Protein–RNA interactions for Protein: P36068

SHE2, SWI5-dependent HO expression protein 2, yeastyeast

Known RBP RIP-Chip data

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE2P36068 NSR1YGR159C 1245 nt17.99■□□□□ 0.47
SHE2P36068 YML009W-BYML009W-B 477 nt17.66■□□□□ 0.42
SHE2P36068 NOP1YDL014W 984 nt17.05■□□□□ 0.32
SHE2P36068 MDJ1YFL016C 1536 nt16.33■□□□□ 0.2
SHE2P36068 YKL036CYKL036C 393 nt15.27■□□□□ 0.04
SHE2P36068 YJL027CYJL027C 417 nt15.09■□□□□ 0.01
SHE2P36068 SRX1YKL086W 384 nt14.86□□□□□ -0.03
SHE2P36068 Q0297Q0297 156 nt14.74□□□□□ -0.05
SHE2P36068 DBP2YNL112W 1641 nt14.26□□□□□ -0.13
SHE2P36068 YBR190WYBR190W 312 nt14.11□□□□□ -0.15
SHE2P36068 YCR051WYCR051W 669 nt14.05□□□□□ -0.16
SHE2P36068 RTC3YHR087W 336 nt13.75□□□□□ -0.21
SHE2P36068 TRN1tP(UGG)A 72 nt13.69□□□□□ -0.22
SHE2P36068 SUF9tP(UGG)F 72 nt13.69□□□□□ -0.22
SHE2P36068 SUF8tP(UGG)H 72 nt13.69□□□□□ -0.22
SHE2P36068 tP(UGG)LtP(UGG)L 72 nt13.69□□□□□ -0.22
SHE2P36068 SUF7tP(UGG)M 72 nt13.69□□□□□ -0.22
SHE2P36068 tP(UGG)N1tP(UGG)N1 72 nt13.69□□□□□ -0.22
SHE2P36068 tP(UGG)N2tP(UGG)N2 72 nt13.69□□□□□ -0.22
SHE2P36068 tP(UGG)O1tP(UGG)O1 72 nt13.69□□□□□ -0.22
SHE2P36068 SUF11tP(UGG)O2 72 nt13.69□□□□□ -0.22
SHE2P36068 SCS3YGL126W 1143 nt13.63□□□□□ -0.23
SHE2P36068 CCC1YLR220W 969 nt13.53□□□□□ -0.24
SHE2P36068 RVS167YDR388W 1449 nt13.39□□□□□ -0.27
SHE2P36068 SSA3YBL075C 1950 nt13.33□□□□□ -0.28
SHE2P36068 RPP1BYDL130W 321 nt13.23□□□□□ -0.29
SHE2P36068 YOL085CYOL085C 342 nt13.22□□□□□ -0.29
SHE2P36068 SCJ1YMR214W 1134 nt13.14□□□□□ -0.31
SHE2P36068 PUT4YOR348C 1884 nt13.12□□□□□ -0.31
SHE2P36068 PKP1YIL042C 1185 nt13.04□□□□□ -0.32
SHE2P36068 tP(UGG)O3tP(UGG)O3 72 nt12.8□□□□□ -0.36
SHE2P36068 SHR5YOL110W 714 nt12.8□□□□□ -0.36
SHE2P36068 ARE1YCR048W 1833 nt12.74□□□□□ -0.37
SHE2P36068 URN1YPR152C 1398 nt12.69□□□□□ -0.38
SHE2P36068 PET122YER153C 765 nt12.66□□□□□ -0.38
SHE2P36068 POA1YBR022W 534 nt12.66□□□□□ -0.38
SHE2P36068 SAH1YER043C 1350 nt12.63□□□□□ -0.39
SHE2P36068 OPI9YLR338W 858 nt12.62□□□□□ -0.39
SHE2P36068 YHR049C-AYHR049C-A 297 nt12.58□□□□□ -0.4
SHE2P36068 DEP1YAL013W 1218 nt12.53□□□□□ -0.4
SHE2P36068 BSC6YOL137W 1494 nt12.48□□□□□ -0.41
SHE2P36068 RPN10YHR200W 807 nt12.47□□□□□ -0.41
SHE2P36068 SCR1SCR1 522 nt12.46□□□□□ -0.41
SHE2P36068 YDJ1YNL064C 1230 nt12.42□□□□□ -0.42
SHE2P36068 YNL208WYNL208W 600 nt12.34□□□□□ -0.43
SHE2P36068 PUN1YLR414C 792 nt12.27□□□□□ -0.45
SHE2P36068 BUD23YCR047C 828 nt12.25□□□□□ -0.45
SHE2P36068 RRN5YLR141W 1092 nt12.25□□□□□ -0.45
SHE2P36068 SPT5YML010W 3192 nt12.22□□□□□ -0.45
SHE2P36068 GAR1YHR089C 618 nt12.17□□□□□ -0.46
SHE2P36068 PTC2YER089C 1395 nt12.17□□□□□ -0.46
SHE2P36068 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
SHE2P36068 YJR018WYJR018W 363 nt12.09□□□□□ -0.47
SHE2P36068 ATS1YAL020C 1002 nt12.07□□□□□ -0.48
SHE2P36068 SSA4YER103W 1929 nt12.01□□□□□ -0.49
SHE2P36068 YER088W-BYER088W-B 147 nt12.01□□□□□ -0.49
SHE2P36068 RSB1YOR049C 1065 nt11.87□□□□□ -0.51
SHE2P36068 DAL1YIR027C 1383 nt11.84□□□□□ -0.51
SHE2P36068 FIS1YIL065C 468 nt11.84□□□□□ -0.51
SHE2P36068 TIR1YER011W 765 nt11.8□□□□□ -0.52
SHE2P36068 MEP2YNL142W 1500 nt11.78□□□□□ -0.52
SHE2P36068 FPR4YLR449W 1179 nt11.78□□□□□ -0.52
SHE2P36068 RPP2BYDR382W 333 nt11.77□□□□□ -0.53
SHE2P36068 YJR120WYJR120W 351 nt11.76□□□□□ -0.53
SHE2P36068 INM2YDR287W 879 nt11.75□□□□□ -0.53
SHE2P36068 SSA1YAL005C 1929 nt11.72□□□□□ -0.53
SHE2P36068 PHO4YFR034C 939 nt11.71□□□□□ -0.53
SHE2P36068 YPS1YLR120C 1710 nt11.65□□□□□ -0.54
SHE2P36068 BDF1YLR399C 2061 nt11.58□□□□□ -0.56
SHE2P36068 YHR165W-AYHR165W-A 312 nt11.55□□□□□ -0.56
SHE2P36068 DCW1YKL046C 1350 nt11.54□□□□□ -0.56
SHE2P36068 YBL100CYBL100C 315 nt11.54□□□□□ -0.56
SHE2P36068 YDR095CYDR095C 411 nt11.51□□□□□ -0.57
SHE2P36068 TAT1YBR069C 1860 nt11.44□□□□□ -0.58
SHE2P36068 BDH2YAL061W 1254 nt11.43□□□□□ -0.58
SHE2P36068 YMR090WYMR090W 684 nt11.43□□□□□ -0.58
SHE2P36068 EMI2YDR516C 1503 nt11.42□□□□□ -0.58
SHE2P36068 SRB2YHR041C 633 nt11.39□□□□□ -0.59
SHE2P36068 FUN26YAL022C 1554 nt11.38□□□□□ -0.59
SHE2P36068 YBR220CYBR220C 1683 nt11.35□□□□□ -0.59
SHE2P36068 ALF1YNL148C 765 nt11.34□□□□□ -0.59
SHE2P36068 YDL221WYDL221W 552 nt11.3□□□□□ -0.6
SHE2P36068 TRM9YML014W 840 nt11.3□□□□□ -0.6
SHE2P36068 RPP2AYOL039W 321 nt11.3□□□□□ -0.6
SHE2P36068 PTP1YDL230W 1008 nt11.27□□□□□ -0.61
SHE2P36068 PST2YDR032C 597 nt11.26□□□□□ -0.61
SHE2P36068 SDH1YKL148C 1923 nt11.25□□□□□ -0.61
SHE2P36068 CAC2YML102W 1407 nt11.24□□□□□ -0.61
SHE2P36068 LSM3YLR438C-A 270 nt11.22□□□□□ -0.61
SHE2P36068 CCT6YDR188W 1641 nt11.2□□□□□ -0.62
SHE2P36068 WWM1YFL010C 636 nt11.17□□□□□ -0.62
SHE2P36068 SUF2tP(AGG)C 72 nt11.17□□□□□ -0.62
SHE2P36068 SUF10tP(AGG)N 72 nt11.17□□□□□ -0.62
SHE2P36068 SIS1YNL007C 1059 nt11.16□□□□□ -0.62
SHE2P36068 SCC4YER147C 1875 nt11.11□□□□□ -0.63
SHE2P36068 IRC15YPL017C 1500 nt11.09□□□□□ -0.63
SHE2P36068 SEC11YIR022W 504 nt11.07□□□□□ -0.64
SHE2P36068 YFL021C-AYFL021C-A 855 nt11.05□□□□□ -0.64
SHE2P36068 YGR021WYGR021W 873 nt11.04□□□□□ -0.64
SHE2P36068 PCH2YBR186W 1695 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms