RNA–Protein interactions for RNA: YPL154C

PEP4, Transcript of Vacuolar aspartyl protease (proteinase A), yeast

Gene PEP4, Length 1,218 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP4	YPL154C	NIP1	P32497	812 aa	Known RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	IMP3	P32899	183 aa	Predicted RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	PPZ2	P33329	710 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	FMP46	P36141	133 aa	Known RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	JNM1	P36224	373 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	PSY4	P38193	441 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	LDB7	P38210	180 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	DIA4	P38705	446 aa	Predicted RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	YHR182W	P38870	785 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	GPI16	P38875	610 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	YHR210C	P38893	341 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	SMC2	P38989	1170 aa	Known RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	BEM4	P39011	633 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	YAT2	P40017	923 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	ARG2	P40360	574 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	TAH11	P47112	604 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	VPS73	P53142	486 aa	Known RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	EFM6	P53970	246 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	NUP100	Q02629	959 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	RLI1	Q03195	608 aa	Known RBP	4.38	□□□□□ -1.71
PEP4	YPL154C	ARP9	Q05123	467 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	REH1	Q06709	432 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	YOL107W	Q12239	342 aa		4.38	□□□□□ -1.71
PEP4	YPL154C	COX1	P00401	534 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	GAL7	P08431	366 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	CDC26	P14724	124 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	MSP1	P28737	362 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	DBF4	P32325	704 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	ORC2	P32833	620 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	PRP18	P33411	251 aa	Predicted RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	STB6	P36085	766 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	RPF2	P36160	344 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	GND1	P38720	489 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	GIM4	P40005	111 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	UBP6	P43593	499 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	YJL049W	P47048	450 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	SGF73	P53165	657 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	YGR021W	P53212	290 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	YPR003C	P53394	754 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	PRO2	P54885	456 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	MDM30	Q05930	598 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	RAX1	Q08760	435 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	LSP1	Q12230	341 aa	Known RBP	4.37	□□□□□ -1.71
PEP4	YPL154C	YOR012W	Q12351	137 aa		4.37	□□□□□ -1.71
PEP4	YPL154C	SSA3	P09435	649 aa	Known RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	KAR1	P11927	433 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	LAT1	P12695	482 aa	Known RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	PCT1	P13259	424 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	SLY1	P22213	666 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	BUB3	P26449	341 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	HEM12	P32347	362 aa	Predicted RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	PET127	P32606	800 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	BLI1	P35727	113 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	UBA4	P38820	440 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	DSS1	P39112	969 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	FLC2	P39719	783 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	SPC72	P39723	622 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	LSM5	P40089	93 aa	Known RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	YET2	Q04210	160 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	TRM12	Q04235	462 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	ASM4	Q05166	528 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	YLR287C	Q05881	355 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	RSC3	Q06639	885 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	YDL218W	Q07629	317 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	TEN1	Q07921	160 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	YLL056C	Q12177	298 aa		4.36	□□□□□ -1.71
PEP4	YPL154C	YOR097C	Q12274	175 aa	Predicted RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	PNO1	Q99216	274 aa	Known RBP	4.36	□□□□□ -1.71
PEP4	YPL154C	DYN1	P36022	4092 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	PMS1	P14242	873 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	CDC43	P18898	376 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	GRR1	P24814	1151 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	MRPL9	P31334	269 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	MKK1	P32490	508 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	HIS7	P33734	552 aa	Known RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	YSW1	P38280	609 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	MMS21	P38632	267 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	YHR045W	P38775	560 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	RIX1	P38883	763 aa	Predicted RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	HOS4	P40480	1083 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	SNM1	P40993	198 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	TRM9	P49957	279 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	PAN2	P53010	1115 aa	Predicted RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	YGR250C	P53316	781 aa	Known RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	NOP15	P53927	220 aa	Predicted RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	ECM9	Q02202	377 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	UME1	Q03010	460 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	MTQ2	Q03920	221 aa	Predicted RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	CTK1	Q03957	528 aa	Known RBP	4.35	□□□□□ -1.71
PEP4	YPL154C	VTA1	Q06263	330 aa		4.35	□□□□□ -1.71
PEP4	YPL154C	HSP60	P19882	572 aa	Known RBP	4.34	□□□□□ -1.71
PEP4	YPL154C	YCR102C	P25608	368 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	BUD14	P27637	709 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	SEC65	P29478	273 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	SRB5	P32585	307 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	SFC1	P33303	322 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	SKT5	P34226	696 aa		4.34	□□□□□ -1.71
PEP4	YPL154C	YPT52	P36018	234 aa	Known RBP	4.34	□□□□□ -1.71
PEP4	YPL154C	MAK5	P38112	773 aa	Predicted RBP	4.34	□□□□□ -1.71
PEP4	YPL154C	HIS2	P38635	335 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms