RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W HEL1P36113 551 aa1.21□□□□□ -2.22
CUL3YGR003W GIR2Q03768 265 aaPredicted RBP1.21□□□□□ -2.22
CUL3YGR003W RRP45Q05636 305 aaKnown RBP1.21□□□□□ -2.22
CUL3YGR003W MMR1Q06324 491 aa1.21□□□□□ -2.22
CUL3YGR003W INH1P01097 85 aa1.2□□□□□ -2.22
CUL3YGR003W YCR051WP25631 222 aa1.2□□□□□ -2.22
CUL3YGR003W ADK2P26364 225 aa1.2□□□□□ -2.22
CUL3YGR003W PHA2P32452 334 aa1.2□□□□□ -2.22
CUL3YGR003W NIP1P32497 812 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W BYE1P36106 594 aa1.2□□□□□ -2.22
CUL3YGR003W TOS2P50078 622 aa1.2□□□□□ -2.22
CUL3YGR003W BNS1P50084 137 aa1.2□□□□□ -2.22
CUL3YGR003W YGL138CP53122 345 aa1.2□□□□□ -2.22
CUL3YGR003W RHO5P53879 331 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W HAL1Q01766 294 aa1.2□□□□□ -2.22
CUL3YGR003W ACL4Q03771 387 aa1.2□□□□□ -2.22
CUL3YGR003W SCM3Q12334 223 aa1.2□□□□□ -2.22
CUL3YGR003W AFI1Q99222 893 aa1.2□□□□□ -2.22
CUL3YGR003W ADE4P04046 510 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W URA4P20051 364 aa1.2□□□□□ -2.22
CUL3YGR003W RPC53P25441 422 aa1.2□□□□□ -2.22
CUL3YGR003W PRS1P32895 427 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W BAT1P38891 393 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W MIG3P39943 394 aa1.2□□□□□ -2.22
CUL3YGR003W AIM10P39965 576 aaKnown RBP1.2□□□□□ -2.22
CUL3YGR003W TCB2P48231 1178 aa1.2□□□□□ -2.22
CUL3YGR003W SHY1P53266 389 aa1.2□□□□□ -2.22
CUL3YGR003W NUP116Q02630 1113 aa1.2□□□□□ -2.22
CUL3YGR003W TAF12Q03761 539 aa1.2□□□□□ -2.22
CUL3YGR003W SGT1Q08446 395 aa1.2□□□□□ -2.22
CUL3YGR003W IZH2Q12442 317 aa1.2□□□□□ -2.22
CUL3YGR003W CCH1P50077 2039 aa1.19□□□□□ -2.22
CUL3YGR003W SUP35P05453 685 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W NAT1P12945 854 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W DPH5P32469 300 aaPredicted RBP1.19□□□□□ -2.22
CUL3YGR003W NUP2P32499 720 aa1.19□□□□□ -2.22
CUL3YGR003W RRN10P38204 145 aa1.19□□□□□ -2.22
CUL3YGR003W PTI1P39927 425 aaPredicted RBP1.19□□□□□ -2.22
CUL3YGR003W UTP18P40362 594 aaPredicted RBP1.19□□□□□ -2.22
CUL3YGR003W GAB1P41733 394 aa1.19□□□□□ -2.22
CUL3YGR003W KAP120Q02932 1032 aa1.19□□□□□ -2.22
CUL3YGR003W ERB1Q04660 807 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W CLN1P20437 546 aa1.19□□□□□ -2.22
CUL3YGR003W EXG1P23776 448 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W YPS6P40583 537 aa1.19□□□□□ -2.22
CUL3YGR003W EGT2P42835 1041 aa1.19□□□□□ -2.22
CUL3YGR003W SFH5P47008 294 aa1.19□□□□□ -2.22
CUL3YGR003W MDE1P47095 244 aa1.19□□□□□ -2.22
CUL3YGR003W YGL039WP53183 348 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W SUB1P54000 292 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W SKO1Q02100 647 aa1.19□□□□□ -2.22
CUL3YGR003W CCE1Q03702 353 aa1.19□□□□□ -2.22
CUL3YGR003W URH1Q04179 340 aa1.19□□□□□ -2.22
CUL3YGR003W YMR027WQ04371 470 aa1.19□□□□□ -2.22
CUL3YGR003W DCS1Q06151 350 aa1.19□□□□□ -2.22
CUL3YGR003W MFG1Q07684 458 aa1.19□□□□□ -2.22
CUL3YGR003W CUE5Q08412 411 aaKnown RBP1.19□□□□□ -2.22
CUL3YGR003W CAP2P13517 287 aa1.18□□□□□ -2.22
CUL3YGR003W YCL068CP25593 260 aa1.18□□□□□ -2.22
CUL3YGR003W ASC1P38011 319 aaKnown RBP1.18□□□□□ -2.22
CUL3YGR003W CHK1P38147 527 aa1.18□□□□□ -2.22
CUL3YGR003W MRP21P38175 177 aa1.18□□□□□ -2.22
CUL3YGR003W SLM4P38247 162 aa1.18□□□□□ -2.22
CUL3YGR003W NTC20P38302 140 aaPredicted RBP1.18□□□□□ -2.22
CUL3YGR003W YHK8P38776 514 aa1.18□□□□□ -2.22
CUL3YGR003W TDA1Q03533 586 aa1.18□□□□□ -2.22
CUL3YGR003W DON1Q05610 365 aa1.18□□□□□ -2.22
CUL3YGR003W REX4Q08237 289 aa1.18□□□□□ -2.22
CUL3YGR003W RAX1Q08760 435 aa1.18□□□□□ -2.22
CUL3YGR003W PLP2Q12017 286 aa1.18□□□□□ -2.22
CUL3YGR003W ATG34Q12292 412 aa1.18□□□□□ -2.22
CUL3YGR003W HSP26P15992 214 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22 RIP-Chip
CUL3YGR003W FUR1P18562 216 aaKnown RBP1.17□□□□□ -2.22
CUL3YGR003W GPI16P38875 610 aa1.17□□□□□ -2.22
CUL3YGR003W TOM22P49334 152 aa1.17□□□□□ -2.22
CUL3YGR003W MRM2P53123 320 aa1.17□□□□□ -2.22
CUL3YGR003W PEX25Q02969 394 aa1.17□□□□□ -2.22
CUL3YGR003W RRP9Q06506 573 aaKnown RBP1.17□□□□□ -2.22
CUL3YGR003W SMF3Q12078 473 aaPredicted RBP1.17□□□□□ -2.22
CUL3YGR003W SPO7P18410 259 aa1.17□□□□□ -2.22
CUL3YGR003W CLB1P24868 471 aa1.17□□□□□ -2.22
CUL3YGR003W BRF1P29056 596 aa1.17□□□□□ -2.22
CUL3YGR003W PCF11P39081 626 aaPredicted RBP1.17□□□□□ -2.22
CUL3YGR003W YER186CP40101 306 aa1.17□□□□□ -2.22
CUL3YGR003W LCB3P47013 409 aa1.17□□□□□ -2.22
CUL3YGR003W PMT5P52867 743 aa1.17□□□□□ -2.22
CUL3YGR003W YGR018CP53211 109 aa1.17□□□□□ -2.22
CUL3YGR003W RPT4P53549 437 aaKnown RBP1.17□□□□□ -2.22
CUL3YGR003W YMR130WQ04223 302 aa1.17□□□□□ -2.22
CUL3YGR003W RIF2Q06208 395 aa1.17□□□□□ -2.22
CUL3YGR003W IRC25Q07951 179 aa1.17□□□□□ -2.22
CUL3YGR003W SSC1P0CS90 654 aaKnown RBP1.16□□□□□ -2.22
CUL3YGR003W MSI1P13712 422 aa1.16□□□□□ -2.22
CUL3YGR003W PDX1P16451 410 aa1.16□□□□□ -2.22
CUL3YGR003W ANR2P36090 516 aaPredicted RBP1.16□□□□□ -2.22
CUL3YGR003W MMS4P38257 691 aa1.16□□□□□ -2.22
CUL3YGR003W RTC2P38279 296 aa1.16□□□□□ -2.22
CUL3YGR003W STN1P38960 494 aa1.16□□□□□ -2.22
CUL3YGR003W HEM14P40012 539 aa1.16□□□□□ -2.22
CUL3YGR003W GAT2P40209 560 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms