RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeastyeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT3YLR097C DRS1P32892 752 aaKnown RBP14.44□□□□□ -0.1
HRT3YLR097C MTC1P47018 478 aaKnown RBP14.26□□□□□ -0.13
HRT3YLR097C BFR2Q06631 534 aaKnown RBP12.54□□□□□ -0.4
HRT3YLR097C DIP2Q12220 943 aaPredicted RBP12.25□□□□□ -0.45
HRT3YLR097C AVT3P36062 692 aa12.1□□□□□ -0.47
HRT3YLR097C FAP1P53971 965 aa12.06□□□□□ -0.48
HRT3YLR097C TFA1P36100 482 aa11.87□□□□□ -0.51
HRT3YLR097C ISW2Q08773 1120 aa11.6□□□□□ -0.55
HRT3YLR097C RSE1Q04693 1361 aaKnown RBP11.55□□□□□ -0.56
HRT3YLR097C RPG1P38249 964 aaKnown RBP11.42□□□□□ -0.58
HRT3YLR097C PRI1P10363 409 aa11.38□□□□□ -0.59
HRT3YLR097C PRY3P47033 881 aa11.32□□□□□ -0.6
HRT3YLR097C AAD16Q02895 342 aa11.2□□□□□ -0.62
HRT3YLR097C RPL17AP05740 184 aaKnown RBP11.1□□□□□ -0.63
HRT3YLR097C RPL17BP46990 184 aaKnown RBP11.1□□□□□ -0.63
HRT3YLR097C REB1P21538 810 aa10.97□□□□□ -0.65
HRT3YLR097C TSR3Q12094 313 aaKnown RBP10.82□□□□□ -0.68
HRT3YLR097C SPT21P35209 758 aa10.67□□□□□ -0.7
HRT3YLR097C HAA1Q12753 694 aaKnown RBP10.61□□□□□ -0.71
HRT3YLR097C RIM101P33400 625 aa10.57□□□□□ -0.72
HRT3YLR097C YCK3P39962 524 aa10.51□□□□□ -0.73
HRT3YLR097C MRPL32P25348 183 aa10.43□□□□□ -0.74
HRT3YLR097C YKR023WP36119 530 aaKnown RBP10.3□□□□□ -0.76
HRT3YLR097C PTP3P40048 928 aa10.27□□□□□ -0.77
HRT3YLR097C RQC2Q12532 1038 aaKnown RBP10.26□□□□□ -0.77
HRT3YLR097C OXP1P28273 1286 aa10.23□□□□□ -0.77
HRT3YLR097C SSP1P38871 571 aa10.17□□□□□ -0.78
HRT3YLR097C YIL055CP40523 627 aaKnown RBP10.14□□□□□ -0.79
HRT3YLR097C YAH1Q12184 172 aaKnown RBP10.11□□□□□ -0.79
HRT3YLR097C TFC8Q12308 588 aa10.11□□□□□ -0.79
HRT3YLR097C HOP09932 586 aa10.1□□□□□ -0.79
HRT3YLR097C CDC27P38042 758 aa10.05□□□□□ -0.8
HRT3YLR097C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
HRT3YLR097C DCD1P06773 312 aa10□□□□□ -0.81
HRT3YLR097C YLR271WQ06152 274 aa9.97□□□□□ -0.81
HRT3YLR097C RSM7P47150 247 aa9.96□□□□□ -0.82
HRT3YLR097C BCH2P36122 765 aa9.81□□□□□ -0.84
HRT3YLR097C DMA1P38823 416 aa9.81□□□□□ -0.84
HRT3YLR097C MGA2P40578 1113 aa9.8□□□□□ -0.84
HRT3YLR097C AI2P03876 854 aa9.77□□□□□ -0.85
HRT3YLR097C BBC1P47068 1157 aa9.74□□□□□ -0.85
HRT3YLR097C YGL015CP33199 130 aa9.72□□□□□ -0.85
HRT3YLR097C PSD2P53037 1138 aaKnown RBP9.7□□□□□ -0.86
HRT3YLR097C UBP10P53874 792 aaPredicted RBP9.67□□□□□ -0.86
HRT3YLR097C EPS1P40557 701 aa9.66□□□□□ -0.86
HRT3YLR097C CST9Q06032 482 aa9.66□□□□□ -0.86
HRT3YLR097C SCY1P53009 804 aa9.64□□□□□ -0.87
HRT3YLR097C MAP2P38174 421 aaKnown RBP9.62□□□□□ -0.87
HRT3YLR097C BDF1P35817 686 aa9.58□□□□□ -0.88
HRT3YLR097C MRM1P25270 412 aa9.47□□□□□ -0.89
HRT3YLR097C SLX5P32828 619 aaKnown RBP9.47□□□□□ -0.89
HRT3YLR097C RTG3P38165 486 aa9.38□□□□□ -0.91
HRT3YLR097C RAM2P29703 316 aa9.34□□□□□ -0.91
HRT3YLR097C RCR1P38212 213 aa9.31□□□□□ -0.92
HRT3YLR097C TIF4632P39936 914 aaKnown RBP9.3□□□□□ -0.92
HRT3YLR097C SAS10Q12136 610 aaPredicted RBP9.26□□□□□ -0.93
HRT3YLR097C VPS29P38759 282 aa9.23□□□□□ -0.93
HRT3YLR097C MAK11P20484 414 aaKnown RBP9.21□□□□□ -0.94
HRT3YLR097C TGL3P40308 642 aa9.2□□□□□ -0.94
HRT3YLR097C SET1P38827 1080 aaKnown RBP9.19□□□□□ -0.94
HRT3YLR097C YMR1P47147 688 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
HRT3YLR097C BUD31P25337 157 aaPredicted RBP9.13□□□□□ -0.95
HRT3YLR097C NSR1P27476 414 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
HRT3YLR097C YOR238WQ08634 303 aa9.12□□□□□ -0.95
HRT3YLR097C DBP1P24784 617 aaKnown RBP9.11□□□□□ -0.95
HRT3YLR097C IFH1P39520 1085 aa9.1□□□□□ -0.95
HRT3YLR097C YAP5P40574 245 aa9.1□□□□□ -0.95
HRT3YLR097C STS1P38637 319 aa9.09□□□□□ -0.95
HRT3YLR097C COQ8P27697 501 aa9.08□□□□□ -0.96
HRT3YLR097C YFR006WP43590 535 aa9.07□□□□□ -0.96
HRT3YLR097C YPR148CQ06523 435 aa9.05□□□□□ -0.96
HRT3YLR097C MIF2P35201 549 aa9.04□□□□□ -0.96
HRT3YLR097C VPS70P47161 811 aa9.03□□□□□ -0.96
HRT3YLR097C NOP53Q12080 455 aaKnown RBP9.03□□□□□ -0.96
HRT3YLR097C CKB1P43639 278 aa9.01□□□□□ -0.97
HRT3YLR097C LEU3P08638 886 aa9□□□□□ -0.97
HRT3YLR097C PIB1Q06651 286 aa8.99□□□□□ -0.97
HRT3YLR097C EDS1P38073 919 aa8.97□□□□□ -0.97
HRT3YLR097C LEO1P38439 464 aa8.97□□□□□ -0.97
HRT3YLR097C MST1P07236 462 aa8.93□□□□□ -0.98
HRT3YLR097C VMA1P17255 1071 aaKnown RBP8.92□□□□□ -0.98
HRT3YLR097C SPB4P25808 606 aaPredicted RBP8.92□□□□□ -0.98
HRT3YLR097C PTC3P34221 468 aaKnown RBP8.91□□□□□ -0.98
HRT3YLR097C GTT3P39996 337 aa8.88□□□□□ -0.99
HRT3YLR097C SAM3Q08986 587 aa8.84□□□□□ -0.99
HRT3YLR097C ATH1P48016 1211 aa8.83□□□□□ -1
HRT3YLR097C PBS2P08018 668 aa8.82□□□□□ -1
HRT3YLR097C REF2P42073 533 aaPredicted RBP8.82□□□□□ -1
HRT3YLR097C GRE2Q12068 342 aaKnown RBP8.82□□□□□ -1
HRT3YLR097C GUT1P32190 709 aa8.79□□□□□ -1
HRT3YLR097C DSF2P38213 736 aa8.79□□□□□ -1
HRT3YLR097C RPN1P38764 993 aaKnown RBP8.78□□□□□ -1
HRT3YLR097C GYP5Q12344 894 aa8.78□□□□□ -1
HRT3YLR097C UBP9P39967 754 aa8.74□□□□□ -1.01
HRT3YLR097C MAK21Q12176 1025 aaKnown RBP8.73□□□□□ -1.01
HRT3YLR097C ABP1P15891 592 aaKnown RBP8.72□□□□□ -1.01
HRT3YLR097C YOL036WQ08206 761 aa8.72□□□□□ -1.01
HRT3YLR097C MAM3Q12296 706 aa8.71□□□□□ -1.02
HRT3YLR097C SIS1P25294 352 aaKnown RBP8.7□□□□□ -1.02
HRT3YLR097C SET4P42948 560 aa8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms