RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W HOT1Q03213 719 aa3.61□□□□□ -1.83
PRP18YGR006W RKM1Q08961 583 aaPredicted RBP3.61□□□□□ -1.83
PRP18YGR006W CTF3Q12748 733 aa3.61□□□□□ -1.83
PRP18YGR006W HEM2P05373 342 aa3.6□□□□□ -1.83
PRP18YGR006W SEC63P14906 663 aa3.6□□□□□ -1.83
PRP18YGR006W CPR2P23285 205 aa3.6□□□□□ -1.83
PRP18YGR006W RHB1P25378 209 aa3.6□□□□□ -1.83
PRP18YGR006W BEM1P29366 551 aa3.6□□□□□ -1.83
PRP18YGR006W HIR2P32480 875 aa3.6□□□□□ -1.83
PRP18YGR006W GLC7P32598 312 aaKnown RBP3.6□□□□□ -1.83
PRP18YGR006W YCR041WP37265 110 aa3.6□□□□□ -1.83
PRP18YGR006W APE3P37302 537 aaKnown RBP3.6□□□□□ -1.83
PRP18YGR006W RFC3P38629 340 aa3.6□□□□□ -1.83
PRP18YGR006W SAS2P40963 338 aa3.6□□□□□ -1.83
PRP18YGR006W GCD10P41814 478 aa3.6□□□□□ -1.83
PRP18YGR006W TRS85P46944 698 aa3.6□□□□□ -1.83
PRP18YGR006W YJL132WP47014 750 aa3.6□□□□□ -1.83
PRP18YGR006W SSN8P47821 323 aa3.6□□□□□ -1.83
PRP18YGR006W YIP1P53039 248 aa3.6□□□□□ -1.83
PRP18YGR006W YIF1P53845 314 aaKnown RBP3.6□□□□□ -1.83
PRP18YGR006W PIR3Q03180 325 aa3.6□□□□□ -1.83
PRP18YGR006W YMR130WQ04223 302 aa3.6□□□□□ -1.83
PRP18YGR006W YLR345WQ06137 509 aa3.6□□□□□ -1.83
PRP18YGR006W MUM3Q08750 479 aa3.6□□□□□ -1.83
PRP18YGR006W YMR230W-AQ3E7B5 62 aa3.6□□□□□ -1.83
PRP18YGR006W PHO2P07269 559 aa3.59□□□□□ -1.83
PRP18YGR006W URA4P20051 364 aa3.59□□□□□ -1.83
PRP18YGR006W BRF1P29056 596 aa3.59□□□□□ -1.83
PRP18YGR006W IDP2P41939 412 aa3.59□□□□□ -1.83
PRP18YGR006W ZIM17P42844 174 aa3.59□□□□□ -1.83
PRP18YGR006W AVT4P50944 713 aa3.59□□□□□ -1.83
PRP18YGR006W POP6P53218 158 aa3.59□□□□□ -1.83
PRP18YGR006W ART5P53244 586 aaKnown RBP3.59□□□□□ -1.83
PRP18YGR006W ARK1P53974 638 aa3.59□□□□□ -1.83
PRP18YGR006W MRP51Q02950 344 aa3.59□□□□□ -1.83
PRP18YGR006W ACL4Q03771 387 aa3.59□□□□□ -1.83
PRP18YGR006W AIM32Q04689 311 aa3.59□□□□□ -1.83
PRP18YGR006W HIP1P06775 603 aa3.58□□□□□ -1.84
PRP18YGR006W MDH1P17505 334 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
PRP18YGR006W ERV1P27882 189 aa3.58□□□□□ -1.84
PRP18YGR006W AGA1P32323 725 aa3.58□□□□□ -1.84
PRP18YGR006W SLM4P38247 162 aa3.58□□□□□ -1.84
PRP18YGR006W RRT2P38332 387 aa3.58□□□□□ -1.84
PRP18YGR006W RRT5P43607 289 aa3.58□□□□□ -1.84
PRP18YGR006W TCB2P48231 1178 aa3.58□□□□□ -1.84
PRP18YGR006W RPT4P53549 437 aaKnown RBP3.58□□□□□ -1.84
PRP18YGR006W CIK1Q01649 594 aa3.58□□□□□ -1.84
PRP18YGR006W RTT103Q05543 409 aa3.58□□□□□ -1.84
PRP18YGR006W MDM30Q05930 598 aa3.58□□□□□ -1.84
PRP18YGR006W DCS1Q06151 350 aa3.58□□□□□ -1.84
PRP18YGR006W DIS3Q08162 1001 aaKnown RBP3.58□□□□□ -1.84
PRP18YGR006W REX4Q08237 289 aa3.58□□□□□ -1.84
PRP18YGR006W SGT1Q08446 395 aa3.58□□□□□ -1.84
PRP18YGR006W YPL199CQ08954 240 aa3.58□□□□□ -1.84
PRP18YGR006W SCEIP03882 235 aa3.57□□□□□ -1.84
PRP18YGR006W CLN1P20437 546 aa3.57□□□□□ -1.84
PRP18YGR006W GEX1P25596 615 aa3.57□□□□□ -1.84
PRP18YGR006W PEX5P35056 612 aa3.57□□□□□ -1.84
PRP18YGR006W LYS1P38998 373 aaRIP-Chip data3.57□□□□□ -1.84not detected
PRP18YGR006W CCT4P39078 528 aaKnown RBP3.57□□□□□ -1.84
PRP18YGR006W MSO1P53604 210 aaKnown RBP3.57□□□□□ -1.84
PRP18YGR006W IBD2P53892 351 aa3.57□□□□□ -1.84
PRP18YGR006W VPS9P54787 451 aa3.57□□□□□ -1.84
PRP18YGR006W MMR1Q06324 491 aa3.57□□□□□ -1.84
PRP18YGR006W ARG4P04076 463 aaPredicted RBP3.56□□□□□ -1.84
PRP18YGR006W CPR1P14832 162 aaKnown RBP3.56□□□□□ -1.84
PRP18YGR006W PRP16P15938 1071 aaPredicted RBP3.56□□□□□ -1.84
PRP18YGR006W RNA14P25298 677 aaKnown RBP3.56□□□□□ -1.84
PRP18YGR006W TIP1P27654 210 aaPredicted RBP3.56□□□□□ -1.84
PRP18YGR006W MRP4P32902 394 aa3.56□□□□□ -1.84
PRP18YGR006W MKT1P40850 830 aaKnown RBP3.56□□□□□ -1.84
PRP18YGR006W BUD27P43573 796 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
PRP18YGR006W TAF12Q03761 539 aa3.56□□□□□ -1.84
PRP18YGR006W YTH1Q06102 208 aaPredicted RBP3.56□□□□□ -1.84
PRP18YGR006W HNT3Q08702 217 aa3.56□□□□□ -1.84
PRP18YGR006W TIM18Q08749 192 aa3.56□□□□□ -1.84
PRP18YGR006W VPS54Q12071 889 aa3.56□□□□□ -1.84
PRP18YGR006W BUG1Q12191 341 aa3.56□□□□□ -1.84
PRP18YGR006W PKH2Q12236 1081 aaKnown RBP3.56□□□□□ -1.84
PRP18YGR006W PMR1P13586 950 aa3.55□□□□□ -1.84
PRP18YGR006W SPO7P18410 259 aa3.55□□□□□ -1.84
PRP18YGR006W SPS22P25380 463 aa3.55□□□□□ -1.84
PRP18YGR006W SOR1P35497 357 aaKnown RBP3.55□□□□□ -1.84
PRP18YGR006W NAT2P37293 288 aa3.55□□□□□ -1.84
PRP18YGR006W RRN10P38204 145 aa3.55□□□□□ -1.84
PRP18YGR006W PCA1P38360 1216 aa3.55□□□□□ -1.84
PRP18YGR006W MST28P39552 234 aa3.55□□□□□ -1.84
PRP18YGR006W HMS2P47175 358 aa3.55□□□□□ -1.84
PRP18YGR006W RSC1P53236 928 aa3.55□□□□□ -1.84
PRP18YGR006W YGR111WP53265 400 aa3.55□□□□□ -1.84
PRP18YGR006W YNR048WP53740 393 aa3.55□□□□□ -1.84
PRP18YGR006W FRE4P53746 719 aa3.55□□□□□ -1.84
PRP18YGR006W WSC2P53832 503 aa3.55□□□□□ -1.84
PRP18YGR006W SXM1Q04175 944 aaKnown RBP3.55□□□□□ -1.84
PRP18YGR006W SOR2Q07786 357 aa3.55□□□□□ -1.84
PRP18YGR006W AEP3Q12089 606 aa3.55□□□□□ -1.84
PRP18YGR006W YPR022CQ12139 1133 aa3.55□□□□□ -1.84
PRP18YGR006W MTR10Q99189 972 aa3.55□□□□□ -1.84
PRP18YGR006W SAM1P10659 382 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W HOM3P10869 527 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms