RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	VPS75	P53853	264 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	EOS1	P53938	366 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	GYL1	Q04322	720 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	TFC6	Q06339	672 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	CTI6	Q08923	506 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	PGA3	Q12746	312 aa	Known RBP	2.19	□□□□□ -2.06
RUD3	YOR216C	SAC3	P46674	1301 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	HIP1	P06775	603 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	CHS1	P08004	1131 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	PEP5	P12868	1029 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	PCL1	P24867	279 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	HCS1	P34243	683 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	KTR3	P38130	404 aa	Predicted RBP	2.18	□□□□□ -2.06
RUD3	YOR216C	REG2	P38232	338 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	PCL7	P40186	285 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	SPO22	P40511	975 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	SEC27	P41811	889 aa	Known RBP	2.18	□□□□□ -2.06
RUD3	YOR216C	MRX6	P48564	524 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	DUG3	P53871	357 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	HAL1	Q01766	294 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	IRC15	Q02733	499 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	PRP42	Q03776	544 aa	Known RBP	2.18	□□□□□ -2.06
RUD3	YOR216C	ERB1	Q04660	807 aa	Known RBP	2.18	□□□□□ -2.06
RUD3	YOR216C	VPS74	Q06385	345 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	ESA1	Q08649	445 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	SGT2	Q12118	346 aa	Known RBP	2.18	□□□□□ -2.06
RUD3	YOR216C	CEX1	Q12453	761 aa		2.18	□□□□□ -2.06
RUD3	YOR216C	CBS1	P14066	229 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
RUD3	YOR216C	CLB1	P24868	471 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	MRP20	P32387	263 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	SSE1	P32589	693 aa	Known RBP	2.17	□□□□□ -2.06
RUD3	YOR216C	UBP11	P36026	717 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	STB6	P36085	766 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	RRF1	P38771	230 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	FLC2	P39719	783 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	RTT105	P40063	208 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
RUD3	YOR216C	MDE1	P47095	244 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	VPS4	P52917	437 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	DSD1	P53095	428 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	YGR250C	P53316	781 aa	Known RBP	2.17	□□□□□ -2.06
RUD3	YOR216C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
RUD3	YOR216C	YSA1	Q01976	231 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	SHR3	Q02774	210 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	INA17	Q02888	182 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	RCO1	Q04779	684 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
RUD3	YOR216C	TEN1	Q07921	160 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	REX3	Q12090	404 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	NFI1	Q12216	726 aa		2.17	□□□□□ -2.06
RUD3	YOR216C	RPL19A	P0CX82	189 aa	Known RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	RPL19B	P0CX83	189 aa	Predicted RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	GRR1	P24814	1151 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	CPR4	P25334	318 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	YCR007C	P25354	239 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	SPB1	P25582	841 aa	Predicted RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	MSP1	P28737	362 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	TFB1	P32776	642 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	MID2	P36027	376 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	UIP5	P36137	443 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	OTU2	P38747	307 aa	Known RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	YFL067W	P43537	175 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	SIP4	P46954	829 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	RPS7B	P48164	190 aa	Known RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	PIL1	P53252	339 aa	Known RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	YPL107W	Q02873	248 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	YDR131C	Q03899	556 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	RAD30	Q04049	632 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	LUC7	Q07508	261 aa	Predicted RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	RIM20	Q12033	661 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	NUS1	Q12063	375 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	LEU9	Q12166	604 aa	Known RBP	2.16	□□□□□ -2.06
RUD3	YOR216C	FRE6	Q12473	712 aa		2.16	□□□□□ -2.06
RUD3	YOR216C	RPB2	P08518	1224 aa	Known RBP	2.15	□□□□□ -2.06
RUD3	YOR216C	DAL80	P26343	269 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	ADK2	P26364	225 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	PAP1	P29468	568 aa	Known RBP	2.15	□□□□□ -2.06
RUD3	YOR216C	IME2	P32581	645 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	RIB7	P33312	244 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	SPT8	P38915	602 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	AFG3	P39925	761 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	ZIM17	P42844	174 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	GWT1	P47026	490 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	YGR066C	P53242	292 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	OAZ1	Q02803	292 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	DPB4	Q04603	196 aa	Known RBP	2.15	□□□□□ -2.06
RUD3	YOR216C	YLR345W	Q06137	509 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	SKG3	Q06315	1026 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	YLH47	Q06493	454 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	NMD4	Q12129	218 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	SEC39	Q12745	709 aa		2.15	□□□□□ -2.06
RUD3	YOR216C	CHD1	P32657	1468 aa		2.14	□□□□□ -2.07
RUD3	YOR216C	YCK1	P23291	538 aa		2.14	□□□□□ -2.07
RUD3	YOR216C	PHO84	P25297	587 aa	Known RBP	2.14	□□□□□ -2.07
RUD3	YOR216C	BUD5	P25300	642 aa	Predicted RBP	2.14	□□□□□ -2.07
RUD3	YOR216C	LAS1	P36146	502 aa	Predicted RBP	2.14	□□□□□ -2.07
RUD3	YOR216C	PIM1	P36775	1133 aa		2.14	□□□□□ -2.07
RUD3	YOR216C	YHR054C	P38780	354 aa		2.14	□□□□□ -2.07
RUD3	YOR216C	SMF1	P38925	575 aa		2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms