RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	CUE5	Q08412	411 aa	Known RBP	2.78	□□□□□ -1.96
RSM18	YER050C	SCM3	Q12334	223 aa		2.78	□□□□□ -1.96
RSM18	YER050C	SNU66	Q12420	587 aa	Predicted RBP	2.78	□□□□□ -1.96
RSM18	YER050C	SPO12	P17123	173 aa		2.77	□□□□□ -1.97
RSM18	YER050C	FUR1	P18562	216 aa	Known RBP	2.77	□□□□□ -1.97
RSM18	YER050C	NUP2	P32499	720 aa		2.77	□□□□□ -1.97
RSM18	YER050C	NFU1	P32860	256 aa		2.77	□□□□□ -1.97
RSM18	YER050C	RRN10	P38204	145 aa		2.77	□□□□□ -1.97
RSM18	YER050C	YAL037W	P39728	267 aa		2.77	□□□□□ -1.97
RSM18	YER050C	AIM10	P39965	576 aa	Known RBP	2.77	□□□□□ -1.97
RSM18	YER050C	PHO86	P46956	311 aa		2.77	□□□□□ -1.97
RSM18	YER050C	ALF1	P53904	254 aa		2.77	□□□□□ -1.97
RSM18	YER050C	NUP116	Q02630	1113 aa		2.77	□□□□□ -1.97
RSM18	YER050C	DIS3	Q08162	1001 aa	Known RBP	2.77	□□□□□ -1.97
RSM18	YER050C	MED2	Q12124	431 aa		2.77	□□□□□ -1.97
RSM18	YER050C	JID1	Q12350	301 aa		2.77	□□□□□ -1.97
RSM18	YER050C	YCR051W	P25631	222 aa		2.76	□□□□□ -1.97
RSM18	YER050C	RRP1	P35178	278 aa	Predicted RBP	2.76	□□□□□ -1.97
RSM18	YER050C	COX14	P39103	70 aa		2.76	□□□□□ -1.97
RSM18	YER050C	UTP18	P40362	594 aa	Predicted RBP	2.76	□□□□□ -1.97
RSM18	YER050C	GAB1	P41733	394 aa		2.76	□□□□□ -1.97
RSM18	YER050C	YGR250C	P53316	781 aa	Known RBP	2.76	□□□□□ -1.97
RSM18	YER050C	YMR155W	Q03795	547 aa		2.76	□□□□□ -1.97
RSM18	YER050C	ARX1	Q03862	593 aa	Known RBP	2.76	□□□□□ -1.97
RSM18	YER050C	YMR130W	Q04223	302 aa		2.76	□□□□□ -1.97
RSM18	YER050C	SRL2	Q12020	392 aa		2.76	□□□□□ -1.97
RSM18	YER050C	TPT1	Q12272	230 aa	Known RBP	2.76	□□□□□ -1.97
RSM18	YER050C	URA4	P20051	364 aa		2.75	□□□□□ -1.97
RSM18	YER050C	RAD57	P25301	460 aa		2.75	□□□□□ -1.97
RSM18	YER050C	BRF1	P29056	596 aa		2.75	□□□□□ -1.97
RSM18	YER050C	CSE2	P33308	149 aa		2.75	□□□□□ -1.97
RSM18	YER050C	MID2	P36027	376 aa		2.75	□□□□□ -1.97
RSM18	YER050C	ATP3	P38077	311 aa	Known RBP	2.75	□□□□□ -1.97
RSM18	YER050C	YHR131C	P38835	850 aa		2.75	□□□□□ -1.97
RSM18	YER050C	DFG10	P40526	253 aa		2.75	□□□□□ -1.97
RSM18	YER050C	BRO1	P48582	844 aa		2.75	□□□□□ -1.97
RSM18	YER050C	RRG1	Q12167	365 aa	Predicted RBP	2.75	□□□□□ -1.97
RSM18	YER050C	ATG34	Q12292	412 aa		2.75	□□□□□ -1.97
RSM18	YER050C	IZH2	Q12442	317 aa		2.75	□□□□□ -1.97
RSM18	YER050C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
RSM18	YER050C	PRR1	P28708	518 aa		2.74	□□□□□ -1.97
RSM18	YER050C	TFB1	P32776	642 aa		2.74	□□□□□ -1.97
RSM18	YER050C	CHK1	P38147	527 aa		2.74	□□□□□ -1.97
RSM18	YER050C	MRP21	P38175	177 aa		2.74	□□□□□ -1.97
RSM18	YER050C	RRP4	P38792	359 aa	Known RBP	2.74	□□□□□ -1.97
RSM18	YER050C	ROY1	Q04847	553 aa		2.74	□□□□□ -1.97
RSM18	YER050C	DCS1	Q06151	350 aa		2.74	□□□□□ -1.97
RSM18	YER050C	RAX1	Q08760	435 aa		2.74	□□□□□ -1.97
RSM18	YER050C	PLP2	Q12017	286 aa		2.74	□□□□□ -1.97
RSM18	YER050C	AFI1	Q99222	893 aa		2.74	□□□□□ -1.97
RSM18	YER050C	YCL068C	P25593	260 aa		2.73	□□□□□ -1.97
RSM18	YER050C	GEX1	P25596	615 aa		2.73	□□□□□ -1.97
RSM18	YER050C	BYE1	P36106	594 aa		2.73	□□□□□ -1.97
RSM18	YER050C	YFR057W	P43625	151 aa		2.73	□□□□□ -1.97
RSM18	YER050C	HOT1	Q03213	719 aa		2.73	□□□□□ -1.97
RSM18	YER050C	TSA2	Q04120	196 aa		2.73	□□□□□ -1.97
RSM18	YER050C	CEX1	Q12453	761 aa		2.73	□□□□□ -1.97
RSM18	YER050C	AAT2	P23542	418 aa	Known RBP	2.72	□□□□□ -1.97
RSM18	YER050C	MPE1	P35728	441 aa	Known RBP	2.72	□□□□□ -1.97
RSM18	YER050C	RTC2	P38279	296 aa		2.72	□□□□□ -1.97
RSM18	YER050C	MAM33	P40513	266 aa		2.72	□□□□□ -1.97
RSM18	YER050C	YJR085C	P47131	105 aa	Known RBP	2.72	□□□□□ -1.97
RSM18	YER050C	CCE1	Q03702	353 aa		2.72	□□□□□ -1.97
RSM18	YER050C	SPC19	Q03954	165 aa		2.72	□□□□□ -1.97
RSM18	YER050C	RIF2	Q06208	395 aa		2.72	□□□□□ -1.97
RSM18	YER050C	RRP9	Q06506	573 aa	Known RBP	2.72	□□□□□ -1.97
RSM18	YER050C	TY1B-A	O13527	1196 aa	Known RBP	2.71	□□□□□ -1.98
RSM18	YER050C	MSI1	P13712	422 aa		2.71	□□□□□ -1.98
RSM18	YER050C	RPB5	P20434	215 aa		2.71	□□□□□ -1.98
RSM18	YER050C	MIG3	P39943	394 aa		2.71	□□□□□ -1.98
RSM18	YER050C	LSM5	P40089	93 aa	Known RBP	2.71	□□□□□ -1.98
RSM18	YER050C	HAC1	P41546	238 aa		2.71	□□□□□ -1.98
RSM18	YER050C	BIR1	P47134	954 aa		2.71	□□□□□ -1.98
RSM18	YER050C	MRM2	P53123	320 aa		2.71	□□□□□ -1.98
RSM18	YER050C	MMT1	Q03218	510 aa		2.71	□□□□□ -1.98
RSM18	YER050C	ACL4	Q03771	387 aa		2.71	□□□□□ -1.98
RSM18	YER050C	URH1	Q04179	340 aa		2.71	□□□□□ -1.98
RSM18	YER050C	RTN1	Q04947	295 aa	Known RBP	2.71	□□□□□ -1.98
RSM18	YER050C	LIP2	Q06005	328 aa		2.71	□□□□□ -1.98
RSM18	YER050C	LOT6	Q07923	191 aa		2.71	□□□□□ -1.98
RSM18	YER050C	YGK3	Q12222	375 aa	Predicted RBP	2.71	□□□□□ -1.98
RSM18	YER050C	ADE4	P04046	510 aa	Known RBP	2.7	□□□□□ -1.98
RSM18	YER050C	SPT10	P35208	640 aa		2.7	□□□□□ -1.98
RSM18	YER050C	SBE22	P38814	852 aa		2.7	□□□□□ -1.98
RSM18	YER050C	CAK1	P43568	368 aa	Predicted RBP	2.7	□□□□□ -1.98
RSM18	YER050C	OCA2	P53949	197 aa		2.7	□□□□□ -1.98
RSM18	YER050C	STD1	Q02794	444 aa		2.7	□□□□□ -1.98
RSM18	YER050C	MDM36	Q06820	579 aa		2.7	□□□□□ -1.98
RSM18	YER050C	CMS1	Q07897	291 aa	Known RBP	2.7	□□□□□ -1.98
RSM18	YER050C	SMC5	Q08204	1093 aa		2.7	□□□□□ -1.98
RSM18	YER050C	VPS54	Q12071	889 aa		2.7	□□□□□ -1.98
RSM18	YER050C	MTR10	Q99189	972 aa		2.7	□□□□□ -1.98
RSM18	YER050C	ISN1	Q99312	450 aa		2.7	□□□□□ -1.98
RSM18	YER050C	AIM24	P47127	394 aa		2.69	□□□□□ -1.98
RSM18	YER050C	SMF3	Q12078	473 aa	Predicted RBP	2.69	□□□□□ -1.98
RSM18	YER050C	NCA2	Q12374	616 aa		2.69	□□□□□ -1.98
RSM18	YER050C	EAF3	Q12432	401 aa		2.69	□□□□□ -1.98
RSM18	YER050C	HTZ1	Q12692	134 aa	Known RBP	2.69	□□□□□ -1.98
RSM18	YER050C	IMA3	P0CW40	589 aa		2.68	□□□□□ -1.98
RSM18	YER050C	IMA4	P0CW41	589 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms