RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	LPD1	P09624	499 aa	Known RBP	4.2	□□□□□ -1.74
HRT3	YLR097C	SEC63	P14906	663 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	URA4	P20051	364 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	RPI1	P23250	407 aa	Known RBP	4.2	□□□□□ -1.74
HRT3	YLR097C	CPR2	P23285	205 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	BRF1	P29056	596 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	BEM1	P29366	551 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	ECM25	P32525	599 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	GLC7	P32598	312 aa	Known RBP	4.2	□□□□□ -1.74
HRT3	YLR097C	YCR041W	P37265	110 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	YHR054C	P38780	354 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	SAS2	P40963	338 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	YDL186W	P48568	277 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	YIP1	P53039	248 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	PIR3	Q03180	325 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	HOT1	Q03213	719 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	YMR130W	Q04223	302 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	RKM1	Q08961	583 aa	Predicted RBP	4.2	□□□□□ -1.74
HRT3	YLR097C	MED2	Q12124	431 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	YBR298C-A	Q8TGK4	73 aa		4.2	□□□□□ -1.74
HRT3	YLR097C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
HRT3	YLR097C	RHB1	P25378	209 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	RFC3	P38629	340 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	GCD10	P41814	478 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	TRS85	P46944	698 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	TCB2	P48231	1178 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	AVT4	P50944	713 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	POP6	P53218	158 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	CAF40	P53829	373 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	ARK1	P53974	638 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	ACL4	Q03771	387 aa		4.19	□□□□□ -1.74
HRT3	YLR097C	HIP1	P06775	603 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	SLM4	P38247	162 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	RRT2	P38332	387 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	SSN8	P47821	323 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	RSC1	P53236	928 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	RPT4	P53549	437 aa	Known RBP	4.18	□□□□□ -1.74
HRT3	YLR097C	CIK1	Q01649	594 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	MDM30	Q05930	598 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	DIS3	Q08162	1001 aa	Known RBP	4.18	□□□□□ -1.74
HRT3	YLR097C	MUM3	Q08750	479 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	VPS54	Q12071	889 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	YMR230W-A	Q3E7B5	62 aa		4.18	□□□□□ -1.74
HRT3	YLR097C	HOM3	P10869	527 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	PEX5	P35056	612 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	YBP1	P38315	674 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	DCS1	Q06151	350 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	MMR1	Q06324	491 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	REX4	Q08237	289 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	YPL199C	Q08954	240 aa		4.17	□□□□□ -1.74
HRT3	YLR097C	SCEI	P03882	235 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	PHO2	P07269	559 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	GEX1	P25596	615 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	AGA1	P32323	725 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	RRT5	P43607	289 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	WSC2	P53832	503 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	MRP51	Q02950	344 aa		4.16	□□□□□ -1.74
HRT3	YLR097C	CPR1	P14832	162 aa	Known RBP	4.15	□□□□□ -1.75
HRT3	YLR097C	SOR1	P35497	357 aa	Known RBP	4.15	□□□□□ -1.75
HRT3	YLR097C	LYS1	P38998	373 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
HRT3	YLR097C	IDP2	P41939	412 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
HRT3	YLR097C	YJL132W	P47014	750 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	YGR111W	P53265	400 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	VPS9	P54787	451 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	RTT103	Q05543	409 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	SOR2	Q07786	357 aa		4.15	□□□□□ -1.75
HRT3	YLR097C	PRP16	P15938	1071 aa	Predicted RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	SPO7	P18410	259 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	RNA14	P25298	677 aa	Known RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	TIP1	P27654	210 aa	Predicted RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	MRP4	P32902	394 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	HMS2	P47175	358 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	MSO1	P53604	210 aa	Known RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	FRE4	P53746	719 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	TAF12	Q03761	539 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	SXM1	Q04175	944 aa	Known RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	SGT1	Q08446	395 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	TIM18	Q08749	192 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	AEP3	Q12089	606 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	YPR022C	Q12139	1133 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	BUG1	Q12191	341 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	PKH2	Q12236	1081 aa	Known RBP	4.14	□□□□□ -1.75
HRT3	YLR097C	MTR10	Q99189	972 aa		4.14	□□□□□ -1.75
HRT3	YLR097C	TY1B-A	O13527	1196 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	ARG4	P04076	463 aa	Predicted RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	SAM1	P10659	382 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	SAM2	P19358	384 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	SMY1	P32364	656 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	NAT2	P37293	288 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	RRN10	P38204	145 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	PCA1	P38360	1216 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	LRP1	P38801	184 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	MST28	P39552	234 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	MKT1	P40850	830 aa	Known RBP	4.13	□□□□□ -1.75
HRT3	YLR097C	IBD2	P53892	351 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	HNT3	Q08702	217 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	YLL056C	Q12177	298 aa		4.13	□□□□□ -1.75
HRT3	YLR097C	PMR1	P13586	950 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms