RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C NDE1P40215 560 aa5.31□□□□□ -1.56
RFA1YAR007C PFD1P46988 109 aa5.31□□□□□ -1.56
RFA1YAR007C NRD1P53617 575 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RFA1YAR007C CDD1Q06549 142 aa5.31□□□□□ -1.56
RFA1YAR007C YDL121CQ07541 149 aa5.31□□□□□ -1.56
RFA1YAR007C SYC1Q08553 188 aaPredicted RBP5.31□□□□□ -1.56
RFA1YAR007C MLH3Q12083 715 aa5.31□□□□□ -1.56
RFA1YAR007C PNS1Q12412 539 aa5.31□□□□□ -1.56
RFA1YAR007C YHR213W-AQ8TGT4 77 aa5.31□□□□□ -1.56
RFA1YAR007C SIR3P06701 978 aa5.3□□□□□ -1.56
RFA1YAR007C RPS4AP0CX35 261 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C RPS4BP0CX36 261 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C RPB4P20433 221 aaPredicted RBP5.3□□□□□ -1.56
RFA1YAR007C LRE1P25579 583 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C SKT5P34226 696 aa5.3□□□□□ -1.56
RFA1YAR007C MRPL3P36516 390 aa5.3□□□□□ -1.56
RFA1YAR007C APT2P36973 181 aa5.3□□□□□ -1.56
RFA1YAR007C MRP21P38175 177 aa5.3□□□□□ -1.56
RFA1YAR007C REG2P38232 338 aa5.3□□□□□ -1.56
RFA1YAR007C SFB3P38810 929 aa5.3□□□□□ -1.56
RFA1YAR007C DOT6P40059 670 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C VRG4P40107 337 aa5.3□□□□□ -1.56
RFA1YAR007C HXT9P40885 567 aa5.3□□□□□ -1.56
RFA1YAR007C FKH2P41813 862 aa5.3□□□□□ -1.56
RFA1YAR007C SKP2P42843 763 aa5.3□□□□□ -1.56
RFA1YAR007C YFR018CP43599 363 aa5.3□□□□□ -1.56
RFA1YAR007C RPS10BP46784 105 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C APS3P47064 194 aa5.3□□□□□ -1.56
RFA1YAR007C ACF4P47129 309 aa5.3□□□□□ -1.56
RFA1YAR007C SSN8P47821 323 aa5.3□□□□□ -1.56
RFA1YAR007C BOL2P53082 120 aa5.3□□□□□ -1.56
RFA1YAR007C PRM8P53174 237 aa5.3□□□□□ -1.56
RFA1YAR007C NOP13P53883 403 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
RFA1YAR007C RPL6AQ02326 176 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C RLI1Q03195 608 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C YMD8Q03697 442 aa5.3□□□□□ -1.56
RFA1YAR007C EMI1Q04406 187 aa5.3□□□□□ -1.56
RFA1YAR007C PHO92Q06390 306 aa5.3□□□□□ -1.56
RFA1YAR007C ARO10Q06408 635 aa5.3□□□□□ -1.56
RFA1YAR007C THP1Q08231 455 aa5.3□□□□□ -1.56
RFA1YAR007C RPS10AQ08745 105 aaPredicted RBP5.3□□□□□ -1.56
RFA1YAR007C GPM2Q12008 311 aa5.3□□□□□ -1.56
RFA1YAR007C RAD52P06778 471 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C GUK1P15454 187 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C DAP2P18962 818 aa5.3□□□□□ -1.56
RFA1YAR007C AAT2P23542 418 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C CNB1P25296 175 aa5.3□□□□□ -1.56
RFA1YAR007C CAM1P29547 415 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C SSO1P32867 290 aa5.3□□□□□ -1.56
RFA1YAR007C MKS1P34072 584 aa5.3□□□□□ -1.56
RFA1YAR007C YKR051WP36142 418 aa5.3□□□□□ -1.56
RFA1YAR007C ATP3P38077 311 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C MCM7P38132 845 aa5.3□□□□□ -1.56
RFA1YAR007C STP2P38704 541 aa5.3□□□□□ -1.56
RFA1YAR007C RSP5P39940 809 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C HAT2P39984 401 aa5.3□□□□□ -1.56
RFA1YAR007C YER186CP40101 306 aa5.3□□□□□ -1.56
RFA1YAR007C MDV1P47025 714 aa5.3□□□□□ -1.56
RFA1YAR007C KTR6P54070 446 aa5.3□□□□□ -1.56
RFA1YAR007C MTD1Q02046 320 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C GOT1Q03554 138 aa5.3□□□□□ -1.56
RFA1YAR007C SKY1Q03656 742 aa5.3□□□□□ -1.56
RFA1YAR007C TIF35Q04067 274 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C DFG5Q05031 458 aa5.3□□□□□ -1.56
RFA1YAR007C DBP9Q06218 594 aaKnown RBP5.3□□□□□ -1.56
RFA1YAR007C UBX5Q06682 500 aa5.3□□□□□ -1.56
RFA1YAR007C YPL199CQ08954 240 aa5.3□□□□□ -1.56
RFA1YAR007C MAS1P10507 462 aa5.29□□□□□ -1.56
RFA1YAR007C BAR1P12630 587 aa5.29□□□□□ -1.56
RFA1YAR007C RAD27P26793 382 aa5.29□□□□□ -1.56
RFA1YAR007C YRO2P38079 344 aa5.29□□□□□ -1.56
RFA1YAR007C MBA1P38300 278 aa5.29□□□□□ -1.56
RFA1YAR007C YHR033WP38690 423 aa5.29□□□□□ -1.56
RFA1YAR007C AFG3P39925 761 aa5.29□□□□□ -1.56
RFA1YAR007C YEL028WP39989 153 aa5.29□□□□□ -1.56
RFA1YAR007C VAB2P40003 282 aa5.29□□□□□ -1.56
RFA1YAR007C SLX8P40072 274 aa5.29□□□□□ -1.56
RFA1YAR007C ESL1P40456 1118 aa5.29□□□□□ -1.56
RFA1YAR007C YJL218WP40892 196 aaKnown RBP5.29□□□□□ -1.56
RFA1YAR007C YJL049WP47048 450 aa5.29□□□□□ -1.56
RFA1YAR007C NAS6P50086 228 aa5.29□□□□□ -1.56
RFA1YAR007C MAL11P53048 616 aa5.29□□□□□ -1.56
RFA1YAR007C PEX31P53203 462 aa5.29□□□□□ -1.56
RFA1YAR007C TIM13P53299 105 aa5.29□□□□□ -1.56
RFA1YAR007C YNL181WP53878 407 aa5.29□□□□□ -1.56
RFA1YAR007C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
RFA1YAR007C NSE5Q03718 556 aa5.29□□□□□ -1.56
RFA1YAR007C RPN9Q04062 393 aaKnown RBP5.29□□□□□ -1.56
RFA1YAR007C SPO20Q04359 397 aa5.29□□□□□ -1.56
RFA1YAR007C BLS1Q06071 122 aa5.29□□□□□ -1.56
RFA1YAR007C YPR172WQ06608 200 aa5.29□□□□□ -1.56
RFA1YAR007C PMT7Q06644 662 aa5.29□□□□□ -1.56
RFA1YAR007C MFG1Q07684 458 aa5.29□□□□□ -1.56
RFA1YAR007C MCA1Q08601 432 aa5.29□□□□□ -1.56
RFA1YAR007C RRG7Q08774 242 aaPredicted RBP5.29□□□□□ -1.56
RFA1YAR007C MRH1Q12117 320 aaPredicted RBP5.29□□□□□ -1.56
RFA1YAR007C RMD5Q12508 421 aa5.29□□□□□ -1.56
RFA1YAR007C SUS1Q6WNK7 96 aa5.29□□□□□ -1.56
RFA1YAR007C YOR019WQ99248 730 aa5.29□□□□□ -1.56
RFA1YAR007C SLH1P53327 1967 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms