RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RPN11P43588 306 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C IMD3P50095 523 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C TNA1P53322 534 aa2.25□□□□□ -2.05
CSF1YLR087C YCL001W-AP87012 153 aa2.25□□□□□ -2.05
CSF1YLR087C FRE3Q08905 711 aa2.25□□□□□ -2.05
CSF1YLR087C FEX2Q08991 375 aa2.25□□□□□ -2.05
CSF1YLR087C SWT1Q12104 458 aa2.25□□□□□ -2.05
CSF1YLR087C MSS18P08593 268 aa2.25□□□□□ -2.05
CSF1YLR087C ATP10P18496 279 aa2.25□□□□□ -2.05
CSF1YLR087C PHO91P27514 894 aa2.25□□□□□ -2.05
CSF1YLR087C YKU70P32807 602 aa2.25□□□□□ -2.05
CSF1YLR087C ECM34P38728 170 aa2.25□□□□□ -2.05
CSF1YLR087C PNT1P38969 423 aa2.25□□□□□ -2.05
CSF1YLR087C IDS2P46958 469 aa2.25□□□□□ -2.05
CSF1YLR087C AVT4P50944 713 aa2.25□□□□□ -2.05
CSF1YLR087C CBK1P53894 756 aa2.25□□□□□ -2.05
CSF1YLR087C RSM10Q03201 203 aa2.25□□□□□ -2.05
CSF1YLR087C USA1Q03714 838 aa2.25□□□□□ -2.05
CSF1YLR087C YPR147CQ06522 304 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C YLR036CQ07986 203 aa2.25□□□□□ -2.05
CSF1YLR087C HRD1Q08109 551 aa2.25□□□□□ -2.05
CSF1YLR087C RGS2Q99188 309 aa2.25□□□□□ -2.05
CSF1YLR087C HMG2P12684 1045 aa2.25□□□□□ -2.05
CSF1YLR087C BGL2P15703 313 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C YPK3P38070 525 aa2.25□□□□□ -2.05
CSF1YLR087C YEL057CP39983 233 aa2.25□□□□□ -2.05
CSF1YLR087C GLR1P41921 483 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C ASG7P46993 209 aa2.25□□□□□ -2.05
CSF1YLR087C MTR3P48240 250 aaPredicted RBP2.25□□□□□ -2.05
CSF1YLR087C CUL3P53202 744 aa2.25□□□□□ -2.05
CSF1YLR087C GPI1P53306 609 aa2.25□□□□□ -2.05
CSF1YLR087C YML079WQ03629 201 aa2.25□□□□□ -2.05
CSF1YLR087C SWF1Q04629 336 aa2.25□□□□□ -2.05
CSF1YLR087C LCB5Q06147 687 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C RIF2Q06208 395 aa2.25□□□□□ -2.05
CSF1YLR087C DCN1Q12395 269 aa2.25□□□□□ -2.05
CSF1YLR087C SOD2P00447 233 aa2.25□□□□□ -2.05
CSF1YLR087C THO1P40040 218 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C YIR016WP40572 265 aa2.25□□□□□ -2.05
CSF1YLR087C MET28P40573 187 aa2.25□□□□□ -2.05
CSF1YLR087C IKS1P47042 667 aa2.25□□□□□ -2.05
CSF1YLR087C ROG1P53118 685 aa2.25□□□□□ -2.05
CSF1YLR087C AGC1Q12482 902 aa2.25□□□□□ -2.05
CSF1YLR087C THS1P04801 734 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C KIN28P06242 306 aa2.25□□□□□ -2.05
CSF1YLR087C ZTA1P38230 334 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C RFC5P38251 354 aa2.25□□□□□ -2.05
CSF1YLR087C TRS20P38334 175 aa2.25□□□□□ -2.05
CSF1YLR087C FYV4P38783 130 aaPredicted RBP2.25□□□□□ -2.05
CSF1YLR087C CIN2P46670 268 aa2.25□□□□□ -2.05
CSF1YLR087C CTK3P46963 296 aaPredicted RBP2.25□□□□□ -2.05
CSF1YLR087C ACT1P60010 375 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C MSC1Q03104 513 aa2.25□□□□□ -2.05
CSF1YLR087C TIR4Q12218 487 aaPredicted RBP2.25□□□□□ -2.05
CSF1YLR087C UBR2Q07963 1872 aa2.25□□□□□ -2.05
CSF1YLR087C TY1B-JR2P47100 1755 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C TY1B-ER2Q03619 1755 aa2.25□□□□□ -2.05
CSF1YLR087C TY1B-MR1Q04214 1755 aa2.25□□□□□ -2.05
CSF1YLR087C TY1B-MR2Q04670 1755 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C TY1B-LR1Q12088 1755 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C TY1B-NL1Q12112 1755 aa2.25□□□□□ -2.05
CSF1YLR087C TY1B-GR1Q12141 1755 aa2.25□□□□□ -2.05
CSF1YLR087C TY1B-BLQ12490 1755 aa2.25□□□□□ -2.05
CSF1YLR087C LEU2P04173 364 aaPredicted RBP2.25□□□□□ -2.05
CSF1YLR087C YLL053CP0CD98 152 aa2.25□□□□□ -2.05
CSF1YLR087C NAM2P11325 894 aa2.25□□□□□ -2.05
CSF1YLR087C SGV1P23293 657 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C MIC19P43594 170 aa2.25□□□□□ -2.05
CSF1YLR087C NUP57P48837 541 aa2.25□□□□□ -2.05
CSF1YLR087C APT1P49435 187 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C HRQ1Q05549 1077 aa2.25□□□□□ -2.05
CSF1YLR087C CRT10Q08226 957 aa2.25□□□□□ -2.05
CSF1YLR087C LPX1Q12405 387 aaKnown RBP2.25□□□□□ -2.05
CSF1YLR087C HXT2P23585 541 aa2.24□□□□□ -2.05
CSF1YLR087C MSK1P32048 576 aa2.24□□□□□ -2.05
CSF1YLR087C GLN1P32288 370 aaKnown RBP2.24□□□□□ -2.05
CSF1YLR087C RIB7P33312 244 aa2.24□□□□□ -2.05
CSF1YLR087C TRM2P33753 639 aa2.24□□□□□ -2.05
CSF1YLR087C TOD6P34219 525 aa2.24□□□□□ -2.05
CSF1YLR087C NDT80P38830 627 aa2.24□□□□□ -2.05
CSF1YLR087C KTR7P40504 517 aa2.24□□□□□ -2.05
CSF1YLR087C AIR1P40507 360 aaKnown RBP2.24□□□□□ -2.05
CSF1YLR087C MRPS18P42847 217 aa2.24□□□□□ -2.05
CSF1YLR087C NIT3P49954 291 aa2.24□□□□□ -2.05
CSF1YLR087C YPR003CP53394 754 aa2.24□□□□□ -2.05
CSF1YLR087C DSE4P53753 1117 aa2.24□□□□□ -2.05
CSF1YLR087C EAR1Q03212 550 aa2.24□□□□□ -2.05
CSF1YLR087C SSL1Q04673 461 aaPredicted RBP2.24□□□□□ -2.05
CSF1YLR087C REP2P03872 296 aa2.24□□□□□ -2.05
CSF1YLR087C HTS1P07263 546 aaKnown RBP2.24□□□□□ -2.05
CSF1YLR087C RDS2P19541 446 aaKnown RBP2.24□□□□□ -2.05
CSF1YLR087C SAG1P20840 650 aa2.24□□□□□ -2.05
CSF1YLR087C CBT1P36038 271 aaPredicted RBP2.24□□□□□ -2.05
CSF1YLR087C AKR1P39010 764 aa2.24□□□□□ -2.05
CSF1YLR087C RBG1P39729 369 aa2.24□□□□□ -2.05
CSF1YLR087C HEM14P40012 539 aa2.24□□□□□ -2.05
CSF1YLR087C YDR209CQ03480 137 aa2.24□□□□□ -2.05
CSF1YLR087C IPK1Q06667 281 aa2.24□□□□□ -2.05
CSF1YLR087C TPO4Q12256 659 aa2.24□□□□□ -2.05
CSF1YLR087C MCM16Q12262 181 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms