RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C NCS2P53923 493 aaPredicted RBP2.37□□□□□ -2.03
CMS1YLR003C SLG1P54867 378 aa2.37□□□□□ -2.03
CMS1YLR003C GIR2Q03768 265 aaPredicted RBP2.37□□□□□ -2.03
CMS1YLR003C SFI1Q12369 946 aa2.37□□□□□ -2.03
CMS1YLR003C NDI1P32340 513 aa2.36□□□□□ -2.03
CMS1YLR003C NIP100P33420 868 aa2.36□□□□□ -2.03
CMS1YLR003C MFT1P33441 392 aaKnown RBP2.36□□□□□ -2.03
CMS1YLR003C PAD1P33751 242 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
CMS1YLR003C YCR041WP37265 110 aa2.36□□□□□ -2.03
CMS1YLR003C HAT2P39984 401 aa2.36□□□□□ -2.03
CMS1YLR003C YIL067CP40514 678 aa2.36□□□□□ -2.03
CMS1YLR003C AVT4P50944 713 aa2.36□□□□□ -2.03
CMS1YLR003C POP6P53218 158 aa2.36□□□□□ -2.03
CMS1YLR003C RPA49Q01080 415 aaPredicted RBP2.36□□□□□ -2.03
CMS1YLR003C YDR387CQ04162 555 aa2.36□□□□□ -2.03
CMS1YLR003C SOV1Q04748 898 aa2.36□□□□□ -2.03
CMS1YLR003C RRP45Q05636 305 aaKnown RBP2.36□□□□□ -2.03
CMS1YLR003C RRG7Q08774 242 aaPredicted RBP2.36□□□□□ -2.03
CMS1YLR003C YPL199CQ08954 240 aa2.36□□□□□ -2.03
CMS1YLR003C KEL3Q08979 651 aaPredicted RBP2.36□□□□□ -2.03
CMS1YLR003C TMS1Q12116 473 aa2.36□□□□□ -2.03
CMS1YLR003C SCM3Q12334 223 aa2.36□□□□□ -2.03
CMS1YLR003C CTF3Q12748 733 aa2.36□□□□□ -2.03
CMS1YLR003C SUP35P05453 685 aaKnown RBP2.35□□□□□ -2.03
CMS1YLR003C SAM1P10659 382 aaKnown RBP2.35□□□□□ -2.03
CMS1YLR003C CLN3P13365 580 aa2.35□□□□□ -2.03
CMS1YLR003C SAM2P19358 384 aaKnown RBP2.35□□□□□ -2.03
CMS1YLR003C YCR100CP25606 316 aa2.35□□□□□ -2.03
CMS1YLR003C TFB1P32776 642 aa2.35□□□□□ -2.03
CMS1YLR003C MPE1P35728 441 aaKnown RBP2.35□□□□□ -2.03
CMS1YLR003C STB6P36085 766 aa2.35□□□□□ -2.03
CMS1YLR003C NTC20P38302 140 aaPredicted RBP2.35□□□□□ -2.03
CMS1YLR003C NDT80P38830 627 aa2.35□□□□□ -2.03
CMS1YLR003C YGL138CP53122 345 aa2.35□□□□□ -2.03
CMS1YLR003C CAF40P53829 373 aa2.35□□□□□ -2.03
CMS1YLR003C TAP42Q04372 366 aa2.35□□□□□ -2.03
CMS1YLR003C HRT3Q12347 344 aa2.35□□□□□ -2.03
CMS1YLR003C AFI1Q99222 893 aa2.35□□□□□ -2.03
CMS1YLR003C BEM1P29366 551 aa2.34□□□□□ -2.03
CMS1YLR003C CRM1P30822 1084 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C DBF4P32325 704 aa2.34□□□□□ -2.03
CMS1YLR003C MRP4P32902 394 aa2.34□□□□□ -2.03
CMS1YLR003C YBL059WP34224 193 aa2.34□□□□□ -2.03
CMS1YLR003C YMR147WP40218 223 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C WWM1P43582 211 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C RPS0BP46654 252 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C FMS1P50264 508 aa2.34□□□□□ -2.03
CMS1YLR003C GOR1P53839 350 aa2.34□□□□□ -2.03
CMS1YLR003C IGO1P53897 168 aa2.34□□□□□ -2.03
CMS1YLR003C PNG1Q02890 363 aa2.34□□□□□ -2.03
CMS1YLR003C ARX1Q03862 593 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C HSP31Q04432 237 aa2.34□□□□□ -2.03
CMS1YLR003C MUM3Q08750 479 aa2.34□□□□□ -2.03
CMS1YLR003C PGA3Q12746 312 aaKnown RBP2.34□□□□□ -2.03
CMS1YLR003C GPH1P06738 902 aaKnown RBP2.33□□□□□ -2.04
CMS1YLR003C LPD1P09624 499 aaKnown RBP2.33□□□□□ -2.04
CMS1YLR003C CLC1P17891 233 aa2.33□□□□□ -2.04
CMS1YLR003C YCR051WP25631 222 aa2.33□□□□□ -2.04
CMS1YLR003C GLC7P32598 312 aaKnown RBP2.33□□□□□ -2.04
CMS1YLR003C RML2P32611 393 aa2.33□□□□□ -2.04
CMS1YLR003C NFU1P32860 256 aa2.33□□□□□ -2.04
CMS1YLR003C NAT2P37293 288 aa2.33□□□□□ -2.04
CMS1YLR003C MMS4P38257 691 aa2.33□□□□□ -2.04
CMS1YLR003C YHR054CP38780 354 aa2.33□□□□□ -2.04
CMS1YLR003C GCD10P41814 478 aa2.33□□□□□ -2.04
CMS1YLR003C TFG2P41896 400 aaPredicted RBP2.33□□□□□ -2.04
CMS1YLR003C YIP1P53039 248 aa2.33□□□□□ -2.04
CMS1YLR003C OGG1P53397 376 aaPredicted RBP2.33□□□□□ -2.04
CMS1YLR003C ELP3Q02908 557 aaKnown RBP2.33□□□□□ -2.04
CMS1YLR003C ROY1Q04847 553 aa2.33□□□□□ -2.04
CMS1YLR003C MRPL35Q06678 367 aa2.33□□□□□ -2.04
CMS1YLR003C REX4Q08237 289 aa2.33□□□□□ -2.04
CMS1YLR003C VAM3Q12241 283 aa2.33□□□□□ -2.04
CMS1YLR003C ERV2Q12284 196 aa2.33□□□□□ -2.04
CMS1YLR003C ISA2Q12425 185 aa2.33□□□□□ -2.04
CMS1YLR003C URA4P20051 364 aa2.32□□□□□ -2.04
CMS1YLR003C RHB1P25378 209 aa2.32□□□□□ -2.04
CMS1YLR003C PRP21P32524 280 aaPredicted RBP2.32□□□□□ -2.04
CMS1YLR003C ECM25P32525 599 aa2.32□□□□□ -2.04
CMS1YLR003C GYP6P32806 458 aa2.32□□□□□ -2.04
CMS1YLR003C YME2P32843 850 aa2.32□□□□□ -2.04
CMS1YLR003C APE3P37302 537 aaKnown RBP2.32□□□□□ -2.04
CMS1YLR003C LSM5P40089 93 aaKnown RBP2.32□□□□□ -2.04
CMS1YLR003C LAM5P43560 674 aa2.32□□□□□ -2.04
CMS1YLR003C NCA3P46955 337 aa2.32□□□□□ -2.04
CMS1YLR003C ECM27P47144 725 aa2.32□□□□□ -2.04
CMS1YLR003C HMS2P47175 358 aa2.32□□□□□ -2.04
CMS1YLR003C RMT2Q03305 412 aa2.32□□□□□ -2.04
CMS1YLR003C DIS3Q08162 1001 aaKnown RBP2.32□□□□□ -2.04
CMS1YLR003C THP3Q12049 470 aaKnown RBP2.32□□□□□ -2.04
CMS1YLR003C YPR022CQ12139 1133 aa2.32□□□□□ -2.04
CMS1YLR003C RRD2Q12461 358 aa2.32□□□□□ -2.04
CMS1YLR003C HIS4P00815 799 aaKnown RBP2.31□□□□□ -2.04
CMS1YLR003C HHF1P02309 103 aaKnown RBP2.31□□□□□ -2.04
CMS1YLR003C SPO7P18410 259 aa2.31□□□□□ -2.04
CMS1YLR003C RPC53P25441 422 aa2.31□□□□□ -2.04
CMS1YLR003C OST1P41543 476 aaKnown RBP2.31□□□□□ -2.04
CMS1YLR003C VMA13P41807 478 aaKnown RBP2.31□□□□□ -2.04
CMS1YLR003C PHB2P50085 310 aa2.31□□□□□ -2.04
CMS1YLR003C YGR250CP53316 781 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 108.3 ms