RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W CDC33P07260 213 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W YCR006CP25350 157 aa2.48□□□□□ -2.01
VPS41YDR080W SPS19P32573 292 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W ALY1P36117 915 aa2.48□□□□□ -2.01
VPS41YDR080W LRP1P38801 184 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W GPI16P38875 610 aa2.48□□□□□ -2.01
VPS41YDR080W SSP120P39931 234 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W YGL260WP53056 76 aa2.48□□□□□ -2.01
VPS41YDR080W ZRG17P53735 605 aa2.48□□□□□ -2.01
VPS41YDR080W ENT5Q03769 411 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W TPO3Q06451 622 aa2.48□□□□□ -2.01
VPS41YDR080W BI2P03873 423 aa2.48□□□□□ -2.01
VPS41YDR080W SSA3P09435 649 aaKnown RBP2.48□□□□□ -2.01
VPS41YDR080W NTR2P36118 322 aaPredicted RBP2.48□□□□□ -2.01
VPS41YDR080W EMP65P40085 556 aa2.48□□□□□ -2.01
VPS41YDR080W YER189WP40104 122 aa2.48□□□□□ -2.01
VPS41YDR080W SNO3P43544 222 aa2.48□□□□□ -2.01
VPS41YDR080W YFR020WP43600 232 aa2.48□□□□□ -2.01
VPS41YDR080W PLM2Q04383 521 aa2.48□□□□□ -2.01
VPS41YDR080W TRI1Q05024 226 aa2.48□□□□□ -2.01
VPS41YDR080W RSF1Q05043 376 aa2.48□□□□□ -2.01
VPS41YDR080W CRC1Q12289 327 aa2.48□□□□□ -2.01
VPS41YDR080W BI3Q9ZZW7 517 aa2.48□□□□□ -2.01
VPS41YDR080W SEC12P11655 471 aa2.47□□□□□ -2.01
VPS41YDR080W FUR1P18562 216 aaKnown RBP2.47□□□□□ -2.01
VPS41YDR080W URE2P23202 354 aaKnown RBP2.47□□□□□ -2.01
VPS41YDR080W YSR3P23501 404 aa2.47□□□□□ -2.01
VPS41YDR080W FTH1P38310 465 aa2.47□□□□□ -2.01
VPS41YDR080W YEL028WP39989 153 aa2.47□□□□□ -2.01
VPS41YDR080W YIL024CP40543 189 aa2.47□□□□□ -2.01
VPS41YDR080W BLS1Q06071 122 aa2.47□□□□□ -2.01
VPS41YDR080W LDB18Q07887 179 aa2.47□□□□□ -2.01
VPS41YDR080W CRT10Q08226 957 aa2.47□□□□□ -2.01
VPS41YDR080W PGC1Q08959 321 aa2.47□□□□□ -2.01
VPS41YDR080W LYS21Q12122 440 aaKnown RBP2.47□□□□□ -2.01
VPS41YDR080W EFG1Q3E705 233 aaKnown RBP2.47□□□□□ -2.01
VPS41YDR080W HSH49Q99181 213 aaPredicted RBP2.47□□□□□ -2.01
VPS41YDR080W DDP1Q99321 188 aaKnown RBP2.47□□□□□ -2.01
VPS41YDR080W SEM1O94742 89 aa2.47□□□□□ -2.01
VPS41YDR080W GRR1P24814 1151 aa2.47□□□□□ -2.01
VPS41YDR080W YCL042WP25572 119 aa2.47□□□□□ -2.01
VPS41YDR080W SIN4P32259 974 aa2.47□□□□□ -2.01
VPS41YDR080W SKN1P33336 771 aa2.47□□□□□ -2.01
VPS41YDR080W AIM18P38884 321 aa2.47□□□□□ -2.01
VPS41YDR080W CYC2P38909 366 aa2.47□□□□□ -2.01
VPS41YDR080W PAN6P40459 309 aa2.47□□□□□ -2.01
VPS41YDR080W ZIM17P42844 174 aa2.47□□□□□ -2.01
VPS41YDR080W RPC17P47076 161 aa2.47□□□□□ -2.01
VPS41YDR080W HOL1P53389 586 aa2.47□□□□□ -2.01
VPS41YDR080W YPR078CQ06813 372 aa2.47□□□□□ -2.01
VPS41YDR080W EMP46Q12396 444 aa2.47□□□□□ -2.01
VPS41YDR080W LAG2Q92325 660 aa2.47□□□□□ -2.01
VPS41YDR080W IZH4Q99393 312 aa2.47□□□□□ -2.01
VPS41YDR080W URA4P20051 364 aa2.46□□□□□ -2.01
VPS41YDR080W EPT1P22140 391 aa2.46□□□□□ -2.01
VPS41YDR080W MRC1P25588 1096 aa2.46□□□□□ -2.01
VPS41YDR080W SPC110P32380 944 aa2.46□□□□□ -2.01
VPS41YDR080W YIL086CP40503 102 aa2.46□□□□□ -2.01
VPS41YDR080W IRC7P43623 340 aa2.46□□□□□ -2.01
VPS41YDR080W PEX8P53248 589 aa2.46□□□□□ -2.01
VPS41YDR080W YNL040WP53960 456 aaPredicted RBP2.46□□□□□ -2.01
VPS41YDR080W BUD7Q08754 746 aa2.46□□□□□ -2.01
VPS41YDR080W PFA4Q12006 378 aa2.46□□□□□ -2.01
VPS41YDR080W COX1P00401 534 aa2.46□□□□□ -2.02
VPS41YDR080W IMG1P25626 169 aa2.46□□□□□ -2.02
VPS41YDR080W MMS21P38632 267 aa2.46□□□□□ -2.02
VPS41YDR080W VFA1P40080 203 aa2.46□□□□□ -2.02
VPS41YDR080W YIL054WP40524 105 aa2.46□□□□□ -2.02
VPS41YDR080W PRO2P54885 456 aaKnown RBP2.46□□□□□ -2.02
VPS41YDR080W VPS20Q04272 221 aa2.46□□□□□ -2.02
VPS41YDR080W SWC7Q06707 132 aa2.46□□□□□ -2.02
VPS41YDR080W AFI1Q99222 893 aa2.46□□□□□ -2.02
VPS41YDR080W PMS1P14242 873 aa2.46□□□□□ -2.02
VPS41YDR080W AEP1P32493 518 aa2.46□□□□□ -2.02
VPS41YDR080W ASK1P35734 292 aa2.46□□□□□ -2.02
VPS41YDR080W SOL2P37262 315 aa2.46□□□□□ -2.02
VPS41YDR080W YEL073CP39974 107 aa2.46□□□□□ -2.02
VPS41YDR080W COG1P53079 417 aa2.46□□□□□ -2.02
VPS41YDR080W ERG13P54839 491 aaKnown RBP2.46□□□□□ -2.02
VPS41YDR080W EMI1Q04406 187 aa2.46□□□□□ -2.02
VPS41YDR080W YDR222WQ04925 415 aa2.46□□□□□ -2.02
VPS41YDR080W GRS2Q06817 618 aa2.46□□□□□ -2.02
VPS41YDR080W ETT1Q08421 412 aaKnown RBP2.46□□□□□ -2.02
VPS41YDR080W HER1Q12276 1246 aa2.46□□□□□ -2.02
VPS41YDR080W CPA1P07258 411 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W YCR102CP25608 368 aa2.45□□□□□ -2.02
VPS41YDR080W SRB5P32585 307 aa2.45□□□□□ -2.02
VPS41YDR080W RAD5P32849 1169 aaPredicted RBP2.45□□□□□ -2.02
VPS41YDR080W STB6P36085 766 aa2.45□□□□□ -2.02
VPS41YDR080W DED81P38707 554 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W CTK3P46963 296 aaPredicted RBP2.45□□□□□ -2.02
VPS41YDR080W MAD3P47074 515 aa2.45□□□□□ -2.02
VPS41YDR080W YGR111WP53265 400 aa2.45□□□□□ -2.02
VPS41YDR080W SCW4P53334 386 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W ESF2P53743 316 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W YOL075CQ08234 1294 aa2.45□□□□□ -2.02
VPS41YDR080W AAD15Q08361 143 aa2.45□□□□□ -2.02
VPS41YDR080W SMF3Q12078 473 aaPredicted RBP2.45□□□□□ -2.02
VPS41YDR080W YOL107WQ12239 342 aa2.45□□□□□ -2.02
VPS41YDR080W OCA6Q12454 224 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms