RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	RRN11	Q04712	507 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	RAX1	Q08760	435 aa		4.13	□□□□□ -1.75
YPK3	YBR028C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YPK3	YBR028C	CHK1	P38147	527 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	WSS1	P38838	269 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	MMF1	P40185	145 aa	Known RBP	4.12	□□□□□ -1.75
YPK3	YBR028C	EPL1	P43572	832 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	TOS3	P43637	560 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	ASN2	P49090	572 aa	Known RBP	4.12	□□□□□ -1.75
YPK3	YBR028C	CCE1	Q03702	353 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	URC2	Q04411	772 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	IPK1	Q06667	281 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	NOP6	Q07623	225 aa	Known RBP	4.12	□□□□□ -1.75
YPK3	YBR028C	SMF3	Q12078	473 aa	Predicted RBP	4.12	□□□□□ -1.75
YPK3	YBR028C	NCA2	Q12374	616 aa		4.12	□□□□□ -1.75
YPK3	YBR028C	SPT15	P13393	240 aa	Known RBP	4.11	□□□□□ -1.75
YPK3	YBR028C	NAM9	P27929	486 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	YBL059W	P34224	193 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	LAS1	P36146	502 aa	Predicted RBP	4.11	□□□□□ -1.75
YPK3	YBR028C	SPP381	P38282	291 aa	Predicted RBP	4.11	□□□□□ -1.75
YPK3	YBR028C	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	STE24	P47154	453 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	YGR016W	P53209	190 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	COS1	P53822	381 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	MRPL35	Q06678	367 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	CUE5	Q08412	411 aa	Known RBP	4.11	□□□□□ -1.75
YPK3	YBR028C	SPT7	P35177	1332 aa		4.11	□□□□□ -1.75
YPK3	YBR028C	RPL6B	P05739	176 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	RPS8A	P0CX39	200 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	RPS8B	P0CX40	200 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	CAP2	P13517	287 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	CBS2	P14905	389 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	EXG1	P23776	448 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	SDH3	P33421	198 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	DAD2	P36162	133 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	ATP3	P38077	311 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	NDT80	P38830	627 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	RPL6A	Q02326	176 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	PRP3	Q03338	469 aa	Predicted RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	YFH1	Q07540	174 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	TMS1	Q12116	473 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	YDR061W	Q12298	539 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	HHF1	P02309	103 aa	Known RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	PHA2	P32452	334 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	KAR9	P32526	644 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	RRP1	P35178	278 aa	Predicted RBP	4.1	□□□□□ -1.75
YPK3	YBR028C	MSG5	P38590	489 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	REE1	P40893	198 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	RTT102	P53330	157 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	HER2	Q03557	464 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	YDR286C	Q05530	114 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	YRM1	Q12340	786 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	SRN2	Q99176	213 aa		4.1	□□□□□ -1.75
YPK3	YBR028C	ATP1	P07251	545 aa	Known RBP	4.09	□□□□□ -1.75
YPK3	YBR028C	SLM5	P25345	492 aa	Known RBP	4.09	□□□□□ -1.75
YPK3	YBR028C	DEG1	P31115	442 aa	Known RBP	4.09	□□□□□ -1.75
YPK3	YBR028C	SBE22	P38814	852 aa		4.09	□□□□□ -1.75
YPK3	YBR028C	YPI1	P43587	155 aa		4.09	□□□□□ -1.75
YPK3	YBR028C	SSC1	P0CS90	654 aa	Known RBP	4.08	□□□□□ -1.76
YPK3	YBR028C	TPM1	P17536	199 aa	Known RBP	4.08	□□□□□ -1.76
YPK3	YBR028C	FAA1	P30624	700 aa	Known RBP	4.08	□□□□□ -1.76
YPK3	YBR028C	TOA2	P32774	122 aa		4.08	□□□□□ -1.76
YPK3	YBR028C	KAP104	P38217	918 aa	Known RBP	4.08	□□□□□ -1.76
YPK3	YBR028C	SIF2	P38262	535 aa		4.08	□□□□□ -1.76
YPK3	YBR028C	PTH1	P38876	190 aa	Known RBP	4.08	□□□□□ -1.76
YPK3	YBR028C	CAJ1	P39101	391 aa		4.08	□□□□□ -1.76
YPK3	YBR028C	SPG5	P42933	373 aa		4.08	□□□□□ -1.76
YPK3	YBR028C	ASA1	Q06822	443 aa		4.08	□□□□□ -1.76
YPK3	YBR028C	SCH9	P11792	824 aa	Known RBP	4.07	□□□□□ -1.76
YPK3	YBR028C	PHO84	P25297	587 aa	Known RBP	4.07	□□□□□ -1.76
YPK3	YBR028C	YGR117C	P53270	476 aa		4.07	□□□□□ -1.76
YPK3	YBR028C	RRN9	P53437	365 aa		4.07	□□□□□ -1.76
YPK3	YBR028C	CWC25	P53854	179 aa	Known RBP	4.07	□□□□□ -1.76
YPK3	YBR028C	CEX1	Q12453	761 aa		4.07	□□□□□ -1.76
YPK3	YBR028C	SFG1	Q12507	346 aa		4.07	□□□□□ -1.76
YPK3	YBR028C	POM152	P39685	1337 aa		4.07	□□□□□ -1.76
YPK3	YBR028C	UBA1	P22515	1024 aa	Known RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	YEF1	P32622	495 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	COX13	P32799	129 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	SKT5	P34226	696 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	GDT1	P38301	280 aa	Predicted RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	ATM1	P40416	690 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	DBP9	Q06218	594 aa	Known RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	MDM36	Q06820	579 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	AAD15	Q08361	143 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	PGC1	Q08959	321 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YPK3	YBR028C	TPK3	P05986	398 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	ARF1	P11076	181 aa	Known RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	ARO2	P28777	376 aa	Known RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	DPH5	P32469	300 aa	Predicted RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	MNS1	P32906	549 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YPK3	YBR028C	SPR6	Q01684	191 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	UTP6	Q02354	440 aa	Known RBP	4.06	□□□□□ -1.76
YPK3	YBR028C	NUP116	Q02630	1113 aa		4.06	□□□□□ -1.76
YPK3	YBR028C	RNA1	P11745	407 aa	Known RBP	4.05	□□□□□ -1.76
YPK3	YBR028C	POP5	P28005	173 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms