RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C APE3P37302 537 aaKnown RBP3.32□□□□□ -1.88
CCE1YKL011C RFC3P38629 340 aa3.32□□□□□ -1.88
CCE1YKL011C GCD10P41814 478 aa3.32□□□□□ -1.88
CCE1YKL011C TRS85P46944 698 aa3.32□□□□□ -1.88
CCE1YKL011C TCB2P48231 1178 aa3.32□□□□□ -1.88
CCE1YKL011C AVT4P50944 713 aa3.32□□□□□ -1.88
CCE1YKL011C YML6P51998 286 aa3.32□□□□□ -1.88
CCE1YKL011C COS10P52924 374 aa3.32□□□□□ -1.88
CCE1YKL011C RSC1P53236 928 aa3.32□□□□□ -1.88
CCE1YKL011C OGG1P53397 376 aaPredicted RBP3.32□□□□□ -1.88
CCE1YKL011C ARK1P53974 638 aa3.32□□□□□ -1.88
CCE1YKL011C PNG1Q02890 363 aa3.32□□□□□ -1.88
CCE1YKL011C SMA2Q04658 369 aa3.32□□□□□ -1.88
CCE1YKL011C HSP42Q12329 375 aa3.32□□□□□ -1.88
CCE1YKL011C CTF3Q12748 733 aa3.32□□□□□ -1.88
CCE1YKL011C GDH1P07262 454 aaKnown RBP3.31□□□□□ -1.88
CCE1YKL011C YAR066WP0CX18 203 aa3.31□□□□□ -1.88
CCE1YKL011C YHR214WP0CX19 203 aa3.31□□□□□ -1.88
CCE1YKL011C ATR1P13090 542 aa3.31□□□□□ -1.88
CCE1YKL011C CPR2P23285 205 aa3.31□□□□□ -1.88
CCE1YKL011C RHB1P25378 209 aa3.31□□□□□ -1.88
CCE1YKL011C KRE2P27809 442 aa3.31□□□□□ -1.88
CCE1YKL011C ECM25P32525 599 aa3.31□□□□□ -1.88
CCE1YKL011C YCR041WP37265 110 aa3.31□□□□□ -1.88
CCE1YKL011C SLM4P38247 162 aa3.31□□□□□ -1.88
CCE1YKL011C RRT2P38332 387 aa3.31□□□□□ -1.88
CCE1YKL011C YJL213WP40896 331 aa3.31□□□□□ -1.88
CCE1YKL011C YDL186WP48568 277 aa3.31□□□□□ -1.88
CCE1YKL011C ODC1Q03028 310 aa3.31□□□□□ -1.88
CCE1YKL011C PIR3Q03180 325 aa3.31□□□□□ -1.88
CCE1YKL011C ACL4Q03771 387 aa3.31□□□□□ -1.88
CCE1YKL011C YMR130WQ04223 302 aa3.31□□□□□ -1.88
CCE1YKL011C PUT3P25502 979 aaPredicted RBP3.3□□□□□ -1.88
CCE1YKL011C GEX1P25596 615 aa3.3□□□□□ -1.88
CCE1YKL011C BRF1P29056 596 aa3.3□□□□□ -1.88
CCE1YKL011C GLC7P32598 312 aaKnown RBP3.3□□□□□ -1.88
CCE1YKL011C MMS4P38257 691 aa3.3□□□□□ -1.88
CCE1YKL011C YHR054CP38780 354 aa3.3□□□□□ -1.88
CCE1YKL011C YJR011CP47086 261 aaPredicted RBP3.3□□□□□ -1.88
CCE1YKL011C YIP1P53039 248 aa3.3□□□□□ -1.88
CCE1YKL011C WSC2P53832 503 aa3.3□□□□□ -1.88
CCE1YKL011C HOT1Q03213 719 aa3.3□□□□□ -1.88
CCE1YKL011C MMR1Q06324 491 aa3.3□□□□□ -1.88
CCE1YKL011C DIS3Q08162 1001 aaKnown RBP3.3□□□□□ -1.88
CCE1YKL011C RKM1Q08961 583 aaPredicted RBP3.3□□□□□ -1.88
CCE1YKL011C PPT2Q12036 173 aa3.3□□□□□ -1.88
CCE1YKL011C VPS54Q12071 889 aa3.3□□□□□ -1.88
CCE1YKL011C YBR298C-AQ8TGK4 73 aa3.3□□□□□ -1.88
CCE1YKL011C HIS4P00815 799 aaKnown RBP3.29□□□□□ -1.88
CCE1YKL011C HIP1P06775 603 aa3.29□□□□□ -1.88
CCE1YKL011C MDH1P17505 334 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
CCE1YKL011C CLN1P20437 546 aa3.29□□□□□ -1.88
CCE1YKL011C AGA1P32323 725 aa3.29□□□□□ -1.88
CCE1YKL011C RRT5P43607 289 aa3.29□□□□□ -1.88
CCE1YKL011C ECM27P47144 725 aa3.29□□□□□ -1.88
CCE1YKL011C POP6P53218 158 aa3.29□□□□□ -1.88
CCE1YKL011C RNA14P25298 677 aaKnown RBP3.28□□□□□ -1.88
CCE1YKL011C SOR1P35497 357 aaKnown RBP3.28□□□□□ -1.88
CCE1YKL011C RPT4P53549 437 aaKnown RBP3.28□□□□□ -1.88
CCE1YKL011C DCS1Q06151 350 aa3.28□□□□□ -1.88
CCE1YKL011C SOR2Q07786 357 aa3.28□□□□□ -1.88
CCE1YKL011C TY1B-AO13527 1196 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C SCEIP03882 235 aa3.27□□□□□ -1.89
CCE1YKL011C LPD1P09624 499 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C SAM1P10659 382 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C PRP16P15938 1071 aaPredicted RBP3.27□□□□□ -1.89
CCE1YKL011C SPO7P18410 259 aa3.27□□□□□ -1.89
CCE1YKL011C SAM2P19358 384 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C CRM1P30822 1084 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C PEX5P35056 612 aa3.27□□□□□ -1.89
CCE1YKL011C KRE9P39005 276 aa3.27□□□□□ -1.89
CCE1YKL011C SER3P40054 469 aa3.27□□□□□ -1.89
CCE1YKL011C CAF40P53829 373 aa3.27□□□□□ -1.89
CCE1YKL011C OCA2P53949 197 aa3.27□□□□□ -1.89
CCE1YKL011C CIK1Q01649 594 aa3.27□□□□□ -1.89
CCE1YKL011C GYL1Q04322 720 aa3.27□□□□□ -1.89
CCE1YKL011C HEL2Q05580 639 aaKnown RBP3.27□□□□□ -1.89
CCE1YKL011C MUM3Q08750 479 aa3.27□□□□□ -1.89
CCE1YKL011C YPL199CQ08954 240 aa3.27□□□□□ -1.89
CCE1YKL011C YPR022CQ12139 1133 aa3.27□□□□□ -1.89
CCE1YKL011C GPM3Q12326 303 aa3.27□□□□□ -1.89
CCE1YKL011C CPR1P14832 162 aaKnown RBP3.26□□□□□ -1.89
CCE1YKL011C TIP1P27654 210 aaPredicted RBP3.26□□□□□ -1.89
CCE1YKL011C MRP4P32902 394 aa3.26□□□□□ -1.89
CCE1YKL011C RRN10P38204 145 aa3.26□□□□□ -1.89
CCE1YKL011C LRP1P38801 184 aaKnown RBP3.26□□□□□ -1.89
CCE1YKL011C LYS1P38998 373 aaRIP-Chip data3.26□□□□□ -1.89not detected
CCE1YKL011C IDP2P41939 412 aa3.26□□□□□ -1.89
CCE1YKL011C PHO86P46956 311 aa3.26□□□□□ -1.89
CCE1YKL011C HMS2P47175 358 aa3.26□□□□□ -1.89
CCE1YKL011C YGR111WP53265 400 aa3.26□□□□□ -1.89
CCE1YKL011C FRE4P53746 719 aa3.26□□□□□ -1.89
CCE1YKL011C MRP51Q02950 344 aa3.26□□□□□ -1.89
CCE1YKL011C REX4Q08237 289 aa3.26□□□□□ -1.89
CCE1YKL011C MED2Q12124 431 aa3.26□□□□□ -1.89
CCE1YKL011C ILV5P06168 395 aaKnown RBP3.25□□□□□ -1.89
CCE1YKL011C CHS1P08004 1131 aa3.25□□□□□ -1.89
CCE1YKL011C SMY1P32364 656 aaKnown RBP3.25□□□□□ -1.89
CCE1YKL011C RRP4P38792 359 aaKnown RBP3.25□□□□□ -1.89
CCE1YKL011C MKT1P40850 830 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms