RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W ORT1Q12375 292 aa4.08□□□□□ -1.76
SPO20YMR017W RAD61Q99359 647 aa4.08□□□□□ -1.76
SPO20YMR017W ILV5P06168 395 aaKnown RBP4.07□□□□□ -1.76
SPO20YMR017W LSB5P25369 354 aa4.07□□□□□ -1.76
SPO20YMR017W ITR1P30605 584 aa4.07□□□□□ -1.76
SPO20YMR017W VMA8P32610 256 aaKnown RBP4.07□□□□□ -1.76
SPO20YMR017W RIB5P38145 238 aa4.07□□□□□ -1.76
SPO20YMR017W OCA2P53949 197 aa4.07□□□□□ -1.76
SPO20YMR017W HOT1Q03213 719 aa4.07□□□□□ -1.76
SPO20YMR017W TEF1P02994 458 aaKnown RBP4.06□□□□□ -1.76
SPO20YMR017W CPR2P23285 205 aa4.06□□□□□ -1.76
SPO20YMR017W CPR4P25334 318 aa4.06□□□□□ -1.76
SPO20YMR017W CTR86P25355 563 aa4.06□□□□□ -1.76
SPO20YMR017W SPS22P25380 463 aa4.06□□□□□ -1.76
SPO20YMR017W SMY1P32364 656 aaKnown RBP4.06□□□□□ -1.76
SPO20YMR017W RRN10P38204 145 aa4.06□□□□□ -1.76
SPO20YMR017W PHO86P46956 311 aa4.06□□□□□ -1.76
SPO20YMR017W GIP3Q03016 1276 aa4.06□□□□□ -1.76
SPO20YMR017W TAF12Q03761 539 aa4.06□□□□□ -1.76
SPO20YMR017W VPS54Q12071 889 aa4.06□□□□□ -1.76
SPO20YMR017W MED2Q12124 431 aa4.06□□□□□ -1.76
SPO20YMR017W SMC6Q12749 1114 aa4.06□□□□□ -1.76
SPO20YMR017W MDH1P17505 334 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SPO20YMR017W RRP4P38792 359 aaKnown RBP4.05□□□□□ -1.76
SPO20YMR017W FAA2P39518 744 aa4.05□□□□□ -1.76
SPO20YMR017W YPI1P43587 155 aa4.05□□□□□ -1.76
SPO20YMR017W PHB2P50085 310 aa4.05□□□□□ -1.76
SPO20YMR017W RPT4P53549 437 aaKnown RBP4.05□□□□□ -1.76
SPO20YMR017W GPI15P53961 229 aa4.05□□□□□ -1.76
SPO20YMR017W BET5Q03630 159 aa4.05□□□□□ -1.76
SPO20YMR017W RRN11Q04712 507 aa4.05□□□□□ -1.76
SPO20YMR017W PBA1Q05778 276 aa4.05□□□□□ -1.76
SPO20YMR017W SKI7Q08491 747 aaPredicted RBP4.05□□□□□ -1.76
SPO20YMR017W YLR108CQ12259 485 aa4.05□□□□□ -1.76
SPO20YMR017W RMD5Q12508 421 aa4.05□□□□□ -1.76
SPO20YMR017W SLY1P22213 666 aa4.04□□□□□ -1.76
SPO20YMR017W YBL059WP34224 193 aa4.04□□□□□ -1.76
SPO20YMR017W KKQ8P36004 724 aa4.04□□□□□ -1.76
SPO20YMR017W YBR139WP38109 508 aa4.04□□□□□ -1.76
SPO20YMR017W RFS1P38234 210 aaKnown RBP4.04□□□□□ -1.76
SPO20YMR017W YAL037WP39728 267 aa4.04□□□□□ -1.76
SPO20YMR017W WWM1P43582 211 aaKnown RBP4.04□□□□□ -1.76
SPO20YMR017W NCA3P46955 337 aa4.04□□□□□ -1.76
SPO20YMR017W YMR181CQ03231 154 aa4.04□□□□□ -1.76
SPO20YMR017W RSN1Q03516 953 aa4.04□□□□□ -1.76
SPO20YMR017W YOR387CQ08910 206 aa4.04□□□□□ -1.76
SPO20YMR017W ERV2Q12284 196 aa4.04□□□□□ -1.76
SPO20YMR017W HHF1P02309 103 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W SPT15P13393 240 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W SPO7P18410 259 aa4.03□□□□□ -1.76
SPO20YMR017W DEG1P31115 442 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W PXA2P34230 853 aa4.03□□□□□ -1.76
SPO20YMR017W NDT80P38830 627 aa4.03□□□□□ -1.76
SPO20YMR017W MTC6P38849 526 aa4.03□□□□□ -1.76
SPO20YMR017W SER3P40054 469 aa4.03□□□□□ -1.76
SPO20YMR017W SPG5P42933 373 aa4.03□□□□□ -1.76
SPO20YMR017W TOM22P49334 152 aa4.03□□□□□ -1.76
SPO20YMR017W TOF1P53840 1238 aa4.03□□□□□ -1.76
SPO20YMR017W HXT11P54862 567 aa4.03□□□□□ -1.76
SPO20YMR017W ELP3Q02908 557 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W PPM1Q04081 328 aa4.03□□□□□ -1.76
SPO20YMR017W TSR1Q07381 788 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W SNX3Q08826 162 aaKnown RBP4.03□□□□□ -1.76
SPO20YMR017W RSA1Q08932 381 aa4.03□□□□□ -1.76
SPO20YMR017W ERP4Q12450 207 aa4.03□□□□□ -1.76
SPO20YMR017W MTR10Q99189 972 aa4.03□□□□□ -1.76
SPO20YMR017W YBR137WP38276 179 aa4.02□□□□□ -1.77
SPO20YMR017W YML6P51998 286 aa4.02□□□□□ -1.77
SPO20YMR017W HEL2Q05580 639 aaKnown RBP4.02□□□□□ -1.77
SPO20YMR017W COX3P00420 269 aa4.01□□□□□ -1.77
SPO20YMR017W ADE4P04046 510 aaKnown RBP4.01□□□□□ -1.77
SPO20YMR017W SPO12P17123 173 aa4.01□□□□□ -1.77
SPO20YMR017W NAM9P27929 486 aa4.01□□□□□ -1.77
SPO20YMR017W PCF11P39081 626 aaPredicted RBP4.01□□□□□ -1.77
SPO20YMR017W VHS2P40463 436 aa4.01□□□□□ -1.77
SPO20YMR017W PRM5P40476 318 aa4.01□□□□□ -1.77
SPO20YMR017W RSC1P53236 928 aa4.01□□□□□ -1.77
SPO20YMR017W YGR111WP53265 400 aa4.01□□□□□ -1.77
SPO20YMR017W GIS2P53849 153 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SPO20YMR017W CIK1Q01649 594 aa4.01□□□□□ -1.77
SPO20YMR017W AEP3Q12089 606 aa4.01□□□□□ -1.77
SPO20YMR017W NIP1P32497 812 aaKnown RBP4□□□□□ -1.77
SPO20YMR017W SDH3P33421 198 aa4□□□□□ -1.77
SPO20YMR017W PAD1P33751 242 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
SPO20YMR017W HEL1P36113 551 aa4□□□□□ -1.77
SPO20YMR017W AZR1P50080 613 aa4□□□□□ -1.77
SPO20YMR017W YGL242CP53066 181 aa4□□□□□ -1.77
SPO20YMR017W OAZ1Q02803 292 aa4□□□□□ -1.77
SPO20YMR017W SRL2Q12020 392 aa4□□□□□ -1.77
SPO20YMR017W BUG1Q12191 341 aa4□□□□□ -1.77
SPO20YMR017W IMA3P0CW40 589 aa3.99□□□□□ -1.77
SPO20YMR017W IMA4P0CW41 589 aa3.99□□□□□ -1.77
SPO20YMR017W HOM3P10869 527 aa3.99□□□□□ -1.77
SPO20YMR017W ARO3P14843 370 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W ARO2P28777 376 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W MUD1P32605 298 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W ASC1P38011 319 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W ZTA1P38230 334 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W PTH1P38876 190 aaKnown RBP3.99□□□□□ -1.77
SPO20YMR017W SMA2Q04658 369 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms