RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	PSY4	P38193	441 aa		3.92	□□□□□ -1.78
RET3	YPL010W	TRM7	P38238	310 aa	Known RBP	3.92	□□□□□ -1.78
RET3	YPL010W	YHR097C	P38809	366 aa	Known RBP	3.92	□□□□□ -1.78
RET3	YPL010W	GIM4	P40005	111 aa	Known RBP	3.92	□□□□□ -1.78
RET3	YPL010W	ZRG17	P53735	605 aa		3.92	□□□□□ -1.78
RET3	YPL010W	PEX25	Q02969	394 aa		3.92	□□□□□ -1.78
RET3	YPL010W	RCO1	Q04779	684 aa		3.92	□□□□□ -1.78
RET3	YPL010W	RRP45	Q05636	305 aa	Known RBP	3.92	□□□□□ -1.78
RET3	YPL010W	ENT2	Q05785	613 aa		3.92	□□□□□ -1.78
RET3	YPL010W	BLS1	Q06071	122 aa		3.92	□□□□□ -1.78
RET3	YPL010W	VTA1	Q06263	330 aa		3.92	□□□□□ -1.78
RET3	YPL010W	GRS2	Q06817	618 aa		3.92	□□□□□ -1.78
RET3	YPL010W	FMP45	Q07651	309 aa		3.92	□□□□□ -1.78
RET3	YPL010W	YLR001C	Q07895	862 aa		3.92	□□□□□ -1.78
RET3	YPL010W	TMS1	Q12116	473 aa		3.92	□□□□□ -1.78
RET3	YPL010W	LEU9	Q12166	604 aa	Known RBP	3.92	□□□□□ -1.78
RET3	YPL010W	YLL056C	Q12177	298 aa		3.92	□□□□□ -1.78
RET3	YPL010W	HOS1	Q12214	470 aa		3.92	□□□□□ -1.78
RET3	YPL010W	LAG2	Q92325	660 aa		3.92	□□□□□ -1.78
RET3	YPL010W	ADE5,7	P07244	802 aa	Known RBP	3.91	□□□□□ -1.78
RET3	YPL010W	HMG1	P12683	1054 aa		3.91	□□□□□ -1.78
RET3	YPL010W	SIN4	P32259	974 aa		3.91	□□□□□ -1.78
RET3	YPL010W	NDI1	P32340	513 aa		3.91	□□□□□ -1.78
RET3	YPL010W	IMP3	P32899	183 aa	Predicted RBP	3.91	□□□□□ -1.78
RET3	YPL010W	HIS2	P38635	335 aa		3.91	□□□□□ -1.78
RET3	YPL010W	BEM4	P39011	633 aa		3.91	□□□□□ -1.78
RET3	YPL010W	FLC2	P39719	783 aa		3.91	□□□□□ -1.78
RET3	YPL010W	YEL073C	P39974	107 aa		3.91	□□□□□ -1.78
RET3	YPL010W	YAT2	P40017	923 aa		3.91	□□□□□ -1.78
RET3	YPL010W	LSM5	P40089	93 aa	Known RBP	3.91	□□□□□ -1.78
RET3	YPL010W	LRO1	P40345	661 aa		3.91	□□□□□ -1.78
RET3	YPL010W	IME4	P41833	600 aa		3.91	□□□□□ -1.78
RET3	YPL010W	TES1	P41903	349 aa	Known RBP	3.91	□□□□□ -1.78
RET3	YPL010W	BIT61	P47041	543 aa		3.91	□□□□□ -1.78
RET3	YPL010W	UBX6	P47049	396 aa		3.91	□□□□□ -1.78
RET3	YPL010W	NNF2	P53253	936 aa		3.91	□□□□□ -1.78
RET3	YPL010W	ARE2	P53629	642 aa	Known RBP	3.91	□□□□□ -1.78
RET3	YPL010W	NOP15	P53927	220 aa	Predicted RBP	3.91	□□□□□ -1.78
RET3	YPL010W	PRO2	P54885	456 aa	Known RBP	3.91	□□□□□ -1.78
RET3	YPL010W	HFD1	Q04458	532 aa		3.91	□□□□□ -1.78
RET3	YPL010W	ARP9	Q05123	467 aa		3.91	□□□□□ -1.78
RET3	YPL010W	RKI1	Q12189	258 aa		3.91	□□□□□ -1.78
RET3	YPL010W	YOR012W	Q12351	137 aa		3.91	□□□□□ -1.78
RET3	YPL010W	HSH49	Q99181	213 aa	Predicted RBP	3.91	□□□□□ -1.78
RET3	YPL010W	ERG20	P08524	352 aa	Known RBP	3.9	□□□□□ -1.79
RET3	YPL010W	HOM3	P10869	527 aa		3.9	□□□□□ -1.79
RET3	YPL010W	URA4	P20051	364 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YCR006C	P25350	157 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YMC1	P32331	307 aa		3.9	□□□□□ -1.79
RET3	YPL010W	HEM12	P32347	362 aa	Predicted RBP	3.9	□□□□□ -1.79
RET3	YPL010W	PET127	P32606	800 aa		3.9	□□□□□ -1.79
RET3	YPL010W	CNS1	P33313	385 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YBL055C	P34220	418 aa	Predicted RBP	3.9	□□□□□ -1.79
RET3	YPL010W	MRPL15	P36523	253 aa		3.9	□□□□□ -1.79
RET3	YPL010W	LDB7	P38210	180 aa		3.9	□□□□□ -1.79
RET3	YPL010W	RRT2	P38332	387 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YHR045W	P38775	560 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YHR182W	P38870	785 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YMR124W	P39523	943 aa	Known RBP	3.9	□□□□□ -1.79
RET3	YPL010W	IKS1	P47042	667 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YML6	P51998	286 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YGL260W	P53056	76 aa		3.9	□□□□□ -1.79
RET3	YPL010W	YPR003C	P53394	754 aa		3.9	□□□□□ -1.79
RET3	YPL010W	SNF12	P53628	566 aa		3.9	□□□□□ -1.79
RET3	YPL010W	CPR6	P53691	371 aa	Known RBP	3.9	□□□□□ -1.79
RET3	YPL010W	ESF2	P53743	316 aa	Known RBP	3.9	□□□□□ -1.79
RET3	YPL010W	FRE4	P53746	719 aa		3.9	□□□□□ -1.79
RET3	YPL010W	NUP100	Q02629	959 aa		3.9	□□□□□ -1.79
RET3	YPL010W	NEW1	Q08972	1196 aa	Known RBP	3.9	□□□□□ -1.79
RET3	YPL010W	RPL7A	P05737	244 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	TPK2	P06245	380 aa		3.89	□□□□□ -1.79
RET3	YPL010W	STE12	P13574	688 aa		3.89	□□□□□ -1.79
RET3	YPL010W	SPO12	P17123	173 aa		3.89	□□□□□ -1.79
RET3	YPL010W	YSR3	P23501	404 aa		3.89	□□□□□ -1.79
RET3	YPL010W	RPN12	P32496	274 aa		3.89	□□□□□ -1.79
RET3	YPL010W	SFC1	P33303	322 aa		3.89	□□□□□ -1.79
RET3	YPL010W	SKT5	P34226	696 aa		3.89	□□□□□ -1.79
RET3	YPL010W	MPE1	P35728	441 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	RPF2	P36160	344 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	COS111	P38308	924 aa		3.89	□□□□□ -1.79
RET3	YPL010W	CKB2	P38930	258 aa		3.89	□□□□□ -1.79
RET3	YPL010W	DHH1	P39517	506 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	ALG8	P40351	577 aa		3.89	□□□□□ -1.79
RET3	YPL010W	SEC24	P40482	926 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	YIL077C	P40508	320 aa		3.89	□□□□□ -1.79
RET3	YPL010W	PXA1	P41909	870 aa		3.89	□□□□□ -1.79
RET3	YPL010W	ELP2	P42935	788 aa		3.89	□□□□□ -1.79
RET3	YPL010W	HLJ1	P48353	224 aa		3.89	□□□□□ -1.79
RET3	YPL010W	TRM9	P49957	279 aa		3.89	□□□□□ -1.79
RET3	YPL010W	VPS75	P53853	264 aa		3.89	□□□□□ -1.79
RET3	YPL010W	NGL2	Q03264	515 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	YDR179W-A	Q03983	463 aa		3.89	□□□□□ -1.79
RET3	YPL010W	VPS36	Q06696	566 aa		3.89	□□□□□ -1.79
RET3	YPL010W	IZH3	Q07959	543 aa		3.89	□□□□□ -1.79
RET3	YPL010W	PFA4	Q12006	378 aa		3.89	□□□□□ -1.79
RET3	YPL010W	ULA1	Q12059	462 aa		3.89	□□□□□ -1.79
RET3	YPL010W	YDR018C	Q12185	396 aa		3.89	□□□□□ -1.79
RET3	YPL010W	RPL7B	Q12213	244 aa	Known RBP	3.89	□□□□□ -1.79
RET3	YPL010W	LDB17	Q12342	491 aa		3.89	□□□□□ -1.79
RET3	YPL010W	FRS1	P15624	595 aa	Known RBP	3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms