RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	CUE5	Q08412	411 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	RRG1	Q12167	365 aa	Predicted RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	SFI1	Q12369	946 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	IZH2	Q12442	317 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	TY1B-A	O13527	1196 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	SCEI	P03882	235 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	CDC31	P06704	161 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	URA4	P20051	364 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	BRF1	P29056	596 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	NUP2	P32499	720 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	CHK1	P38147	527 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	RRN10	P38204	145 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	YAL037W	P39728	267 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	NOC2	P39744	710 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	JLP2	P40206	208 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	GAB1	P41733	394 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	YJR085C	P47131	105 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	SKO1	Q02100	647 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	TAF12	Q03761	539 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	YMR130W	Q04223	302 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	ROY1	Q04847	553 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	DCS1	Q06151	350 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	RKM1	Q08961	583 aa	Predicted RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	AHC1	Q12433	566 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	PGA3	Q12746	312 aa	Known RBP	0.93	□□□□□ -2.26
NOP9	YJL010C	AFI1	Q99222	893 aa		0.93	□□□□□ -2.26
NOP9	YJL010C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
NOP9	YJL010C	YCL068C	P25593	260 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	YCR051W	P25631	222 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	TFB1	P32776	642 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	SWE1	P32944	819 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	BYE1	P36106	594 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	MRP21	P38175	177 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	SBE22	P38814	852 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	COX14	P39103	70 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	MIG3	P39943	394 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	UTP18	P40362	594 aa	Predicted RBP	0.92	□□□□□ -2.26
NOP9	YJL010C	BIR1	P47134	954 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	SRB7	P47822	140 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	OCA2	P53949	197 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	KAP120	Q02932	1032 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	CCE1	Q03702	353 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	DON1	Q05610	365 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	LIP2	Q06005	328 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	NDE2	Q07500	545 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	SRL2	Q12020	392 aa		0.92	□□□□□ -2.26
NOP9	YJL010C	SMF3	Q12078	473 aa	Predicted RBP	0.92	□□□□□ -2.26
NOP9	YJL010C	IMA3	P0CW40	589 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	IMA4	P0CW41	589 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	DBF4	P32325	704 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	IES6	P32617	166 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ATP3	P38077	311 aa	Known RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	RTC2	P38279	296 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	DFG10	P40526	253 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	YFR057W	P43625	151 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	MRM2	P53123	320 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	BNI5	P53890	448 aa	Known RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	ALF1	P53904	254 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	TSA2	Q04120	196 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	IMA2	Q08295	589 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	PLP2	Q12017	286 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	BUG1	Q12191	341 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	TPT1	Q12272	230 aa	Known RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	ATG34	Q12292	412 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	SCM3	Q12334	223 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	SNU66	Q12420	587 aa	Predicted RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	MSI1	P13712	422 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	AAT2	P23542	418 aa	Known RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	GEX1	P25596	615 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ERV1	P27882	189 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	NFU1	P32860	256 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	RRP1	P35178	278 aa	Predicted RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	LSM5	P40089	93 aa	Known RBP	0.91	□□□□□ -2.26
NOP9	YJL010C	APJ1	P53940	528 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	STD1	Q02794	444 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ACL4	Q03771	387 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	RIF2	Q06208	395 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	RAX1	Q08760	435 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	VPS54	Q12071	889 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	JID1	Q12350	301 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ISA2	Q12425	185 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	YDL012C	Q12489	107 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ISN1	Q99312	450 aa		0.91	□□□□□ -2.26
NOP9	YJL010C	ADE4	P04046	510 aa	Known RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	EXG1	P23776	448 aa	Known RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	SPT10	P35208	640 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	MID2	P36027	376 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	SLM4	P38247	162 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	OXA1	P39952	402 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	MAM33	P40513	266 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	HAC1	P41546	238 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	EGT2	P42835	1041 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	LCB3	P47013	409 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	RRP46	P53256	223 aa	Predicted RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	YGR250C	P53316	781 aa	Known RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	HOT1	Q03213	719 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	RTN1	Q04947	295 aa	Known RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	SNT309	Q06091	175 aa	Predicted RBP	0.9	□□□□□ -2.27
NOP9	YJL010C	MMR1	Q06324	491 aa		0.9	□□□□□ -2.27
NOP9	YJL010C	RRP9	Q06506	573 aa	Known RBP	0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms