RNA–Protein interactions for RNA: YOR198C

BFR1, Transcript of Component of mRNP complexes associated with polyribosomes, yeast

Gene BFR1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR1	YOR198C	ECM27	P47144	725 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	TOM22	P49334	152 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	RMD9	P53140	646 aa	Known RBP	2.64	□□□□□ -1.99
BFR1	YOR198C	YGR016W	P53209	190 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	YGR111W	P53265	400 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	YNL234W	P53857	426 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	YNL181W	P53878	407 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	PEX25	Q02969	394 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	HEL2	Q05580	639 aa	Known RBP	2.64	□□□□□ -1.99
BFR1	YOR198C	UAF30	Q08747	228 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	VAM3	Q12241	283 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	ARP6	Q12509	438 aa		2.64	□□□□□ -1.99
BFR1	YOR198C	SEC63	P14906	663 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	URA4	P20051	364 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	CLN1	P20437	546 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	KRE2	P27809	442 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	MCM4	P30665	933 aa	Known RBP	2.63	□□□□□ -1.99
BFR1	YOR198C	HIR2	P32480	875 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	UTR4	P32626	227 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	GYP6	P32806	458 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	HEL1	P36113	551 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	VHC1	P38329	1120 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	ERG7	P38604	731 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	RFC3	P38629	340 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	CAJ1	P39101	391 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	CUL3	P53202	744 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	SMA1	Q02651	245 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	YMR130W	Q04223	302 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	YMR254C	Q04838	102 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	RSF1	Q05043	376 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	MDM30	Q05930	598 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
BFR1	YOR198C	THI20	Q08224	551 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	RKM1	Q08961	583 aa	Predicted RBP	2.63	□□□□□ -1.99
BFR1	YOR198C	KEL3	Q08979	651 aa	Predicted RBP	2.63	□□□□□ -1.99
BFR1	YOR198C	BSC1	Q12140	328 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	TIP41	Q12199	356 aa		2.63	□□□□□ -1.99
BFR1	YOR198C	RPN5	Q12250	445 aa	Known RBP	2.63	□□□□□ -1.99
BFR1	YOR198C	MES1	P00958	751 aa	Known RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	CDC23	P16522	626 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	TPM1	P17536	199 aa	Known RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	GLK1	P17709	500 aa	Known RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	SPO7	P18410	259 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	YCR007C	P25354	239 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	FUN19	P28003	413 aa	Predicted RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	BRF1	P29056	596 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	SIN4	P32259	974 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	PRP21	P32524	280 aa	Predicted RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	YHR054C	P38780	354 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	CCT2	P39076	527 aa	Known RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	YER130C	P39959	443 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	GUF1	P46943	645 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	CRZ1	P53968	678 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	SLD5	Q03406	294 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	MSS11	Q03825	758 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	PHO92	Q06390	306 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	DCI1	Q08558	271 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	VPS54	Q12071	889 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	CFT2	Q12102	859 aa	Predicted RBP	2.62	□□□□□ -1.99
BFR1	YOR198C	MED2	Q12124	431 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	HSP42	Q12329	375 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	SKS1	Q12505	502 aa		2.62	□□□□□ -1.99
BFR1	YOR198C	LPD1	P09624	499 aa	Known RBP	2.61	□□□□□ -1.99
BFR1	YOR198C	RPL1A	P0CX43	217 aa	Known RBP	2.61	□□□□□ -1.99
BFR1	YOR198C	RPL1B	P0CX44	217 aa	Known RBP	2.61	□□□□□ -1.99
BFR1	YOR198C	HNM1	P19807	563 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	MGR1	P25573	417 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	ACH1	P32316	526 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	ECM15	P35195	104 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	DHH1	P39517	506 aa	Known RBP	2.61	□□□□□ -1.99
BFR1	YOR198C	FAU1	P40099	211 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	CSM2	P40465	213 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	POP1	P41812	875 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	RIP-Chip
BFR1	YOR198C	RPS0B	P46654	252 aa	Known RBP	2.61	□□□□□ -1.99
BFR1	YOR198C	YJL132W	P47014	750 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	GPI1	P53306	609 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	SAM50	P53969	484 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	IVY1	Q04934	453 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	GLO2	Q05584	274 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	BNA5	Q05979	453 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	DCS1	Q06151	350 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	SPT7	P35177	1332 aa		2.61	□□□□□ -1.99
BFR1	YOR198C	ARO3	P14843	370 aa	Known RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	AMD1	P15274	810 aa	Known RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	SRV2	P17555	526 aa	Known RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	BEM1	P29366	551 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	ANP1	P32629	500 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	RAD24	P32641	659 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	VPS17	P32913	551 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	MMS4	P38257	691 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	OSH3	P38713	996 aa	Known RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	YTA12	P40341	825 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	VHS2	P40463	436 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	NCS2	P53923	493 aa	Predicted RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	YMR087W	Q04299	284 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	YLR456W	Q06199	204 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	DIS3	Q08162	1001 aa	Known RBP	2.6	□□□□□ -1.99
BFR1	YOR198C	AEP3	Q12089	606 aa		2.6	□□□□□ -1.99
BFR1	YOR198C	RKM5	Q12367	367 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms