RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W IMA3P0CW40 589 aa3.67□□□□□ -1.82
VPS27YNR006W IMA4P0CW41 589 aa3.67□□□□□ -1.82
VPS27YNR006W SAR1P20606 190 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W ASF2P32448 525 aaPredicted RBP3.67□□□□□ -1.82
VPS27YNR006W SPR1P32603 445 aa3.67□□□□□ -1.82
VPS27YNR006W RAD24P32641 659 aa3.67□□□□□ -1.82
VPS27YNR006W PRS1P32895 427 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W PAD1P33751 242 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
VPS27YNR006W SBE22P38814 852 aa3.67□□□□□ -1.82
VPS27YNR006W PRP39P39682 629 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W HXT9P40885 567 aa3.67□□□□□ -1.82
VPS27YNR006W TRS85P46944 698 aa3.67□□□□□ -1.82
VPS27YNR006W BNA3P47039 444 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W PKP2P53170 491 aa3.67□□□□□ -1.82
VPS27YNR006W SMM1P53720 384 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W EAF7P53911 425 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W YVH1Q02256 364 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W NUP53Q03790 475 aa3.67□□□□□ -1.82
VPS27YNR006W MRPL35Q06678 367 aa3.67□□□□□ -1.82
VPS27YNR006W IMA2Q08295 589 aa3.67□□□□□ -1.82
VPS27YNR006W YPR022CQ12139 1133 aa3.67□□□□□ -1.82
VPS27YNR006W GIS3Q12418 502 aa3.67□□□□□ -1.82
VPS27YNR006W RRP12Q12754 1228 aaKnown RBP3.67□□□□□ -1.82
VPS27YNR006W BRR1Q99177 341 aaPredicted RBP3.67□□□□□ -1.82
VPS27YNR006W JIP3O13555 125 aa3.66□□□□□ -1.82
VPS27YNR006W OPI3P05375 206 aa3.66□□□□□ -1.82
VPS27YNR006W PEP5P12868 1029 aa3.66□□□□□ -1.82
VPS27YNR006W DBR1P24309 405 aaKnown RBP3.66□□□□□ -1.82
VPS27YNR006W RPS2P25443 254 aaKnown RBP3.66□□□□□ -1.82
VPS27YNR006W CYS4P32582 507 aaKnown RBP3.66□□□□□ -1.82
VPS27YNR006W IML3P38265 245 aa3.66□□□□□ -1.82
VPS27YNR006W YHR045WP38775 560 aa3.66□□□□□ -1.82
VPS27YNR006W RTR1P40084 226 aaPredicted RBP3.66□□□□□ -1.82
VPS27YNR006W MSS2P40990 351 aa3.66□□□□□ -1.82
VPS27YNR006W POP1P41812 875 aa3.66□□□□□ -1.82
VPS27YNR006W FMP33P46998 180 aa3.66□□□□□ -1.82
VPS27YNR006W MRK1P50873 501 aa3.66□□□□□ -1.82
VPS27YNR006W RET3P53600 189 aa3.66□□□□□ -1.82
VPS27YNR006W PET117Q02771 107 aa3.66□□□□□ -1.82
VPS27YNR006W TAF12Q03761 539 aa3.66□□□□□ -1.82
VPS27YNR006W PIG1Q06216 648 aa3.66□□□□□ -1.82
VPS27YNR006W DIB1Q06819 143 aaPredicted RBP3.66□□□□□ -1.82
VPS27YNR006W MED4Q12343 284 aa3.66□□□□□ -1.82
VPS27YNR006W RPL12AP0CX53 165 aaKnown RBP3.65□□□□□ -1.82
VPS27YNR006W RPL12BP0CX54 165 aa3.65□□□□□ -1.82
VPS27YNR006W BAR1P12630 587 aa3.65□□□□□ -1.82
VPS27YNR006W DAL2P25335 343 aa3.65□□□□□ -1.82
VPS27YNR006W ACH1P32316 526 aa3.65□□□□□ -1.82
VPS27YNR006W HXT1P32465 570 aa3.65□□□□□ -1.82
VPS27YNR006W ERG1P32476 496 aaKnown RBP3.65□□□□□ -1.82
VPS27YNR006W SUA5P32579 426 aa3.65□□□□□ -1.82
VPS27YNR006W IMP3P32899 183 aaPredicted RBP3.65□□□□□ -1.82
VPS27YNR006W ECT1P33412 323 aa3.65□□□□□ -1.82
VPS27YNR006W ROT2P38138 954 aa3.65□□□□□ -1.82
VPS27YNR006W RTC2P38279 296 aa3.65□□□□□ -1.82
VPS27YNR006W YER085CP40058 173 aa3.65□□□□□ -1.82
VPS27YNR006W LCP5P40079 357 aaPredicted RBP3.65□□□□□ -1.82
VPS27YNR006W SEC9P40357 651 aa3.65□□□□□ -1.82
VPS27YNR006W STE24P47154 453 aa3.65□□□□□ -1.82
VPS27YNR006W GIP3Q03016 1276 aa3.65□□□□□ -1.82
VPS27YNR006W SRL4Q03085 281 aa3.65□□□□□ -1.82
VPS27YNR006W URH1Q04179 340 aa3.65□□□□□ -1.82
VPS27YNR006W AAD15Q08361 143 aa3.65□□□□□ -1.82
VPS27YNR006W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
VPS27YNR006W RPL18AP0CX49 186 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W RPL18BP0CX50 186 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W CDC43P18898 376 aa3.64□□□□□ -1.83
VPS27YNR006W MSK1P32048 576 aa3.64□□□□□ -1.83
VPS27YNR006W ARC19P33204 171 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
VPS27YNR006W RPC25P35718 212 aa3.64□□□□□ -1.83
VPS27YNR006W OCT1P35999 772 aa3.64□□□□□ -1.83
VPS27YNR006W CAB3P36076 571 aa3.64□□□□□ -1.83
VPS27YNR006W YAL037WP39728 267 aa3.64□□□□□ -1.83
VPS27YNR006W LOH1P47055 219 aa3.64□□□□□ -1.83
VPS27YNR006W TOS2P50078 622 aa3.64□□□□□ -1.83
VPS27YNR006W YIF1P53845 314 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W YNL260CP53846 198 aa3.64□□□□□ -1.83
VPS27YNR006W YDR387CQ04162 555 aa3.64□□□□□ -1.83
VPS27YNR006W AIM33Q04516 312 aa3.64□□□□□ -1.83
VPS27YNR006W MDM36Q06820 579 aa3.64□□□□□ -1.83
VPS27YNR006W SYO1Q07395 620 aa3.64□□□□□ -1.83
VPS27YNR006W NRT1Q08485 598 aa3.64□□□□□ -1.83
VPS27YNR006W YRM1Q12340 786 aa3.64□□□□□ -1.83
VPS27YNR006W RKM5Q12367 367 aa3.64□□□□□ -1.83
VPS27YNR006W CFT1Q06632 1357 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W GDH1P07262 454 aaKnown RBP3.64□□□□□ -1.83
VPS27YNR006W AQY1P0CD91 305 aa3.64□□□□□ -1.83
VPS27YNR006W RAD57P25301 460 aa3.64□□□□□ -1.83
VPS27YNR006W CTR86P25355 563 aa3.64□□□□□ -1.83
VPS27YNR006W KRE6P32486 720 aa3.64□□□□□ -1.83
VPS27YNR006W REC114P32841 428 aa3.64□□□□□ -1.83
VPS27YNR006W FET3P38993 636 aa3.64□□□□□ -1.83
VPS27YNR006W YJL070CP40361 888 aa3.64□□□□□ -1.83
VPS27YNR006W SHQ1P40486 507 aaPredicted RBP3.64□□□□□ -1.83
VPS27YNR006W GIM3P53900 129 aa3.64□□□□□ -1.83
VPS27YNR006W YPL014WQ02606 381 aa3.64□□□□□ -1.83
VPS27YNR006W GIS1Q03833 894 aa3.64□□□□□ -1.83
VPS27YNR006W RRN11Q04712 507 aa3.64□□□□□ -1.83
VPS27YNR006W IRC10Q08118 586 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms