RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C CLB2P24869 491 aa3.74□□□□□ -1.81
FCF1YDR339C GAC1P28006 793 aa3.74□□□□□ -1.81
FCF1YDR339C SMI1P32566 505 aa3.74□□□□□ -1.81
FCF1YDR339C GYP6P32806 458 aa3.74□□□□□ -1.81
FCF1YDR339C REC114P32841 428 aa3.74□□□□□ -1.81
FCF1YDR339C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
FCF1YDR339C LAS1P36146 502 aaPredicted RBP3.74□□□□□ -1.81
FCF1YDR339C OLA1P38219 394 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C MMS4P38257 691 aa3.74□□□□□ -1.81
FCF1YDR339C CTM1P38818 585 aa3.74□□□□□ -1.81
FCF1YDR339C SAE2P46946 345 aa3.74□□□□□ -1.81
FCF1YDR339C ORC5P50874 479 aa3.74□□□□□ -1.81
FCF1YDR339C YGR126WP53274 230 aa3.74□□□□□ -1.81
FCF1YDR339C SCW4P53334 386 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C RPT4P53549 437 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C ADA2Q02336 434 aa3.74□□□□□ -1.81
FCF1YDR339C YMR130WQ04223 302 aa3.74□□□□□ -1.81
FCF1YDR339C ERV41Q04651 352 aa3.74□□□□□ -1.81
FCF1YDR339C HEL2Q05580 639 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C RBS1Q05672 457 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C CMS1Q07897 291 aaKnown RBP3.74□□□□□ -1.81
FCF1YDR339C SAC3P46674 1301 aa3.73□□□□□ -1.81
FCF1YDR339C YLR278CQ05854 1341 aa3.73□□□□□ -1.81
FCF1YDR339C CDC37P06101 506 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C PUT2P07275 575 aa3.73□□□□□ -1.81
FCF1YDR339C LPD1P09624 499 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C RPL1AP0CX43 217 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C RPL1BP0CX44 217 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C SPO7P18410 259 aa3.73□□□□□ -1.81
FCF1YDR339C PRP2P20095 876 aaPredicted RBP3.73□□□□□ -1.81
FCF1YDR339C MCM4P30665 933 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C DPH5P32469 300 aaPredicted RBP3.73□□□□□ -1.81
FCF1YDR339C LOS1P33418 1100 aaPredicted RBP3.73□□□□□ -1.81
FCF1YDR339C SHP1P34223 423 aa3.73□□□□□ -1.81
FCF1YDR339C OCT1P35999 772 aa3.73□□□□□ -1.81
FCF1YDR339C YKL023WP36103 277 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C YMR124WP39523 943 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C EFM4P40516 257 aa3.73□□□□□ -1.81
FCF1YDR339C CUE3P53137 624 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C RMD9P53140 646 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C TOF1P53840 1238 aa3.73□□□□□ -1.81
FCF1YDR339C ACL4Q03771 387 aa3.73□□□□□ -1.81
FCF1YDR339C ABP140Q08641 628 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C HER1Q12276 1246 aa3.73□□□□□ -1.81
FCF1YDR339C RDL1Q12305 139 aaKnown RBP3.73□□□□□ -1.81
FCF1YDR339C NBL1Q3E7Y6 73 aa3.73□□□□□ -1.81
FCF1YDR339C CBP1P07252 654 aa3.72□□□□□ -1.81
FCF1YDR339C GCD2P12754 651 aaPredicted RBP3.72□□□□□ -1.81
FCF1YDR339C URA4P20051 364 aa3.72□□□□□ -1.81
FCF1YDR339C CLN1P20437 546 aa3.72□□□□□ -1.81
FCF1YDR339C TKL1P23254 680 aaKnown RBP3.72□□□□□ -1.81
FCF1YDR339C PPH22P23595 377 aa3.72□□□□□ -1.81
FCF1YDR339C RPL5P26321 297 aaKnown RBP3.72□□□□□ -1.81
FCF1YDR339C BMH1P29311 267 aaKnown RBP3.72□□□□□ -1.81
FCF1YDR339C AFG1P32317 509 aa3.72□□□□□ -1.81
FCF1YDR339C SPP381P38282 291 aaPredicted RBP3.72□□□□□ -1.81
FCF1YDR339C LIN1P38852 340 aaPredicted RBP3.72□□□□□ -1.81
FCF1YDR339C SHQ1P40486 507 aaPredicted RBP3.72□□□□□ -1.81
FCF1YDR339C YIL001WP40560 513 aa3.72□□□□□ -1.81
FCF1YDR339C SNO3P43544 222 aa3.72□□□□□ -1.81
FCF1YDR339C ATG27P46989 271 aa3.72□□□□□ -1.81
FCF1YDR339C YJL132WP47014 750 aa3.72□□□□□ -1.81
FCF1YDR339C UBP8P50102 471 aa3.72□□□□□ -1.81
FCF1YDR339C RSM23Q01163 450 aa3.72□□□□□ -1.81
FCF1YDR339C YMR160WQ03823 816 aa3.72□□□□□ -1.81
FCF1YDR339C PPM1Q04081 328 aa3.72□□□□□ -1.81
FCF1YDR339C UBX2Q04228 584 aa3.72□□□□□ -1.81
FCF1YDR339C SPC24Q04477 213 aa3.72□□□□□ -1.81
FCF1YDR339C SWF1Q04629 336 aa3.72□□□□□ -1.81
FCF1YDR339C MMR1Q06324 491 aa3.72□□□□□ -1.81
FCF1YDR339C MCH4Q08268 501 aa3.72□□□□□ -1.81
FCF1YDR339C TFB5Q3E7C1 72 aaPredicted RBP3.72□□□□□ -1.81
FCF1YDR339C URE2P23202 354 aaKnown RBP3.71□□□□□ -1.82
FCF1YDR339C UBC6P33296 250 aaPredicted RBP3.71□□□□□ -1.82
FCF1YDR339C YET1P35723 206 aa3.71□□□□□ -1.82
FCF1YDR339C CBP4P37267 147 aa3.71□□□□□ -1.82
FCF1YDR339C IMD2P38697 523 aaKnown RBP3.71□□□□□ -1.82
FCF1YDR339C YHR210CP38893 341 aa3.71□□□□□ -1.82
FCF1YDR339C TIF4631P39935 952 aaKnown RBP3.71□□□□□ -1.82
FCF1YDR339C CDC1P40986 491 aa3.71□□□□□ -1.82
FCF1YDR339C EPL1P43572 832 aa3.71□□□□□ -1.82
FCF1YDR339C TOM22P49334 152 aa3.71□□□□□ -1.82
FCF1YDR339C YGL108CP53139 140 aa3.71□□□□□ -1.82
FCF1YDR339C PIB2P53191 635 aa3.71□□□□□ -1.82
FCF1YDR339C YPR003CP53394 754 aa3.71□□□□□ -1.82
FCF1YDR339C PDR8Q06149 701 aa3.71□□□□□ -1.82
FCF1YDR339C ATG26Q06321 1198 aa3.71□□□□□ -1.82
FCF1YDR339C UAF30Q08747 228 aa3.71□□□□□ -1.82
FCF1YDR339C TAF10Q12030 206 aa3.71□□□□□ -1.82
FCF1YDR339C RIO1Q12196 484 aaKnown RBP3.71□□□□□ -1.82
FCF1YDR339C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
FCF1YDR339C VAM3Q12241 283 aa3.71□□□□□ -1.82
FCF1YDR339C YDR061WQ12298 539 aa3.71□□□□□ -1.82
FCF1YDR339C MTR10Q99189 972 aa3.71□□□□□ -1.82
FCF1YDR339C COR1P07256 457 aa3.7□□□□□ -1.82
FCF1YDR339C CHO1P08456 276 aa3.7□□□□□ -1.82
FCF1YDR339C TAL1P15019 335 aaKnown RBP3.7□□□□□ -1.82
FCF1YDR339C RAD57P25301 460 aa3.7□□□□□ -1.82
FCF1YDR339C YCR006CP25350 157 aa3.7□□□□□ -1.82
FCF1YDR339C POT1P27796 417 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms