RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W SPT20P50875 604 aa3.55□□□□□ -1.84
SPT6YGR116W YMR279CQ03263 540 aa3.55□□□□□ -1.84
SPT6YGR116W YDR131CQ03899 556 aa3.55□□□□□ -1.84
SPT6YGR116W YMR087WQ04299 284 aa3.55□□□□□ -1.84
SPT6YGR116W RSC58Q07979 502 aa3.55□□□□□ -1.84
SPT6YGR116W CYC1P00044 109 aaPredicted RBP3.54□□□□□ -1.84
SPT6YGR116W PRC1P00729 532 aa3.54□□□□□ -1.84
SPT6YGR116W MSM1P22438 575 aa3.54□□□□□ -1.84
SPT6YGR116W STB5P38699 743 aa3.54□□□□□ -1.84
SPT6YGR116W YAP1801P38856 637 aa3.54□□□□□ -1.84
SPT6YGR116W HIS6P40545 261 aa3.54□□□□□ -1.84
SPT6YGR116W YJL218WP40892 196 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W HXT16P47185 567 aa3.54□□□□□ -1.84
SPT6YGR116W PPT1P53043 513 aa3.54□□□□□ -1.84
SPT6YGR116W SNZ1Q03148 297 aa3.54□□□□□ -1.84
SPT6YGR116W GOT1Q03554 138 aa3.54□□□□□ -1.84
SPT6YGR116W SKI7Q08491 747 aaPredicted RBP3.54□□□□□ -1.84
SPT6YGR116W SNF8Q12483 233 aa3.54□□□□□ -1.84
SPT6YGR116W LAT1P12695 482 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W UNG1P12887 359 aa3.54□□□□□ -1.84
SPT6YGR116W FUS3P16892 353 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W HOP1P20050 605 aa3.54□□□□□ -1.84
SPT6YGR116W SNC1P31109 117 aa3.54□□□□□ -1.84
SPT6YGR116W LST4P34239 828 aa3.54□□□□□ -1.84
SPT6YGR116W APD1P38281 316 aa3.54□□□□□ -1.84
SPT6YGR116W RGA1P39083 1007 aa3.54□□□□□ -1.84
SPT6YGR116W VRG4P40107 337 aa3.54□□□□□ -1.84
SPT6YGR116W GTT1P40582 234 aa3.54□□□□□ -1.84
SPT6YGR116W MEP2P41948 499 aa3.54□□□□□ -1.84
SPT6YGR116W IRC7P43623 340 aa3.54□□□□□ -1.84
SPT6YGR116W NRD1P53617 575 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SPT6YGR116W CTK1Q03957 528 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W TRM8Q12009 286 aa3.54□□□□□ -1.84
SPT6YGR116W YCR099CP25657 155 aa3.54□□□□□ -1.84
SPT6YGR116W VMA5P31412 392 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W ACB1P31787 87 aa3.54□□□□□ -1.84
SPT6YGR116W AIM26P32858 118 aa3.54□□□□□ -1.84
SPT6YGR116W CTF13P35203 478 aa3.54□□□□□ -1.84
SPT6YGR116W MRPL7P36519 292 aa3.54□□□□□ -1.84
SPT6YGR116W QDR2P40474 542 aa3.54□□□□□ -1.84
SPT6YGR116W BIT61P47041 543 aa3.54□□□□□ -1.84
SPT6YGR116W GCV1P48015 400 aa3.54□□□□□ -1.84
SPT6YGR116W GPG1P53130 126 aa3.54□□□□□ -1.84
SPT6YGR116W HHO1P53551 258 aa3.54□□□□□ -1.84
SPT6YGR116W LCB4Q12246 624 aa3.54□□□□□ -1.84
SPT6YGR116W ARP7Q12406 477 aa3.54□□□□□ -1.84
SPT6YGR116W RMD5Q12508 421 aa3.54□□□□□ -1.84
SPT6YGR116W CMC2Q3E7A4 109 aa3.54□□□□□ -1.84
SPT6YGR116W UBR2Q07963 1872 aa3.54□□□□□ -1.84
SPT6YGR116W FUM1P08417 488 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W DHR2P36009 735 aaPredicted RBP3.54□□□□□ -1.84
SPT6YGR116W AHP1P38013 176 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W ARP1P38696 384 aa3.54□□□□□ -1.84
SPT6YGR116W IMD2P38697 523 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W SLX8P40072 274 aa3.54□□□□□ -1.84
SPT6YGR116W MEP1P40260 492 aa3.54□□□□□ -1.84
SPT6YGR116W PSA1P41940 361 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W LSB6P42951 607 aa3.54□□□□□ -1.84
SPT6YGR116W CAK1P43568 368 aaPredicted RBP3.54□□□□□ -1.84
SPT6YGR116W CAF16P43569 289 aa3.54□□□□□ -1.84
SPT6YGR116W ULI1P43604 169 aa3.54□□□□□ -1.84
SPT6YGR116W SRB7P47822 140 aa3.54□□□□□ -1.84
SPT6YGR116W PHB2P50085 310 aa3.54□□□□□ -1.84
SPT6YGR116W MPC1P53157 130 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W PEF1P53238 335 aa3.54□□□□□ -1.84
SPT6YGR116W RAD34Q06665 692 aa3.54□□□□□ -1.84
SPT6YGR116W SWC7Q06707 132 aa3.54□□□□□ -1.84
SPT6YGR116W YDR056CQ12025 205 aa3.54□□□□□ -1.84
SPT6YGR116W YOR283WQ12040 230 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W SIA1Q12212 622 aa3.54□□□□□ -1.84
SPT6YGR116W TIF6Q12522 245 aaKnown RBP3.54□□□□□ -1.84
SPT6YGR116W YEL009C-AA0A023PZF2 135 aa3.53□□□□□ -1.84
SPT6YGR116W HTA1P04911 132 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W RPL17AP05740 184 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W CIT2P08679 460 aa3.53□□□□□ -1.84
SPT6YGR116W GAC1P28006 793 aa3.53□□□□□ -1.84
SPT6YGR116W OAC1P32332 324 aa3.53□□□□□ -1.84
SPT6YGR116W SHP1P34223 423 aa3.53□□□□□ -1.84
SPT6YGR116W SHE2P36068 246 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SPT6YGR116W RTC2P38279 296 aa3.53□□□□□ -1.84
SPT6YGR116W RRP4P38792 359 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W ACO2P39533 789 aa3.53□□□□□ -1.84
SPT6YGR116W PAN6P40459 309 aa3.53□□□□□ -1.84
SPT6YGR116W OPT1P40897 799 aa3.53□□□□□ -1.84
SPT6YGR116W YFL066CP43538 392 aa3.53□□□□□ -1.84
SPT6YGR116W YJR030CP47101 745 aa3.53□□□□□ -1.84
SPT6YGR116W ERV29P53337 310 aa3.53□□□□□ -1.84
SPT6YGR116W SNX41Q04053 625 aa3.53□□□□□ -1.84
SPT6YGR116W RRN11Q04712 507 aa3.53□□□□□ -1.84
SPT6YGR116W ICT1Q12385 394 aa3.53□□□□□ -1.84
SPT6YGR116W PRM4Q12498 284 aa3.53□□□□□ -1.84
SPT6YGR116W SIS1P25294 352 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W PEX34P25584 144 aa3.53□□□□□ -1.84
SPT6YGR116W ITR1P30605 584 aa3.53□□□□□ -1.84
SPT6YGR116W ELO3P40319 345 aa3.53□□□□□ -1.84
SPT6YGR116W RFC4P40339 323 aaKnown RBP3.53□□□□□ -1.84
SPT6YGR116W PGD1P40356 397 aa3.53□□□□□ -1.84
SPT6YGR116W SCW11P53189 542 aa3.53□□□□□ -1.84
SPT6YGR116W FMP48P53233 369 aa3.53□□□□□ -1.84
SPT6YGR116W BUD17P53727 317 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms