RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	YLR345W	Q06137	509 aa		2.27	□□□□□ -2.05
RTR2	YDR066C	MMR1	Q06324	491 aa		2.27	□□□□□ -2.05
RTR2	YDR066C	YRM1	Q12340	786 aa		2.27	□□□□□ -2.05
RTR2	YDR066C	AFI1	Q99222	893 aa		2.27	□□□□□ -2.05
RTR2	YDR066C	CLN1	P20437	546 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	PCL1	P24867	279 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	RPC53	P25441	422 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	NIP1	P32497	812 aa	Known RBP	2.26	□□□□□ -2.05
RTR2	YDR066C	HEL1	P36113	551 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	MRPL10	P36520	322 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	RRN10	P38204	145 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	SER3	P40054	469 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	SRB7	P47822	140 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	RHO5	P53879	331 aa	Known RBP	2.26	□□□□□ -2.05
RTR2	YDR066C	KAP120	Q02932	1032 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	VPS72	Q03388	795 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	ERB1	Q04660	807 aa	Known RBP	2.26	□□□□□ -2.05
RTR2	YDR066C	DCS1	Q06151	350 aa		2.26	□□□□□ -2.05
RTR2	YDR066C	ADE4	P04046	510 aa	Known RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	ARO3	P14843	370 aa	Known RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	FUR1	P18562	216 aa	Known RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	UTH1	P36135	365 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	NTC20	P38302	140 aa	Predicted RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	STP2	P38704	541 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	SBE22	P38814	852 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	TCB2	P48231	1178 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	YGL039W	P53183	348 aa	Known RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	COS1	P53822	381 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	REX4	Q08237	289 aa		2.25	□□□□□ -2.05
RTR2	YDR066C	WTM1	Q12363	437 aa	Known RBP	2.25	□□□□□ -2.05
RTR2	YDR066C	CLC1	P17891	233 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	SLM4	P38247	162 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	SFH5	P47008	294 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	SHY1	P53266	389 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	URH1	Q04179	340 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	DON1	Q05610	365 aa		2.24	□□□□□ -2.05
RTR2	YDR066C	BRF1	P29056	596 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	PHA2	P32452	334 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	PCF11	P39081	626 aa	Predicted RBP	2.23	□□□□□ -2.05
RTR2	YDR066C	AIM10	P39965	576 aa	Known RBP	2.23	□□□□□ -2.05
RTR2	YDR066C	GAB1	P41733	394 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	TOM22	P49334	152 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	NUP116	Q02630	1113 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	ATG34	Q12292	412 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	HSP42	Q12329	375 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	SFI1	Q12369	946 aa		2.23	□□□□□ -2.05
RTR2	YDR066C	NAT1	P12945	854 aa	Known RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	SRV2	P17555	526 aa	Known RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	SPO7	P18410	259 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	CLB1	P24868	471 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	DPH5	P32469	300 aa	Predicted RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	PRS1	P32895	427 aa	Known RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	CHK1	P38147	527 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	MMS4	P38257	691 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	UTP18	P40362	594 aa	Predicted RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	YPS6	P40583	537 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	MDE1	P47095	244 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	TOS2	P50078	622 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	HAL1	Q01766	294 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	PEX25	Q02969	394 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	YMR130W	Q04223	302 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	YMR027W	Q04371	470 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	CUE5	Q08412	411 aa	Known RBP	2.22	□□□□□ -2.05
RTR2	YDR066C	RAX1	Q08760	435 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	IZH2	Q12442	317 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	YDL012C	Q12489	107 aa		2.22	□□□□□ -2.05
RTR2	YDR066C	PDX1	P16451	410 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	YCL068C	P25593	260 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	NUP2	P32499	720 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	BAT1	P38891	393 aa	Known RBP	2.21	□□□□□ -2.06
RTR2	YDR066C	PTI1	P39927	425 aa	Predicted RBP	2.21	□□□□□ -2.06
RTR2	YDR066C	MIG3	P39943	394 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	CAK1	P43568	368 aa	Predicted RBP	2.21	□□□□□ -2.06
RTR2	YDR066C	AIM32	Q04689	311 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	IRC25	Q07951	179 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	PLP2	Q12017	286 aa		2.21	□□□□□ -2.06
RTR2	YDR066C	REC107	P21651	314 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	EXG1	P23776	448 aa	Known RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	TFB1	P32776	642 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	JNM1	P36224	373 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	ASC1	P38011	319 aa	Known RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	VHS2	P40463	436 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	PGU1	P47180	361 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	BNS1	P50084	137 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	MRM2	P53123	320 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	RPT4	P53549	437 aa	Known RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	CCE1	Q03702	353 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	RRP9	Q06506	573 aa	Known RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	MFG1	Q07684	458 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	SMF3	Q12078	473 aa	Predicted RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	TPT1	Q12272	230 aa	Known RBP	2.2	□□□□□ -2.06
RTR2	YDR066C	MTR10	Q99189	972 aa		2.2	□□□□□ -2.06
RTR2	YDR066C	NAM2	P11325	894 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	CAP2	P13517	287 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.19	□□□□□ -2.06	not detected
RTR2	YDR066C	YBR056W	P38081	501 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	GPI16	P38875	610 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	GAT2	P40209	560 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	EGT2	P42835	1041 aa		2.19	□□□□□ -2.06
RTR2	YDR066C	LCB3	P47013	409 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms