RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C MTC1P47018 478 aaKnown RBP10.32□□□□□ -0.76
TCD1YHR003C DRS1P32892 752 aaKnown RBP9.99□□□□□ -0.81
TCD1YHR003C FAP1P53971 965 aa9.52□□□□□ -0.89
TCD1YHR003C PRY3P47033 881 aa9.01□□□□□ -0.97
TCD1YHR003C DIP2Q12220 943 aaPredicted RBP8.64□□□□□ -1.03
TCD1YHR003C YCK3P39962 524 aa8.54□□□□□ -1.04
TCD1YHR003C PRI1P10363 409 aa8.51□□□□□ -1.05
TCD1YHR003C ISW2Q08773 1120 aa8.51□□□□□ -1.05
TCD1YHR003C BFR2Q06631 534 aaKnown RBP8.48□□□□□ -1.05
TCD1YHR003C AVT3P36062 692 aa8.42□□□□□ -1.06
TCD1YHR003C AAD16Q02895 342 aa8.42□□□□□ -1.06
TCD1YHR003C RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
TCD1YHR003C HAA1Q12753 694 aaKnown RBP8.34□□□□□ -1.07
TCD1YHR003C RSE1Q04693 1361 aaKnown RBP8.27□□□□□ -1.09
TCD1YHR003C TSR3Q12094 313 aaKnown RBP8.04□□□□□ -1.12
TCD1YHR003C RPL17AP05740 184 aaKnown RBP7.96□□□□□ -1.14
TCD1YHR003C RPL17BP46990 184 aaKnown RBP7.96□□□□□ -1.14
TCD1YHR003C REB1P21538 810 aa7.91□□□□□ -1.14
TCD1YHR003C MRPL32P25348 183 aa7.76□□□□□ -1.17
TCD1YHR003C TFA1P36100 482 aa7.75□□□□□ -1.17
TCD1YHR003C SPT21P35209 758 aa7.64□□□□□ -1.19
TCD1YHR003C YGL015CP33199 130 aa7.48□□□□□ -1.21
TCD1YHR003C YKR023WP36119 530 aaKnown RBP7.48□□□□□ -1.21
TCD1YHR003C RIM101P33400 625 aa7.46□□□□□ -1.22
TCD1YHR003C BUD31P25337 157 aaPredicted RBP7.43□□□□□ -1.22
TCD1YHR003C CDC27P38042 758 aa7.4□□□□□ -1.22
TCD1YHR003C TFC8Q12308 588 aa7.33□□□□□ -1.24
TCD1YHR003C HOP09932 586 aa7.31□□□□□ -1.24
TCD1YHR003C DCD1P06773 312 aa7.25□□□□□ -1.25
TCD1YHR003C OXP1P28273 1286 aa7.21□□□□□ -1.26
TCD1YHR003C UBP10P53874 792 aaPredicted RBP7.18□□□□□ -1.26
TCD1YHR003C YIL055CP40523 627 aaKnown RBP7.14□□□□□ -1.27
TCD1YHR003C MAP2P38174 421 aaKnown RBP7.13□□□□□ -1.27
TCD1YHR003C BCH2P36122 765 aa7.1□□□□□ -1.27
TCD1YHR003C PTP3P40048 928 aa7.1□□□□□ -1.27
TCD1YHR003C SCY1P53009 804 aa7.06□□□□□ -1.28
TCD1YHR003C YAH1Q12184 172 aaKnown RBP7.04□□□□□ -1.28
TCD1YHR003C RSM7P47150 247 aa7.02□□□□□ -1.29
TCD1YHR003C SLX5P32828 619 aaKnown RBP6.97□□□□□ -1.29
TCD1YHR003C SSP1P38871 571 aa6.97□□□□□ -1.29
TCD1YHR003C EPS1P40557 701 aa6.96□□□□□ -1.3
TCD1YHR003C YLR271WQ06152 274 aa6.95□□□□□ -1.3
TCD1YHR003C SIS1P25294 352 aaKnown RBP6.94□□□□□ -1.3
TCD1YHR003C BBC1P47068 1157 aa6.93□□□□□ -1.3
TCD1YHR003C AI2P03876 854 aa6.92□□□□□ -1.3
TCD1YHR003C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
TCD1YHR003C BDF1P35817 686 aa6.91□□□□□ -1.3
TCD1YHR003C TIF4632P39936 914 aaKnown RBP6.91□□□□□ -1.3
TCD1YHR003C TGL3P40308 642 aa6.86□□□□□ -1.31
TCD1YHR003C PSD2P53037 1138 aaKnown RBP6.82□□□□□ -1.32
TCD1YHR003C MGA2P40578 1113 aa6.78□□□□□ -1.32
TCD1YHR003C CST9Q06032 482 aa6.71□□□□□ -1.34
TCD1YHR003C UBP9P39967 754 aa6.69□□□□□ -1.34
TCD1YHR003C MRM1P25270 412 aa6.68□□□□□ -1.34
TCD1YHR003C NSR1P27476 414 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
TCD1YHR003C YAP5P40574 245 aa6.62□□□□□ -1.35
TCD1YHR003C YOR238WQ08634 303 aa6.62□□□□□ -1.35
TCD1YHR003C MST1P07236 462 aa6.61□□□□□ -1.35
TCD1YHR003C RTG3P38165 486 aa6.59□□□□□ -1.35
TCD1YHR003C VPS29P38759 282 aa6.53□□□□□ -1.36
TCD1YHR003C YMR1P47147 688 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
TCD1YHR003C RCR1P38212 213 aa6.51□□□□□ -1.37
TCD1YHR003C DBP1P24784 617 aaKnown RBP6.47□□□□□ -1.37
TCD1YHR003C GTT3P39996 337 aa6.46□□□□□ -1.38
TCD1YHR003C PIB1Q06651 286 aa6.46□□□□□ -1.38
TCD1YHR003C STS1P38637 319 aa6.44□□□□□ -1.38
TCD1YHR003C RAM2P29703 316 aa6.43□□□□□ -1.38
TCD1YHR003C YFR006WP43590 535 aa6.43□□□□□ -1.38
TCD1YHR003C YBL029C-AQ3E756 94 aa6.41□□□□□ -1.38
TCD1YHR003C MAK11P20484 414 aaKnown RBP6.39□□□□□ -1.39
TCD1YHR003C WSC3Q12215 556 aa6.39□□□□□ -1.39
TCD1YHR003C VMA1P17255 1071 aaKnown RBP6.38□□□□□ -1.39
TCD1YHR003C VNX1P42839 908 aa6.38□□□□□ -1.39
TCD1YHR003C SPP1Q03012 353 aa6.34□□□□□ -1.39
TCD1YHR003C SAM3Q08986 587 aa6.34□□□□□ -1.39
TCD1YHR003C MSB4Q12317 492 aa6.34□□□□□ -1.39
TCD1YHR003C TIF11P38912 153 aaKnown RBP6.31□□□□□ -1.4
TCD1YHR003C YOL036WQ08206 761 aa6.31□□□□□ -1.4
TCD1YHR003C MIF2P35201 549 aa6.3□□□□□ -1.4
TCD1YHR003C COQ8P27697 501 aa6.29□□□□□ -1.4
TCD1YHR003C EAP1P36041 632 aaKnown RBP6.29□□□□□ -1.4
TCD1YHR003C SET4P42948 560 aa6.28□□□□□ -1.4
TCD1YHR003C ULI1P43604 169 aa6.27□□□□□ -1.41
TCD1YHR003C NOP53Q12080 455 aaKnown RBP6.27□□□□□ -1.41
TCD1YHR003C ABP1P15891 592 aaKnown RBP6.26□□□□□ -1.41
TCD1YHR003C EDS1P38073 919 aa6.26□□□□□ -1.41
TCD1YHR003C GYP5Q12344 894 aa6.26□□□□□ -1.41
TCD1YHR003C PTC3P34221 468 aaKnown RBP6.24□□□□□ -1.41
TCD1YHR003C SET1P38827 1080 aaKnown RBP6.23□□□□□ -1.41
TCD1YHR003C GRE2Q12068 342 aaKnown RBP6.23□□□□□ -1.41
TCD1YHR003C IOC2Q12072 812 aa6.23□□□□□ -1.41
TCD1YHR003C TRP5P00931 707 aaKnown RBP6.21□□□□□ -1.42
TCD1YHR003C DMA1P38823 416 aa6.21□□□□□ -1.42
TCD1YHR003C RQC2Q12532 1038 aaKnown RBP6.21□□□□□ -1.42
TCD1YHR003C HTA1P04911 132 aaKnown RBP6.2□□□□□ -1.42
TCD1YHR003C HTA2P04912 132 aa6.2□□□□□ -1.42
TCD1YHR003C GUT1P32190 709 aa6.2□□□□□ -1.42
TCD1YHR003C ATH1P48016 1211 aa6.2□□□□□ -1.42
TCD1YHR003C LDB19Q12502 818 aa6.2□□□□□ -1.42
TCD1YHR003C DCW1P36091 449 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms