□□ -2.07
SHE2YKL130C MAS1P10507 462 aa2.09□□□□□ -2.07
SHE2YKL130C SAM1P10659 382 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C GCD2P12754 651 aaPredicted RBP2.09□□□□□ -2.07
SHE2YKL130C MTF1P14908 341 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C SPO12P17123 173 aa2.09□□□□□ -2.07
SHE2YKL130C SAG1P20840 650 aa2.09□□□□□ -2.07
SHE2YKL130C HMX1P32339 317 aa2.09□□□□□ -2.07
SHE2YKL130C SSE1P32589 693 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C COX13P32799 129 aa2.09□□□□□ -2.07
SHE2YKL130C PTR2P32901 601 aa2.09□□□□□ -2.07
SHE2YKL130C DOA1P36037 715 aa2.09□□□□□ -2.07
SHE2YKL130C PCH2P38126 564 aa2.09□□□□□ -2.07
SHE2YKL130C TIF5P38431 405 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C STP2P38704 541 aa2.09□□□□□ -2.07
SHE2YKL130C MST28P39552 234 aa2.09□□□□□ -2.07
SHE2YKL130C ATM1P40416 690 aa2.09□□□□□ -2.07
SHE2YKL130C SNL1P40548 159 aa2.09□□□□□ -2.07
SHE2YKL130C SPG5P42933 373 aa2.09□□□□□ -2.07
SHE2YKL130C LAM5P43560 674 aa2.09□□□□□ -2.07
SHE2YKL130C STE24P47154 453 aa2.09□□□□□ -2.07
SHE2YKL130C PHB2P50085 310 aa2.09□□□□□ -2.07
SHE2YKL130C POP6P53218 158 aa2.09□□□□□ -2.07
SHE2YKL130C RRP46P53256 223 aaPredicted RBP2.09□□□□□ -2.07
SHE2YKL130C ERV25P54837 211 aaKnown RBP2.09□□□□□ -2.07
SHE2YKL130C VPS20Q04272 221 aa2.09□□□□□ -2.07
SHE2YKL130C ECM7Q06200 448 aa2.09□□□□□ -2.07
SHE2YKL130C BSC6Q08280 497 aa2.09□□□□□ -2.07
SHE2YKL130C YPL199CQ08954 240 aa2.09□□□□□ -2.07
SHE2YKL130C SRL2Q12020 392 aa2.09□□□□□ -2.07
SHE2YKL130C YIL002W-AQ3E7Z5 69 aa2.09□□□□□ -2.07
SHE2YKL130C LTE1P07866 1435 aa2.08□□□□□ -2.08
SHE2YKL130C PEP1P32319 1579 aa2.08□□□□□ -2.08
SHE2YKL130C CBP2P03874 630 aaPredicted RBP2.08□□□□□ -2.08
SHE2YKL130C OPI3P05375 206 aa2.08□□□□□ -2.08
SHE2YKL130C CDC37P06101 506 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C ATP1P07251 545 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C RNR2P09938 399 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C ATR1P13090 542 aa2.08□□□□□ -2.08
SHE2YKL130C GRR1P24814 1151 aa2.08□□□□□ -2.08
SHE2YKL130C PET18P25362 215 aa2.08□□□□□ -2.08
SHE2YKL130C MSK1P32048 576 aa2.08□□□□□ -2.08
SHE2YKL130C EFB1P32471 206 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C NDC1P32500 655 aa2.08□□□□□ -2.08
SHE2YKL130C SKT5P34226 696 aa2.08□□□□□ -2.08
SHE2YKL130C KKQ8P36004 724 aa2.08□□□□□ -2.08
SHE2YKL130C MRPL40P36534 297 aa2.08□□□□□ -2.08
SHE2YKL130C LIN1P38852 340 aaPredicted RBP2.08□□□□□ -2.08
SHE2YKL130C YHR177WP38867 453 aa2.08□□□□□ -2.08
SHE2YKL130C SSO2P39926 295 aa2.08□□□□□ -2.08
SHE2YKL130C RTT105P40063 208 aa2.08□□□□□ -2.08
SHE2YKL130C GCD10P41814 478 aa2.08□□□□□ -2.08
SHE2YKL130C YPI1P43587 155 aa2.08□□□□□ -2.08
SHE2YKL130C RTT101P47050 842 aa2.08□□□□□ -2.08
SHE2YKL130C AVT4P50944 713 aa2.08□□□□□ -2.08
SHE2YKL130C CAF40P53829 373 aa2.08□□□□□ -2.08
SHE2YKL130C ARK1P53974 638 aa2.08□□□□□ -2.08
SHE2YKL130C PIR3Q03180 325 aa2.08□□□□□ -2.08
SHE2YKL130C YMR181CQ03231 154 aa2.08□□□□□ -2.08
SHE2YKL130C ERP1Q05359 219 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C HCR1Q05775 265 aaKnown RBP2.08□□□□□ -2.08
SHE2YKL130C LDS2Q08218 356 aa2.08□□□□□ -2.08
SHE2YKL130C TPT1Q12272 230 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms