RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ROG1P53118 685 aa2.04□□□□□ -2.08
SNC1YAL030W YNR068CP53754 272 aa2.04□□□□□ -2.08
SNC1YAL030W TDA7P53882 636 aaPredicted RBP2.04□□□□□ -2.08
SNC1YAL030W IRC15Q02733 499 aa2.04□□□□□ -2.08
SNC1YAL030W RPM2Q02773 1202 aa2.04□□□□□ -2.08
SNC1YAL030W GIP3Q03016 1276 aa2.04□□□□□ -2.08
SNC1YAL030W RLI1Q03195 608 aaKnown RBP2.04□□□□□ -2.08
SNC1YAL030W YDR387CQ04162 555 aa2.04□□□□□ -2.08
SNC1YAL030W YMR087WQ04299 284 aa2.04□□□□□ -2.08
SNC1YAL030W RBA50Q04418 439 aa2.04□□□□□ -2.08
SNC1YAL030W IPK1Q06667 281 aa2.04□□□□□ -2.08
SNC1YAL030W SYO1Q07395 620 aa2.04□□□□□ -2.08
SNC1YAL030W PML1Q07930 204 aaPredicted RBP2.04□□□□□ -2.08
SNC1YAL030W AAD15Q08361 143 aa2.04□□□□□ -2.08
SNC1YAL030W DSE3Q08729 430 aa2.04□□□□□ -2.08
SNC1YAL030W RTC5Q12108 567 aaKnown RBP2.04□□□□□ -2.08
SNC1YAL030W RMD5Q12508 421 aa2.04□□□□□ -2.08
SNC1YAL030W ARG4P04076 463 aaPredicted RBP2.03□□□□□ -2.08
SNC1YAL030W NFT1P0CE68 1218 aa2.03□□□□□ -2.08
SNC1YAL030W YAR066WP0CX18 203 aa2.03□□□□□ -2.08
SNC1YAL030W YHR214WP0CX19 203 aa2.03□□□□□ -2.08
SNC1YAL030W RPL42AP0CX27 106 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W RPL42BP0CX28 106 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W YFL068WP0CX99 160 aa2.03□□□□□ -2.08
SNC1YAL030W YLL066W-AP0CY00 160 aa2.03□□□□□ -2.08
SNC1YAL030W YLL067W-AP0CY01 160 aa2.03□□□□□ -2.08
SNC1YAL030W LSB5P25369 354 aa2.03□□□□□ -2.08
SNC1YAL030W SUR1P33300 382 aa2.03□□□□□ -2.08
SNC1YAL030W SIP2P34164 415 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W SPT10P35208 640 aa2.03□□□□□ -2.08
SNC1YAL030W ASK1P35734 292 aa2.03□□□□□ -2.08
SNC1YAL030W YCR041WP37265 110 aa2.03□□□□□ -2.08
SNC1YAL030W RIM2P38127 377 aa2.03□□□□□ -2.08
SNC1YAL030W QDR3P38227 689 aa2.03□□□□□ -2.08
SNC1YAL030W RRP4P38792 359 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W LYS1P38998 373 aaRIP-Chip data2.03□□□□□ -2.08 RIP-Chip
SNC1YAL030W VPS52P39904 641 aa2.03□□□□□ -2.08
SNC1YAL030W XBP1P40489 647 aa2.03□□□□□ -2.08
SNC1YAL030W YIL089WP40500 205 aa2.03□□□□□ -2.08
SNC1YAL030W DIM1P41819 318 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W CUE3P53137 624 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W PIB2P53191 635 aa2.03□□□□□ -2.08
SNC1YAL030W PCP1P53259 346 aa2.03□□□□□ -2.08
SNC1YAL030W YNR048WP53740 393 aa2.03□□□□□ -2.08
SNC1YAL030W YNL143CP53908 130 aa2.03□□□□□ -2.08
SNC1YAL030W AQR1P53943 586 aa2.03□□□□□ -2.08
SNC1YAL030W STP1Q00947 519 aa2.03□□□□□ -2.08
SNC1YAL030W UTP6Q02354 440 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W MRP51Q02950 344 aa2.03□□□□□ -2.08
SNC1YAL030W ODC1Q03028 310 aa2.03□□□□□ -2.08
SNC1YAL030W RSN1Q03516 953 aa2.03□□□□□ -2.08
SNC1YAL030W NUP53Q03790 475 aa2.03□□□□□ -2.08
SNC1YAL030W HCR1Q05775 265 aaKnown RBP2.03□□□□□ -2.08
SNC1YAL030W THI7Q05998 598 aa2.03□□□□□ -2.08
SNC1YAL030W SPH1Q06160 661 aa2.03□□□□□ -2.08
SNC1YAL030W REX4Q08237 289 aa2.03□□□□□ -2.08
SNC1YAL030W NRT1Q08485 598 aa2.03□□□□□ -2.08
SNC1YAL030W SKI7Q08491 747 aaPredicted RBP2.03□□□□□ -2.08
SNC1YAL030W YLL056CQ12177 298 aa2.03□□□□□ -2.08
SNC1YAL030W CEX1Q12453 761 aa2.03□□□□□ -2.08
SNC1YAL030W SFG1Q12507 346 aa2.03□□□□□ -2.08
SNC1YAL030W INO80P53115 1489 aa2.02□□□□□ -2.09
SNC1YAL030W CDC21P06785 304 aa2.02□□□□□ -2.09
SNC1YAL030W CHS1P08004 1131 aa2.02□□□□□ -2.09
SNC1YAL030W IMA3P0CW40 589 aa2.02□□□□□ -2.09
SNC1YAL030W IMA4P0CW41 589 aa2.02□□□□□ -2.09
SNC1YAL030W GLN3P18494 730 aa2.02□□□□□ -2.09
SNC1YAL030W PTP1P25044 335 aa2.02□□□□□ -2.09
SNC1YAL030W PSO2P30620 661 aa2.02□□□□□ -2.09
SNC1YAL030W CYS4P32582 507 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W ATO2P32907 282 aa2.02□□□□□ -2.09
SNC1YAL030W FRE2P36033 711 aa2.02□□□□□ -2.09
SNC1YAL030W EBP2P36049 427 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W RSM22P36056 628 aa2.02□□□□□ -2.09
SNC1YAL030W PCH2P38126 564 aa2.02□□□□□ -2.09
SNC1YAL030W YBL028CP38202 106 aa2.02□□□□□ -2.09
SNC1YAL030W KAP104P38217 918 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W MSG5P38590 489 aa2.02□□□□□ -2.09
SNC1YAL030W RTT107P38850 1070 aa2.02□□□□□ -2.09
SNC1YAL030W MNL1P38888 796 aa2.02□□□□□ -2.09
SNC1YAL030W YDR089WP38966 869 aa2.02□□□□□ -2.09
SNC1YAL030W ISC1P40015 477 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W MEP1P40260 492 aa2.02□□□□□ -2.09
SNC1YAL030W YIR016WP40572 265 aa2.02□□□□□ -2.09
SNC1YAL030W AZF1P41696 914 aa2.02□□□□□ -2.09
SNC1YAL030W LAM5P43560 674 aa2.02□□□□□ -2.09
SNC1YAL030W GWT1P47026 490 aa2.02□□□□□ -2.09
SNC1YAL030W HMS2P47175 358 aa2.02□□□□□ -2.09
SNC1YAL030W MPS2P53159 387 aa2.02□□□□□ -2.09
SNC1YAL030W RTT102P53330 157 aa2.02□□□□□ -2.09
SNC1YAL030W PRM1P53835 661 aa2.02□□□□□ -2.09
SNC1YAL030W YIF1P53845 314 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W ARP5P53946 755 aa2.02□□□□□ -2.09
SNC1YAL030W ARK1P53974 638 aa2.02□□□□□ -2.09
SNC1YAL030W MMT1Q03218 510 aa2.02□□□□□ -2.09
SNC1YAL030W YDR415CQ04033 374 aaPredicted RBP2.02□□□□□ -2.09
SNC1YAL030W URC2Q04411 772 aa2.02□□□□□ -2.09
SNC1YAL030W RRP9Q06506 573 aaKnown RBP2.02□□□□□ -2.09
SNC1YAL030W IMA2Q08295 589 aa2.02□□□□□ -2.09
SNC1YAL030W SRL2Q12020 392 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms