RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W DRS1P32892 752 aaKnown RBP11.23□□□□□ -0.61
SRP1YNL189W MTC1P47018 478 aaKnown RBP11.12□□□□□ -0.63
SRP1YNL189W BFR2Q06631 534 aaKnown RBP9.72□□□□□ -0.85
SRP1YNL189W FAP1P53971 965 aa9.6□□□□□ -0.87
SRP1YNL189W DIP2Q12220 943 aaPredicted RBP9.55□□□□□ -0.88
SRP1YNL189W AVT3P36062 692 aa9.44□□□□□ -0.9
SRP1YNL189W TFA1P36100 482 aa9.16□□□□□ -0.94
SRP1YNL189W PRI1P10363 409 aa9.13□□□□□ -0.95
SRP1YNL189W ISW2Q08773 1120 aa9.09□□□□□ -0.95
SRP1YNL189W AAD16Q02895 342 aa9.05□□□□□ -0.96
SRP1YNL189W PRY3P47033 881 aa9□□□□□ -0.97
SRP1YNL189W RSE1Q04693 1361 aaKnown RBP8.96□□□□□ -0.97
SRP1YNL189W RPG1P38249 964 aaKnown RBP8.96□□□□□ -0.98
SRP1YNL189W RPL17AP05740 184 aaKnown RBP8.68□□□□□ -1.02
SRP1YNL189W RPL17BP46990 184 aaKnown RBP8.68□□□□□ -1.02
SRP1YNL189W TSR3Q12094 313 aaKnown RBP8.63□□□□□ -1.03
SRP1YNL189W REB1P21538 810 aa8.51□□□□□ -1.05
SRP1YNL189W HAA1Q12753 694 aaKnown RBP8.5□□□□□ -1.05
SRP1YNL189W YCK3P39962 524 aa8.47□□□□□ -1.05
SRP1YNL189W SPT21P35209 758 aa8.36□□□□□ -1.07
SRP1YNL189W MRPL32P25348 183 aa8.32□□□□□ -1.08
SRP1YNL189W RIM101P33400 625 aa8.24□□□□□ -1.09
SRP1YNL189W YKR023WP36119 530 aaKnown RBP8.11□□□□□ -1.11
SRP1YNL189W OXP1P28273 1286 aa8.04□□□□□ -1.12
SRP1YNL189W PTP3P40048 928 aa8.02□□□□□ -1.13
SRP1YNL189W HOP09932 586 aa7.96□□□□□ -1.14
SRP1YNL189W CDC27P38042 758 aa7.94□□□□□ -1.14
SRP1YNL189W DCD1P06773 312 aa7.93□□□□□ -1.14
SRP1YNL189W YGL015CP33199 130 aa7.92□□□□□ -1.14
SRP1YNL189W YAH1Q12184 172 aaKnown RBP7.92□□□□□ -1.14
SRP1YNL189W TFC8Q12308 588 aa7.91□□□□□ -1.14
SRP1YNL189W SSP1P38871 571 aa7.87□□□□□ -1.15
SRP1YNL189W YIL055CP40523 627 aaKnown RBP7.84□□□□□ -1.15
SRP1YNL189W YLR271WQ06152 274 aa7.8□□□□□ -1.16
SRP1YNL189W RSM7P47150 247 aa7.74□□□□□ -1.17
SRP1YNL189W BCH2P36122 765 aa7.7□□□□□ -1.18
SRP1YNL189W UBP10P53874 792 aaPredicted RBP7.69□□□□□ -1.18
SRP1YNL189W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
SRP1YNL189W MAP2P38174 421 aaKnown RBP7.64□□□□□ -1.19
SRP1YNL189W RQC2Q12532 1038 aaKnown RBP7.63□□□□□ -1.19
SRP1YNL189W AI2P03876 854 aa7.62□□□□□ -1.19
SRP1YNL189W DMA1P38823 416 aa7.6□□□□□ -1.19
SRP1YNL189W CST9Q06032 482 aa7.59□□□□□ -1.19
SRP1YNL189W MGA2P40578 1113 aa7.57□□□□□ -1.2
SRP1YNL189W SCY1P53009 804 aa7.56□□□□□ -1.2
SRP1YNL189W PSD2P53037 1138 aaKnown RBP7.56□□□□□ -1.2
SRP1YNL189W EPS1P40557 701 aa7.56□□□□□ -1.2
SRP1YNL189W BDF1P35817 686 aa7.5□□□□□ -1.21
SRP1YNL189W BBC1P47068 1157 aa7.5□□□□□ -1.21
SRP1YNL189W SLX5P32828 619 aaKnown RBP7.45□□□□□ -1.22
SRP1YNL189W MRM1P25270 412 aa7.4□□□□□ -1.22
SRP1YNL189W TIF4632P39936 914 aaKnown RBP7.39□□□□□ -1.23
SRP1YNL189W TGL3P40308 642 aa7.35□□□□□ -1.23
SRP1YNL189W RCR1P38212 213 aa7.34□□□□□ -1.23
SRP1YNL189W RAM2P29703 316 aa7.3□□□□□ -1.24
SRP1YNL189W RTG3P38165 486 aa7.25□□□□□ -1.25
SRP1YNL189W VPS29P38759 282 aa7.23□□□□□ -1.25
SRP1YNL189W STS1P38637 319 aa7.13□□□□□ -1.27
SRP1YNL189W YFR006WP43590 535 aa7.13□□□□□ -1.27
SRP1YNL189W SAS10Q12136 610 aaPredicted RBP7.13□□□□□ -1.27
SRP1YNL189W SET1P38827 1080 aaKnown RBP7.12□□□□□ -1.27
SRP1YNL189W MAK11P20484 414 aaKnown RBP7.11□□□□□ -1.27
SRP1YNL189W BUD31P25337 157 aaPredicted RBP7.11□□□□□ -1.27
SRP1YNL189W YMR1P47147 688 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
SRP1YNL189W NSR1P27476 414 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
SRP1YNL189W PIB1Q06651 286 aa7.09□□□□□ -1.27
SRP1YNL189W DBP1P24784 617 aaKnown RBP7.09□□□□□ -1.28
SRP1YNL189W YOR238WQ08634 303 aa7.08□□□□□ -1.28
SRP1YNL189W MST1P07236 462 aa7.07□□□□□ -1.28
SRP1YNL189W YAP5P40574 245 aa7.06□□□□□ -1.28
SRP1YNL189W UBP9P39967 754 aa7.05□□□□□ -1.28
SRP1YNL189W COQ8P27697 501 aa7.05□□□□□ -1.28
SRP1YNL189W EDS1P38073 919 aa7.03□□□□□ -1.28
SRP1YNL189W MIF2P35201 549 aa7.01□□□□□ -1.29
SRP1YNL189W VPS70P47161 811 aa6.99□□□□□ -1.29
SRP1YNL189W YPR148CQ06523 435 aa6.98□□□□□ -1.29
SRP1YNL189W VMA1P17255 1071 aaKnown RBP6.94□□□□□ -1.3
SRP1YNL189W PTC3P34221 468 aaKnown RBP6.92□□□□□ -1.3
SRP1YNL189W IFH1P39520 1085 aa6.89□□□□□ -1.31
SRP1YNL189W GTT3P39996 337 aa6.88□□□□□ -1.31
SRP1YNL189W YBL029C-AQ3E756 94 aa6.88□□□□□ -1.31
SRP1YNL189W NOP53Q12080 455 aaKnown RBP6.87□□□□□ -1.31
SRP1YNL189W LEU3P08638 886 aa6.85□□□□□ -1.31
SRP1YNL189W SPB4P25808 606 aaPredicted RBP6.85□□□□□ -1.31
SRP1YNL189W VNX1P42839 908 aa6.85□□□□□ -1.31
SRP1YNL189W CKB1P43639 278 aa6.85□□□□□ -1.31
SRP1YNL189W SAM3Q08986 587 aa6.84□□□□□ -1.31
SRP1YNL189W WSC3Q12215 556 aa6.83□□□□□ -1.32
SRP1YNL189W SIS1P25294 352 aaKnown RBP6.81□□□□□ -1.32
SRP1YNL189W GRE2Q12068 342 aaKnown RBP6.81□□□□□ -1.32
SRP1YNL189W PBS2P08018 668 aa6.8□□□□□ -1.32
SRP1YNL189W LEO1P38439 464 aa6.79□□□□□ -1.32
SRP1YNL189W ATH1P48016 1211 aa6.79□□□□□ -1.32
SRP1YNL189W YOL036WQ08206 761 aa6.79□□□□□ -1.32
SRP1YNL189W GYP5Q12344 894 aa6.79□□□□□ -1.32
SRP1YNL189W SET4P42948 560 aa6.79□□□□□ -1.32
SRP1YNL189W SPP1Q03012 353 aa6.79□□□□□ -1.32
SRP1YNL189W SOL3P38858 249 aa6.78□□□□□ -1.32
SRP1YNL189W REF2P42073 533 aaPredicted RBP6.78□□□□□ -1.32
SRP1YNL189W GUT1P32190 709 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms