RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C THI73Q07904 523 aa7.09□□□□□ -1.28
AFG2YLR397C RFU1Q08003 200 aa7.09□□□□□ -1.28
AFG2YLR397C UAF30Q08747 228 aa7.09□□□□□ -1.28
AFG2YLR397C YPR063CQ12160 140 aa7.09□□□□□ -1.28
AFG2YLR397C FBA1P14540 359 aaKnown RBP7.08□□□□□ -1.28
AFG2YLR397C RPS1BP23248 255 aaKnown RBP7.08□□□□□ -1.28
AFG2YLR397C TRK2P28584 889 aa7.08□□□□□ -1.28
AFG2YLR397C RPS1AP33442 255 aaKnown RBP7.08□□□□□ -1.28
AFG2YLR397C SSS1P35179 80 aa7.08□□□□□ -1.28
AFG2YLR397C CTP1P38152 299 aa7.08□□□□□ -1.28
AFG2YLR397C EXO5P38289 585 aa7.08□□□□□ -1.28
AFG2YLR397C ARN2P38724 620 aa7.08□□□□□ -1.28
AFG2YLR397C CRG1P38892 291 aaRIP-Chip data7.08□□□□□ -1.28not detected
AFG2YLR397C YCK3P39962 524 aa7.08□□□□□ -1.28
AFG2YLR397C ECM27P47144 725 aa7.08□□□□□ -1.28
AFG2YLR397C ARH1P48360 493 aa7.08□□□□□ -1.28
AFG2YLR397C CBK1P53894 756 aa7.08□□□□□ -1.28
AFG2YLR397C SEN54Q02825 467 aaPredicted RBP7.08□□□□□ -1.28
AFG2YLR397C UBP16Q02863 499 aa7.08□□□□□ -1.28
AFG2YLR397C ATG16Q03818 150 aa7.08□□□□□ -1.28
AFG2YLR397C CAC2Q04199 468 aa7.08□□□□□ -1.28
AFG2YLR397C MRL1Q06815 381 aa7.08□□□□□ -1.28
AFG2YLR397C ENT4Q07872 247 aa7.08□□□□□ -1.28
AFG2YLR397C YOL019WQ08157 551 aa7.08□□□□□ -1.28
AFG2YLR397C FAL1Q12099 399 aaKnown RBP7.08□□□□□ -1.28
AFG2YLR397C RBD2Q12270 262 aa7.08□□□□□ -1.28
AFG2YLR397C RIF1P29539 1916 aa7.08□□□□□ -1.28
AFG2YLR397C ACO1P19414 778 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
AFG2YLR397C MRPL44P19956 98 aa7.07□□□□□ -1.28
AFG2YLR397C PRP2P20095 876 aaPredicted RBP7.07□□□□□ -1.28
AFG2YLR397C PEX34P25584 144 aa7.07□□□□□ -1.28
AFG2YLR397C VAC17P25591 423 aa7.07□□□□□ -1.28
AFG2YLR397C ISC10P32645 267 aa7.07□□□□□ -1.28
AFG2YLR397C OAR1P35731 278 aa7.07□□□□□ -1.28
AFG2YLR397C YKL162CP36052 402 aa7.07□□□□□ -1.28
AFG2YLR397C ECM8P38246 354 aa7.07□□□□□ -1.28
AFG2YLR397C PHO89P38361 574 aa7.07□□□□□ -1.28
AFG2YLR397C YHR131CP38835 850 aa7.07□□□□□ -1.28
AFG2YLR397C ERV46P39727 415 aa7.07□□□□□ -1.28
AFG2YLR397C LSM4P40070 187 aaKnown RBP7.07□□□□□ -1.28
AFG2YLR397C CIN5P40917 295 aa7.07□□□□□ -1.28
AFG2YLR397C SIP4P46954 829 aa7.07□□□□□ -1.28
AFG2YLR397C YJR030CP47101 745 aa7.07□□□□□ -1.28
AFG2YLR397C HLJ1P48353 224 aa7.07□□□□□ -1.28
AFG2YLR397C YNL033WP53964 284 aa7.07□□□□□ -1.28
AFG2YLR397C YNL019CP53975 284 aa7.07□□□□□ -1.28
AFG2YLR397C PEX13P80667 386 aa7.07□□□□□ -1.28
AFG2YLR397C TIM44Q01852 431 aa7.07□□□□□ -1.28
AFG2YLR397C YPL113CQ02961 396 aa7.07□□□□□ -1.28
AFG2YLR397C SNU56Q03782 492 aaKnown RBP7.07□□□□□ -1.28
AFG2YLR397C AI1P03875 834 aa7.07□□□□□ -1.28
AFG2YLR397C PET54P10834 293 aa7.07□□□□□ -1.28
AFG2YLR397C SEC62P21825 274 aa7.07□□□□□ -1.28
AFG2YLR397C DAL2P25335 343 aa7.07□□□□□ -1.28
AFG2YLR397C ADE1P27616 306 aa7.07□□□□□ -1.28
AFG2YLR397C GAC1P28006 793 aa7.07□□□□□ -1.28
AFG2YLR397C LIP5P32875 414 aa7.07□□□□□ -1.28
AFG2YLR397C SHG1P38337 142 aa7.07□□□□□ -1.28
AFG2YLR397C FET3P38993 636 aa7.07□□□□□ -1.28
AFG2YLR397C ACO2P39533 789 aa7.07□□□□□ -1.28
AFG2YLR397C LAS21P40367 830 aa7.07□□□□□ -1.28
AFG2YLR397C ARC1P46672 376 aaKnown RBP7.07□□□□□ -1.28
AFG2YLR397C YGR012WP53206 393 aa7.07□□□□□ -1.28
AFG2YLR397C ERO1Q03103 563 aa7.07□□□□□ -1.28
AFG2YLR397C SDO1Q07953 250 aaKnown RBP7.07□□□□□ -1.28
AFG2YLR397C MSC6Q08818 692 aaKnown RBP7.07□□□□□ -1.28
AFG2YLR397C YOR022CQ12204 715 aa7.07□□□□□ -1.28
AFG2YLR397C FKS3Q04952 1785 aa7.07□□□□□ -1.28
AFG2YLR397C FLP1P03870 423 aa7.06□□□□□ -1.28
AFG2YLR397C REP2P03872 296 aa7.06□□□□□ -1.28
AFG2YLR397C SLY1P22213 666 aa7.06□□□□□ -1.28
AFG2YLR397C AAT2P23542 418 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C RAD55P38953 406 aa7.06□□□□□ -1.28
AFG2YLR397C FHL1P39521 936 aa7.06□□□□□ -1.28
AFG2YLR397C PTI1P39927 425 aaPredicted RBP7.06□□□□□ -1.28
AFG2YLR397C RPN3P40016 523 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C YEN1P40028 759 aa7.06□□□□□ -1.28
AFG2YLR397C CAK1P43568 368 aaPredicted RBP7.06□□□□□ -1.28
AFG2YLR397C PTR3P43606 678 aa7.06□□□□□ -1.28
AFG2YLR397C DLD2P46681 530 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C YJR111CP47148 283 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C UFD1P53044 361 aa7.06□□□□□ -1.28
AFG2YLR397C POP6P53218 158 aa7.06□□□□□ -1.28
AFG2YLR397C EFR3Q03653 782 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C TVP15Q03860 143 aa7.06□□□□□ -1.28
AFG2YLR397C ESC8Q08119 714 aa7.06□□□□□ -1.28
AFG2YLR397C DDC1Q08949 612 aa7.06□□□□□ -1.28
AFG2YLR397C DIN7Q12086 430 aa7.06□□□□□ -1.28
AFG2YLR397C YRR1Q12172 810 aa7.06□□□□□ -1.28
AFG2YLR397C VAM3Q12241 283 aa7.06□□□□□ -1.28
AFG2YLR397C TRM10Q12400 293 aa7.06□□□□□ -1.28
AFG2YLR397C SEC53P07283 254 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C FUM1P08417 488 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C YER152CP10356 443 aa7.06□□□□□ -1.28
AFG2YLR397C TCP1P12612 559 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C MRPL9P31334 269 aa7.06□□□□□ -1.28
AFG2YLR397C AHP1P38013 176 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C RIM2P38127 377 aa7.06□□□□□ -1.28
AFG2YLR397C GEP4P38812 185 aa7.06□□□□□ -1.28
AFG2YLR397C VAB2P40003 282 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms