RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W SAM1P10659 382 aaKnown RBP3.07□□□□□ -1.92
SRP1YNL189W ATR1P13090 542 aa3.07□□□□□ -1.92
SRP1YNL189W CLC1P17891 233 aa3.07□□□□□ -1.92
SRP1YNL189W SAM2P19358 384 aaKnown RBP3.07□□□□□ -1.92
SRP1YNL189W URA4P20051 364 aa3.07□□□□□ -1.92
SRP1YNL189W APE2P32454 952 aaKnown RBP3.07□□□□□ -1.92
SRP1YNL189W ECM25P32525 599 aa3.07□□□□□ -1.92
SRP1YNL189W TFB1P32776 642 aa3.07□□□□□ -1.92
SRP1YNL189W NTC20P38302 140 aaPredicted RBP3.07□□□□□ -1.92
SRP1YNL189W RRT2P38332 387 aa3.07□□□□□ -1.92
SRP1YNL189W PCA1P38360 1216 aa3.07□□□□□ -1.92
SRP1YNL189W SER3P40054 469 aa3.07□□□□□ -1.92
SRP1YNL189W POP6P53218 158 aa3.07□□□□□ -1.92
SRP1YNL189W RSC1P53236 928 aa3.07□□□□□ -1.92
SRP1YNL189W DSL1P53847 754 aa3.07□□□□□ -1.92
SRP1YNL189W MMR1Q06324 491 aa3.07□□□□□ -1.92
SRP1YNL189W DIS3Q08162 1001 aaKnown RBP3.07□□□□□ -1.92
SRP1YNL189W YPR022CQ12139 1133 aa3.07□□□□□ -1.92
SRP1YNL189W ISA2Q12425 185 aa3.07□□□□□ -1.92
SRP1YNL189W TY1B-AO13527 1196 aaKnown RBP3.06□□□□□ -1.92
SRP1YNL189W ILV5P06168 395 aaKnown RBP3.06□□□□□ -1.92
SRP1YNL189W KRE2P27809 442 aa3.06□□□□□ -1.92
SRP1YNL189W GYP6P32806 458 aa3.06□□□□□ -1.92
SRP1YNL189W SOR1P35497 357 aaKnown RBP3.06□□□□□ -1.92
SRP1YNL189W YHR218WP38899 603 aa3.06□□□□□ -1.92
SRP1YNL189W SKO1Q02100 647 aa3.06□□□□□ -1.92
SRP1YNL189W PNG1Q02890 363 aa3.06□□□□□ -1.92
SRP1YNL189W ODC1Q03028 310 aa3.06□□□□□ -1.92
SRP1YNL189W ACL4Q03771 387 aa3.06□□□□□ -1.92
SRP1YNL189W RTT103Q05543 409 aa3.06□□□□□ -1.92
SRP1YNL189W SOR2Q07786 357 aa3.06□□□□□ -1.92
SRP1YNL189W PPT2Q12036 173 aa3.06□□□□□ -1.92
SRP1YNL189W SMC6Q12749 1114 aa3.06□□□□□ -1.92
SRP1YNL189W YCL021W-AQ96VH3 125 aa3.06□□□□□ -1.92
SRP1YNL189W HIP1P06775 603 aa3.05□□□□□ -1.92
SRP1YNL189W YAR066WP0CX18 203 aa3.05□□□□□ -1.92
SRP1YNL189W YHR214WP0CX19 203 aa3.05□□□□□ -1.92
SRP1YNL189W SRV2P17555 526 aaKnown RBP3.05□□□□□ -1.92
SRP1YNL189W REC114P32841 428 aa3.05□□□□□ -1.92
SRP1YNL189W SLM4P38247 162 aa3.05□□□□□ -1.92
SRP1YNL189W TIF5P38431 405 aaKnown RBP3.05□□□□□ -1.92
SRP1YNL189W ECM27P47144 725 aa3.05□□□□□ -1.92
SRP1YNL189W OCA2P53949 197 aa3.05□□□□□ -1.92
SRP1YNL189W RKM1Q08961 583 aaPredicted RBP3.05□□□□□ -1.92
SRP1YNL189W COX3P00420 269 aa3.04□□□□□ -1.92
SRP1YNL189W CPR1P14832 162 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W ARO3P14843 370 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W PIM1P36775 1133 aa3.04□□□□□ -1.92
SRP1YNL189W RRP4P38792 359 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W CAK1P43568 368 aaPredicted RBP3.04□□□□□ -1.92
SRP1YNL189W YJR011CP47086 261 aaPredicted RBP3.04□□□□□ -1.92
SRP1YNL189W PHB2P50085 310 aa3.04□□□□□ -1.92
SRP1YNL189W OGG1P53397 376 aaPredicted RBP3.04□□□□□ -1.92
SRP1YNL189W GOR1P53839 350 aa3.04□□□□□ -1.92
SRP1YNL189W THP3Q12049 470 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W ORT1Q12375 292 aa3.04□□□□□ -1.92
SRP1YNL189W CLN1P20437 546 aa3.04□□□□□ -1.92
SRP1YNL189W APE3P37302 537 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W SRP72P38688 640 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W OST1P41543 476 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W IDP2P41939 412 aa3.04□□□□□ -1.92
SRP1YNL189W MSO1P53604 210 aaKnown RBP3.04□□□□□ -1.92
SRP1YNL189W FRE4P53746 719 aa3.04□□□□□ -1.92
SRP1YNL189W YMR130WQ04223 302 aa3.04□□□□□ -1.92
SRP1YNL189W VPS54Q12071 889 aa3.04□□□□□ -1.92
SRP1YNL189W CPR2P23285 205 aa3.03□□□□□ -1.92
SRP1YNL189W TIP1P27654 210 aaPredicted RBP3.03□□□□□ -1.92
SRP1YNL189W BRF1P29056 596 aa3.03□□□□□ -1.92
SRP1YNL189W RGT1P32862 1170 aa3.03□□□□□ -1.92
SRP1YNL189W MRP4P32902 394 aa3.03□□□□□ -1.92
SRP1YNL189W YHR054CP38780 354 aa3.03□□□□□ -1.92
SRP1YNL189W MKT1P40850 830 aaKnown RBP3.03□□□□□ -1.92
SRP1YNL189W DCS1Q06151 350 aa3.03□□□□□ -1.92
SRP1YNL189W HNT3Q08702 217 aa3.03□□□□□ -1.92
SRP1YNL189W YPL199CQ08954 240 aa3.03□□□□□ -1.92
SRP1YNL189W YER078W-AQ3E7A2 54 aa3.03□□□□□ -1.92
SRP1YNL189W CTR86P25355 563 aa3.02□□□□□ -1.93
SRP1YNL189W YBR137WP38276 179 aa3.02□□□□□ -1.93
SRP1YNL189W LYS1P38998 373 aaRIP-Chip data3.02□□□□□ -1.93not detected
SRP1YNL189W CCT4P39078 528 aaKnown RBP3.02□□□□□ -1.93
SRP1YNL189W YIL067CP40514 678 aa3.02□□□□□ -1.93
SRP1YNL189W PHO86P46956 311 aa3.02□□□□□ -1.93
SRP1YNL189W HMS2P47175 358 aa3.02□□□□□ -1.93
SRP1YNL189W CAF40P53829 373 aa3.02□□□□□ -1.93
SRP1YNL189W IMP4P53941 290 aaKnown RBP3.02□□□□□ -1.93
SRP1YNL189W HEL2Q05580 639 aaKnown RBP3.02□□□□□ -1.93
SRP1YNL189W SNT309Q06091 175 aaPredicted RBP3.02□□□□□ -1.93
SRP1YNL189W GPM3Q12326 303 aa3.02□□□□□ -1.93
SRP1YNL189W HIS4P00815 799 aaKnown RBP3.01□□□□□ -1.93
SRP1YNL189W SCEIP03882 235 aa3.01□□□□□ -1.93
SRP1YNL189W LPD1P09624 499 aaKnown RBP3.01□□□□□ -1.93
SRP1YNL189W MDH1P17505 334 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SRP1YNL189W HEL1P36113 551 aa3.01□□□□□ -1.93
SRP1YNL189W NAT2P37293 288 aa3.01□□□□□ -1.93
SRP1YNL189W MMS4P38257 691 aa3.01□□□□□ -1.93
SRP1YNL189W MST28P39552 234 aa3.01□□□□□ -1.93
SRP1YNL189W YML6P51998 286 aa3.01□□□□□ -1.93
SRP1YNL189W RPT4P53549 437 aaKnown RBP3.01□□□□□ -1.93
SRP1YNL189W BOR1P53838 576 aa3.01□□□□□ -1.93
SRP1YNL189W HXT11P54862 567 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms