RNA–Protein interactions for RNA: YGR207C

CIR1, Transcript of Mitochondrial protein that interacts with frataxin (Yfh1p), yeast

Gene CIR1, Length 786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIR1	YGR207C	SEC1	P30619	724 aa	Known RBP	4.28	□□□□□ -1.72
CIR1	YGR207C	FMP46	P36141	133 aa	Known RBP	4.28	□□□□□ -1.72
CIR1	YGR207C	ISC1	P40015	477 aa	Known RBP	4.28	□□□□□ -1.72
CIR1	YGR207C	DRN1	P53255	507 aa	Known RBP	4.28	□□□□□ -1.72
CIR1	YGR207C	RPM2	Q02773	1202 aa		4.28	□□□□□ -1.72
CIR1	YGR207C	PNG1	Q02890	363 aa		4.28	□□□□□ -1.72
CIR1	YGR207C	ERP1	Q05359	219 aa	Known RBP	4.28	□□□□□ -1.72
CIR1	YGR207C	DON1	Q05610	365 aa		4.28	□□□□□ -1.72
CIR1	YGR207C	REX4	Q08237	289 aa		4.28	□□□□□ -1.72
CIR1	YGR207C	YLR278C	Q05854	1341 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	HIS4	P00815	799 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	RPI1	P23250	407 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	SGV1	P23293	657 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	BUB3	P26449	341 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	SPC110	P32380	944 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	APE2	P32454	952 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	YME2	P32843	850 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	NIP100	P33420	868 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	APE3	P37302	537 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	SRP72	P38688	640 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	YHR054C	P38780	354 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	RPH1	P39956	796 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	YJL213W	P40896	331 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	YJL132W	P47014	750 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	ECM27	P47144	725 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	CAF40	P53829	373 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	RPA49	Q01080	415 aa	Predicted RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	HSP31	Q04432	237 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
CIR1	YGR207C	NDD1	Q08887	554 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	KEL3	Q08979	651 aa	Predicted RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	PGA3	Q12746	312 aa	Known RBP	4.27	□□□□□ -1.73
CIR1	YGR207C	YOL159C-A	Q3E769	90 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	AFI1	Q99222	893 aa		4.27	□□□□□ -1.73
CIR1	YGR207C	LPD1	P09624	499 aa	Known RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	YIM1	P28625	365 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	NDI1	P32340	513 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	PMU1	P36069	295 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	STB6	P36085	766 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	MTC4	P38335	694 aa	Known RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	LSM5	P40089	93 aa	Known RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	TFG2	P41896	400 aa	Predicted RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	COS5	P47187	383 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	SKO1	Q02100	647 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	SXM1	Q04175	944 aa	Known RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	HCR1	Q05775	265 aa	Known RBP	4.26	□□□□□ -1.73
CIR1	YGR207C	COS7	Q07788	383 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	SIL1	Q08199	421 aa		4.26	□□□□□ -1.73
CIR1	YGR207C	RPL15A	P05748	204 aa	Known RBP	4.25	□□□□□ -1.73
CIR1	YGR207C	RPC53	P25441	422 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	YUR1	P26725	428 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	THI2	P38141	450 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	YFL067W	P43537	175 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	YFR016C	P43597	1233 aa	Known RBP	4.25	□□□□□ -1.73
CIR1	YGR207C	HOT1	Q03213	719 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	TAP42	Q04372	366 aa		4.25	□□□□□ -1.73
CIR1	YGR207C	RML2	P32611	393 aa		4.24	□□□□□ -1.73
CIR1	YGR207C	DHH1	P39517	506 aa	Known RBP	4.24	□□□□□ -1.73
CIR1	YGR207C	CAK1	P43568	368 aa	Predicted RBP	4.24	□□□□□ -1.73
CIR1	YGR207C	YDR387C	Q04162	555 aa		4.24	□□□□□ -1.73
CIR1	YGR207C	ERB1	Q04660	807 aa	Known RBP	4.24	□□□□□ -1.73
CIR1	YGR207C	ROY1	Q04847	553 aa		4.24	□□□□□ -1.73
CIR1	YGR207C	VAM3	Q12241	283 aa		4.24	□□□□□ -1.73
CIR1	YGR207C	SMC6	Q12749	1114 aa		4.24	□□□□□ -1.73
CIR1	YGR207C	GDH1	P07262	454 aa	Known RBP	4.23	□□□□□ -1.73
CIR1	YGR207C	MRS3	P10566	314 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	CLB1	P24868	471 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	PUT3	P25502	979 aa	Predicted RBP	4.23	□□□□□ -1.73
CIR1	YGR207C	YCR100C	P25606	316 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	BRF1	P29056	596 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	RPS0B	P46654	252 aa	Known RBP	4.23	□□□□□ -1.73
CIR1	YGR207C	POP6	P53218	158 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	PCP1	P53259	346 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	YIF1	P53845	314 aa	Known RBP	4.23	□□□□□ -1.73
CIR1	YGR207C	MRP51	Q02950	344 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	ODC1	Q03028	310 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	PIR3	Q03180	325 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	YMR130W	Q04223	302 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	DIS3	Q08162	1001 aa	Known RBP	4.23	□□□□□ -1.73
CIR1	YGR207C	SGT1	Q08446	395 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	YPL199C	Q08954	240 aa		4.23	□□□□□ -1.73
CIR1	YGR207C	RIP1	P08067	215 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	CPR1	P14832	162 aa	Known RBP	4.22	□□□□□ -1.73
CIR1	YGR207C	SPO7	P18410	259 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	URA4	P20051	364 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	ADK2	P26364	225 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	BEM1	P29366	551 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	PRP21	P32524	280 aa	Predicted RBP	4.22	□□□□□ -1.73
CIR1	YGR207C	PIM1	P36775	1133 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	RPR2	P40571	144 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	YDL186W	P48568	277 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	YIP1	P53039	248 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	ART5	P53244	586 aa	Known RBP	4.22	□□□□□ -1.73
CIR1	YGR207C	IBD2	P53892	351 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	GIP3	Q03016	1276 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	VPS54	Q12071	889 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	AYT1	Q12226	474 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	RKM5	Q12367	367 aa		4.22	□□□□□ -1.73
CIR1	YGR207C	ARG4	P04076	463 aa	Predicted RBP	4.21	□□□□□ -1.74
CIR1	YGR207C	HOM3	P10869	527 aa		4.21	□□□□□ -1.74

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