RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	AEP3	Q12089	606 aa		5.34	□□□□□ -1.55
SIR2	YDL042C	MCK1	P21965	375 aa	Known RBP	5.34	□□□□□ -1.56
SIR2	YDL042C	PUT3	P25502	979 aa	Predicted RBP	5.34	□□□□□ -1.56
SIR2	YDL042C	YJL213W	P40896	331 aa		5.34	□□□□□ -1.56
SIR2	YDL042C	YJL132W	P47014	750 aa		5.34	□□□□□ -1.56
SIR2	YDL042C	POP6	P53218	158 aa		5.34	□□□□□ -1.56
SIR2	YDL042C	SPE3	Q12074	293 aa	Known RBP	5.34	□□□□□ -1.56
SIR2	YDL042C	MTR10	Q99189	972 aa		5.34	□□□□□ -1.56
SIR2	YDL042C	LTV1	P34078	463 aa		5.33	□□□□□ -1.56
SIR2	YDL042C	FMP46	P36141	133 aa	Known RBP	5.33	□□□□□ -1.56
SIR2	YDL042C	RRN10	P38204	145 aa		5.33	□□□□□ -1.56
SIR2	YDL042C	MEP2	P41948	499 aa		5.33	□□□□□ -1.56
SIR2	YDL042C	RRT5	P43607	289 aa		5.33	□□□□□ -1.56
SIR2	YDL042C	YDL186W	P48568	277 aa		5.33	□□□□□ -1.56
SIR2	YDL042C	GDH1	P07262	454 aa	Known RBP	5.32	□□□□□ -1.56
SIR2	YDL042C	FRE4	P53746	719 aa		5.32	□□□□□ -1.56
SIR2	YDL042C	CAF40	P53829	373 aa		5.32	□□□□□ -1.56
SIR2	YDL042C	REX4	Q08237	289 aa		5.32	□□□□□ -1.56
SIR2	YDL042C	UAF30	Q08747	228 aa		5.32	□□□□□ -1.56
SIR2	YDL042C	PAR32	Q12515	295 aa	Known RBP	5.32	□□□□□ -1.56
SIR2	YDL042C	LPD1	P09624	499 aa	Known RBP	5.31	□□□□□ -1.56
SIR2	YDL042C	LYS1	P38998	373 aa	RIP-Chip data	5.31	□□□□□ -1.56	RIP-Chip
SIR2	YDL042C	VHS2	P40463	436 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	PHO86	P46956	311 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	YJL055W	P47044	245 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	HMS2	P47175	358 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	TOM22	P49334	152 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	MUM3	Q08750	479 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	PPT2	Q12036	173 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	YPR022C	Q12139	1133 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	SMY1	P32364	656 aa	Known RBP	5.31	□□□□□ -1.56
SIR2	YDL042C	ASC1	P38011	319 aa	Known RBP	5.31	□□□□□ -1.56
SIR2	YDL042C	MRP51	Q02950	344 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	ERO1	Q03103	563 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	YPL199C	Q08954	240 aa		5.31	□□□□□ -1.56
SIR2	YDL042C	MDL1	P33310	695 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	ZTA1	P38230	334 aa	Known RBP	5.3	□□□□□ -1.56
SIR2	YDL042C	RRP4	P38792	359 aa	Known RBP	5.3	□□□□□ -1.56
SIR2	YDL042C	GDI1	P39958	451 aa	Known RBP	5.3	□□□□□ -1.56
SIR2	YDL042C	JEM1	P40358	645 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	SSN8	P47821	323 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	RCF1	Q03713	159 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	YLL056C	Q12177	298 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	BUG1	Q12191	341 aa		5.3	□□□□□ -1.56
SIR2	YDL042C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.3	□□□□□ -1.56
SIR2	YDL042C	ARO3	P14843	370 aa	Known RBP	5.29	□□□□□ -1.56
SIR2	YDL042C	CTR86	P25355	563 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	AGA1	P32323	725 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	SWH1	P35845	1188 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	SCS3	P53012	380 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	GIP3	Q03016	1276 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	TAF12	Q03761	539 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	SGT1	Q08446	395 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	TIM18	Q08749	192 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	RPN5	Q12250	445 aa	Known RBP	5.29	□□□□□ -1.56
SIR2	YDL042C	ORT1	Q12375	292 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	YBR298C-A	Q8TGK4	73 aa		5.29	□□□□□ -1.56
SIR2	YDL042C	HSP82	P02829	709 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	ADE4	P04046	510 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	SAM1	P10659	382 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	SAM2	P19358	384 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	RNA14	P25298	677 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	TIP1	P27654	210 aa	Predicted RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	YNR048W	P53740	393 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	WSC2	P53832	503 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	ARG4	P04076	463 aa	Predicted RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	CPR1	P14832	162 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	BLI1	P35727	113 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	FAD1	P38913	306 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	MST28	P39552	234 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	EFM4	P40516	257 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	PKH2	Q12236	1081 aa	Known RBP	5.28	□□□□□ -1.56
SIR2	YDL042C	YMR230W-A	Q3E7B5	62 aa		5.28	□□□□□ -1.56
SIR2	YDL042C	COX3	P00420	269 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	ILV5	P06168	395 aa	Known RBP	5.27	□□□□□ -1.57
SIR2	YDL042C	PMR1	P13586	950 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	LSB5	P25369	354 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	HEL1	P36113	551 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	YAL037W	P39728	267 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	GPI15	P53961	229 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	YLR456W	Q06199	204 aa		5.27	□□□□□ -1.57
SIR2	YDL042C	SKI7	Q08491	747 aa	Predicted RBP	5.27	□□□□□ -1.57
SIR2	YDL042C	TEF1	P02994	458 aa	Known RBP	5.26	□□□□□ -1.57
SIR2	YDL042C	ITR1	P30605	584 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	NAT2	P37293	288 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	PCA1	P38360	1216 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	MKT1	P40850	830 aa	Known RBP	5.26	□□□□□ -1.57
SIR2	YDL042C	IDP2	P41939	412 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	LAM5	P43560	674 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	RMD5	Q12508	421 aa		5.26	□□□□□ -1.57
SIR2	YDL042C	PRP16	P15938	1071 aa	Predicted RBP	5.25	□□□□□ -1.57
SIR2	YDL042C	RIM1	P32445	135 aa	Known RBP	5.25	□□□□□ -1.57
SIR2	YDL042C	NIP1	P32497	812 aa	Known RBP	5.25	□□□□□ -1.57
SIR2	YDL042C	MRP4	P32902	394 aa		5.25	□□□□□ -1.57
SIR2	YDL042C	MSO1	P53604	210 aa	Known RBP	5.25	□□□□□ -1.57
SIR2	YDL042C	RSN1	Q03516	953 aa		5.25	□□□□□ -1.57
SIR2	YDL042C	BET5	Q03630	159 aa		5.25	□□□□□ -1.57
SIR2	YDL042C	RPN9	Q04062	393 aa	Known RBP	5.25	□□□□□ -1.57
SIR2	YDL042C	CHS1	P08004	1131 aa		5.24	□□□□□ -1.57
SIR2	YDL042C	RPL1A	P0CX43	217 aa	Known RBP	5.24	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 124.7 ms