RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C RRT2P38332 387 aa2.83□□□□□ -1.96
TCD1YHR003C TIF5P38431 405 aaKnown RBP2.83□□□□□ -1.96
TCD1YHR003C WSS1P38838 269 aa2.83□□□□□ -1.96
TCD1YHR003C MET30P39014 640 aa2.83□□□□□ -1.96
TCD1YHR003C HXT14P42833 540 aa2.83□□□□□ -1.96
TCD1YHR003C LOC1P43586 204 aaPredicted RBP2.83□□□□□ -1.96
TCD1YHR003C CTK2P46962 323 aa2.83□□□□□ -1.96
TCD1YHR003C SMC3P47037 1230 aa2.83□□□□□ -1.96
TCD1YHR003C VID30P53076 958 aa2.83□□□□□ -1.96
TCD1YHR003C RPN9Q04062 393 aaKnown RBP2.83□□□□□ -1.96
TCD1YHR003C PPM1Q04081 328 aa2.83□□□□□ -1.96
TCD1YHR003C ECM18Q04623 453 aa2.83□□□□□ -1.96
TCD1YHR003C RBS1Q05672 457 aaKnown RBP2.83□□□□□ -1.96
TCD1YHR003C ATG38Q05789 226 aaKnown RBP2.83□□□□□ -1.96
TCD1YHR003C VPS54Q12071 889 aa2.83□□□□□ -1.96
TCD1YHR003C YLR112WQ12130 139 aa2.83□□□□□ -1.96
TCD1YHR003C TEL1P38110 2787 aa2.83□□□□□ -1.96
TCD1YHR003C YER145C-AA0A023PYF4 145 aa2.82□□□□□ -1.96
TCD1YHR003C CDC15P27636 974 aa2.82□□□□□ -1.96
TCD1YHR003C IDH2P28241 369 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C FAA1P30624 700 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C CRM1P30822 1084 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C YME2P32843 850 aa2.82□□□□□ -1.96
TCD1YHR003C TCD2P36101 447 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C MRPL4P36517 319 aa2.82□□□□□ -1.96
TCD1YHR003C ADE17P38009 592 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C SLM4P38247 162 aa2.82□□□□□ -1.96
TCD1YHR003C YTA12P40341 825 aa2.82□□□□□ -1.96
TCD1YHR003C YIL169CP40442 995 aa2.82□□□□□ -1.96
TCD1YHR003C GCN20P43535 752 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C EPL1P43572 832 aa2.82□□□□□ -1.96
TCD1YHR003C KEL2P50090 882 aa2.82□□□□□ -1.96
TCD1YHR003C LCL3P53153 274 aa2.82□□□□□ -1.96
TCD1YHR003C RHO5P53879 331 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C BUD22Q04347 519 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C STP3Q05937 343 aa2.82□□□□□ -1.96
TCD1YHR003C YFH1Q07540 174 aa2.82□□□□□ -1.96
TCD1YHR003C RRT8Q08219 342 aa2.82□□□□□ -1.96
TCD1YHR003C PLP2Q12017 286 aa2.82□□□□□ -1.96
TCD1YHR003C PFK27Q12471 397 aaPredicted RBP2.82□□□□□ -1.96
TCD1YHR003C TFB5Q3E7C1 72 aaPredicted RBP2.82□□□□□ -1.96
TCD1YHR003C MHP1P43638 1398 aa2.82□□□□□ -1.96
TCD1YHR003C ROM2P51862 1356 aaKnown RBP2.82□□□□□ -1.96
TCD1YHR003C CBP2P03874 630 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C ARD1P07347 238 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C LPD1P09624 499 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C GCD2P12754 651 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C PUT4P15380 627 aa2.81□□□□□ -1.96
TCD1YHR003C MER1P16523 270 aa2.81□□□□□ -1.96
TCD1YHR003C SRP54P20424 541 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C UBA1P22515 1024 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C MRPL25P23369 157 aa2.81□□□□□ -1.96
TCD1YHR003C HMX1P32339 317 aa2.81□□□□□ -1.96
TCD1YHR003C NDI1P32340 513 aa2.81□□□□□ -1.96
TCD1YHR003C HXT3P32466 567 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C MRP4P32902 394 aa2.81□□□□□ -1.96
TCD1YHR003C LHS1P36016 881 aa2.81□□□□□ -1.96
TCD1YHR003C MNN2P38069 597 aa2.81□□□□□ -1.96
TCD1YHR003C THI2P38141 450 aa2.81□□□□□ -1.96
TCD1YHR003C RFC3P38629 340 aa2.81□□□□□ -1.96
TCD1YHR003C DED81P38707 554 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C RTT107P38850 1070 aa2.81□□□□□ -1.96
TCD1YHR003C MLH1P38920 769 aa2.81□□□□□ -1.96
TCD1YHR003C SEC31P38968 1273 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C SEC24P40482 926 aaKnown RBP2.81□□□□□ -1.96
TCD1YHR003C RAD17P48581 401 aa2.81□□□□□ -1.96
TCD1YHR003C FMS1P50264 508 aa2.81□□□□□ -1.96
TCD1YHR003C YNL143CP53908 130 aa2.81□□□□□ -1.96
TCD1YHR003C AQR1P53943 586 aa2.81□□□□□ -1.96
TCD1YHR003C BET4Q00618 327 aa2.81□□□□□ -1.96
TCD1YHR003C SKO1Q02100 647 aa2.81□□□□□ -1.96
TCD1YHR003C IZH1Q03419 316 aa2.81□□□□□ -1.96
TCD1YHR003C RPC11Q04307 110 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C MCP2Q06567 569 aa2.81□□□□□ -1.96
TCD1YHR003C GPN2Q08726 347 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C NDD1Q08887 554 aa2.81□□□□□ -1.96
TCD1YHR003C FMP40Q08968 688 aaPredicted RBP2.81□□□□□ -1.96
TCD1YHR003C YDR061WQ12298 539 aa2.81□□□□□ -1.96
TCD1YHR003C MF(ALPHA)1P01149 165 aa2.8□□□□□ -1.96
TCD1YHR003C CBP1P07252 654 aa2.8□□□□□ -1.96
TCD1YHR003C GAL7P08431 366 aa2.8□□□□□ -1.96
TCD1YHR003C PDA1P16387 420 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C EST1P17214 699 aaPredicted RBP2.8□□□□□ -1.96
TCD1YHR003C RDS1P25611 832 aa2.8□□□□□ -1.96
TCD1YHR003C SMY1P32364 656 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C SSE2P32590 693 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C RGT1P32862 1170 aa2.8□□□□□ -1.96
TCD1YHR003C RPT5P33297 434 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C SOF1P33750 489 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C TIF3P34167 436 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
TCD1YHR003C AAP1P37898 856 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C ATP3P38077 311 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C PEX32P38292 413 aa2.8□□□□□ -1.96
TCD1YHR003C NTC20P38302 140 aaPredicted RBP2.8□□□□□ -1.96
TCD1YHR003C PEX18P38855 283 aa2.8□□□□□ -1.96
TCD1YHR003C MNN9P39107 395 aaKnown RBP2.8□□□□□ -1.96
TCD1YHR003C SER3P40054 469 aa2.8□□□□□ -1.96
TCD1YHR003C SEC9P40357 651 aa2.8□□□□□ -1.96
TCD1YHR003C INA22P40576 216 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms