RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C RRP4P38792 359 aaKnown RBP3.74□□□□□ -1.81
RPN8YOR261C JLP2P40206 208 aa3.74□□□□□ -1.81
RPN8YOR261C ERB1Q04660 807 aaKnown RBP3.74□□□□□ -1.81
RPN8YOR261C SNT309Q06091 175 aaPredicted RBP3.74□□□□□ -1.81
RPN8YOR261C MMR1Q06324 491 aa3.74□□□□□ -1.81
RPN8YOR261C SRL2Q12020 392 aa3.74□□□□□ -1.81
RPN8YOR261C TY1B-AO13527 1196 aaKnown RBP3.73□□□□□ -1.81
RPN8YOR261C COX3P00420 269 aa3.73□□□□□ -1.81
RPN8YOR261C RVS161P25343 265 aaKnown RBP3.73□□□□□ -1.81
RPN8YOR261C TOM22P49334 152 aa3.73□□□□□ -1.81
RPN8YOR261C OAZ1Q02803 292 aa3.73□□□□□ -1.81
RPN8YOR261C URH1Q04179 340 aa3.73□□□□□ -1.81
RPN8YOR261C BCH1Q05029 724 aa3.73□□□□□ -1.81
RPN8YOR261C DCS1Q06151 350 aa3.73□□□□□ -1.81
RPN8YOR261C ADE4P04046 510 aaKnown RBP3.72□□□□□ -1.81
RPN8YOR261C CLN1P20437 546 aa3.72□□□□□ -1.81
RPN8YOR261C SLM4P38247 162 aa3.72□□□□□ -1.81
RPN8YOR261C CAK1P43568 368 aaPredicted RBP3.72□□□□□ -1.81
RPN8YOR261C SFH5P47008 294 aa3.72□□□□□ -1.81
RPN8YOR261C TIS11P47977 285 aa3.72□□□□□ -1.81
RPN8YOR261C RHO5P53879 331 aaKnown RBP3.72□□□□□ -1.81
RPN8YOR261C HOT1Q03213 719 aa3.72□□□□□ -1.81
RPN8YOR261C YLR345WQ06137 509 aa3.72□□□□□ -1.81
RPN8YOR261C ATG34Q12292 412 aa3.72□□□□□ -1.81
RPN8YOR261C ARO3P14843 370 aaKnown RBP3.71□□□□□ -1.82
RPN8YOR261C CLB1P24868 471 aa3.71□□□□□ -1.82
RPN8YOR261C TFB1P32776 642 aa3.71□□□□□ -1.82
RPN8YOR261C RRT2P38332 387 aa3.71□□□□□ -1.82
RPN8YOR261C DED81P38707 554 aaKnown RBP3.71□□□□□ -1.82
RPN8YOR261C YPS6P40583 537 aa3.71□□□□□ -1.82
RPN8YOR261C TCB2P48231 1178 aa3.71□□□□□ -1.82
RPN8YOR261C YGL039WP53183 348 aaKnown RBP3.71□□□□□ -1.82
RPN8YOR261C OCA2P53949 197 aa3.71□□□□□ -1.82
RPN8YOR261C PEX25Q02969 394 aa3.71□□□□□ -1.82
RPN8YOR261C YRM1Q12340 786 aa3.71□□□□□ -1.82
RPN8YOR261C WTM1Q12363 437 aaKnown RBP3.71□□□□□ -1.82
RPN8YOR261C POP5P28005 173 aa3.7□□□□□ -1.82
RPN8YOR261C SER3P40054 469 aa3.7□□□□□ -1.82
RPN8YOR261C BRO1P48582 844 aa3.7□□□□□ -1.82
RPN8YOR261C RPN9Q04062 393 aaKnown RBP3.7□□□□□ -1.82
RPN8YOR261C YMR027WQ04371 470 aa3.7□□□□□ -1.82
RPN8YOR261C MED2Q12124 431 aa3.7□□□□□ -1.82
RPN8YOR261C TPT1Q12272 230 aaKnown RBP3.7□□□□□ -1.82
RPN8YOR261C CPR2P23285 205 aa3.69□□□□□ -1.82
RPN8YOR261C CSE2P33308 149 aa3.69□□□□□ -1.82
RPN8YOR261C MTR10Q99189 972 aa3.69□□□□□ -1.82
RPN8YOR261C IMA3P0CW40 589 aa3.68□□□□□ -1.82
RPN8YOR261C IMA4P0CW41 589 aa3.68□□□□□ -1.82
RPN8YOR261C ASC1P38011 319 aaKnown RBP3.68□□□□□ -1.82
RPN8YOR261C VHS2P40463 436 aa3.68□□□□□ -1.82
RPN8YOR261C MDE1P47095 244 aa3.68□□□□□ -1.82
RPN8YOR261C SHY1P53266 389 aa3.68□□□□□ -1.82
RPN8YOR261C RMT2Q03305 412 aa3.68□□□□□ -1.82
RPN8YOR261C RRP9Q06506 573 aaKnown RBP3.68□□□□□ -1.82
RPN8YOR261C IRC25Q07951 179 aa3.68□□□□□ -1.82
RPN8YOR261C IMA2Q08295 589 aa3.68□□□□□ -1.82
RPN8YOR261C VPS54Q12071 889 aa3.68□□□□□ -1.82
RPN8YOR261C YCL068CP25593 260 aa3.67□□□□□ -1.82
RPN8YOR261C CHK1P38147 527 aa3.67□□□□□ -1.82
RPN8YOR261C SBE22P38814 852 aa3.67□□□□□ -1.82
RPN8YOR261C GAT2P40209 560 aa3.67□□□□□ -1.82
RPN8YOR261C SIM1P40472 476 aa3.67□□□□□ -1.82
RPN8YOR261C ZIM17P42844 174 aa3.67□□□□□ -1.82
RPN8YOR261C PRP42Q03776 544 aaKnown RBP3.67□□□□□ -1.82
RPN8YOR261C BSC6Q08280 497 aa3.67□□□□□ -1.82
RPN8YOR261C RAX1Q08760 435 aa3.67□□□□□ -1.82
RPN8YOR261C SNU66Q12420 587 aaPredicted RBP3.67□□□□□ -1.82
RPN8YOR261C HOM3P10869 527 aa3.66□□□□□ -1.82
RPN8YOR261C PHA2P32452 334 aa3.66□□□□□ -1.82
RPN8YOR261C RRP1P35178 278 aaPredicted RBP3.66□□□□□ -1.82
RPN8YOR261C YHR131CP38835 850 aa3.66□□□□□ -1.82
RPN8YOR261C YJR085CP47131 105 aaKnown RBP3.66□□□□□ -1.82
RPN8YOR261C NUP116Q02630 1113 aa3.66□□□□□ -1.82
RPN8YOR261C CCE1Q03702 353 aa3.66□□□□□ -1.82
RPN8YOR261C DBF4P32325 704 aa3.65□□□□□ -1.83
RPN8YOR261C MRPL10P36520 322 aa3.65□□□□□ -1.83
RPN8YOR261C YBR056WP38081 501 aa3.65□□□□□ -1.83
RPN8YOR261C STD1Q02794 444 aa3.65□□□□□ -1.83
RPN8YOR261C AIM32Q04689 311 aa3.65□□□□□ -1.83
RPN8YOR261C UAF30Q08747 228 aa3.65□□□□□ -1.83
RPN8YOR261C PLP2Q12017 286 aa3.65□□□□□ -1.83
RPN8YOR261C ISA2Q12425 185 aa3.65□□□□□ -1.83
RPN8YOR261C AHC1Q12433 566 aa3.65□□□□□ -1.83
RPN8YOR261C SOD1P00445 154 aaKnown RBP3.64□□□□□ -1.83
RPN8YOR261C PRS1P32895 427 aaKnown RBP3.64□□□□□ -1.83
RPN8YOR261C HEL1P36113 551 aa3.64□□□□□ -1.83
RPN8YOR261C ZTA1P38230 334 aaKnown RBP3.64□□□□□ -1.83
RPN8YOR261C MTQ1P53944 314 aa3.64□□□□□ -1.83
RPN8YOR261C MMT1Q03218 510 aa3.64□□□□□ -1.83
RPN8YOR261C TSA2Q04120 196 aa3.64□□□□□ -1.83
RPN8YOR261C AEP3Q12089 606 aa3.64□□□□□ -1.83
RPN8YOR261C MDH1P17505 334 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
RPN8YOR261C NUP2P32499 720 aa3.63□□□□□ -1.83
RPN8YOR261C YIL029CP40538 142 aa3.63□□□□□ -1.83
RPN8YOR261C CHS6P40955 746 aa3.63□□□□□ -1.83
RPN8YOR261C GAB1P41733 394 aa3.63□□□□□ -1.83
RPN8YOR261C COS1P53822 381 aa3.63□□□□□ -1.83
RPN8YOR261C RUP1Q12242 671 aa3.63□□□□□ -1.83
RPN8YOR261C IZH2Q12442 317 aa3.63□□□□□ -1.83
RPN8YOR261C EXG1P23776 448 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms