RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W CBS1P14066 229 aa3.49□□□□□ -1.85
VPS17YOR132W KAR3P17119 729 aa3.49□□□□□ -1.85
VPS17YOR132W APE3P37302 537 aaKnown RBP3.49□□□□□ -1.85
VPS17YOR132W EFM4P40516 257 aa3.49□□□□□ -1.85
VPS17YOR132W ZIM17P42844 174 aa3.49□□□□□ -1.85
VPS17YOR132W ARP5P53946 755 aa3.49□□□□□ -1.85
VPS17YOR132W REG1Q00816 1014 aa3.49□□□□□ -1.85
VPS17YOR132W NUP53Q03790 475 aa3.49□□□□□ -1.85
VPS17YOR132W CAC2Q04199 468 aa3.49□□□□□ -1.85
VPS17YOR132W DPB4Q04603 196 aaKnown RBP3.49□□□□□ -1.85
VPS17YOR132W POS5Q06892 414 aa3.49□□□□□ -1.85
VPS17YOR132W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
VPS17YOR132W DSE3Q08729 430 aa3.49□□□□□ -1.85
VPS17YOR132W RCN2Q12044 265 aa3.49□□□□□ -1.85
VPS17YOR132W YER145C-AA0A023PYF4 145 aa3.48□□□□□ -1.85
VPS17YOR132W MATALPHA2P0CY08 210 aa3.48□□□□□ -1.85
VPS17YOR132W HMLALPHA2P0CY09 210 aa3.48□□□□□ -1.85
VPS17YOR132W PWP1P21304 576 aaKnown RBP3.48□□□□□ -1.85
VPS17YOR132W NTR2P36118 322 aaPredicted RBP3.48□□□□□ -1.85
VPS17YOR132W SIF2P38262 535 aa3.48□□□□□ -1.85
VPS17YOR132W SMF1P38925 575 aa3.48□□□□□ -1.85
VPS17YOR132W SEC31P38968 1273 aaKnown RBP3.48□□□□□ -1.85
VPS17YOR132W YER130CP39959 443 aa3.48□□□□□ -1.85
VPS17YOR132W YMR147WP40218 223 aaKnown RBP3.48□□□□□ -1.85
VPS17YOR132W MET18P40469 1032 aa3.48□□□□□ -1.85
VPS17YOR132W NAS2P40555 220 aa3.48□□□□□ -1.85
VPS17YOR132W YGL082WP53155 381 aa3.48□□□□□ -1.85
VPS17YOR132W OGG1P53397 376 aaPredicted RBP3.48□□□□□ -1.85
VPS17YOR132W TOF1P53840 1238 aa3.48□□□□□ -1.85
VPS17YOR132W JJJ1P53863 590 aa3.48□□□□□ -1.85
VPS17YOR132W PFA5Q03289 374 aa3.48□□□□□ -1.85
VPS17YOR132W RCO1Q04779 684 aa3.48□□□□□ -1.85
VPS17YOR132W BUD7Q08754 746 aa3.48□□□□□ -1.85
VPS17YOR132W SKS1Q12505 502 aa3.48□□□□□ -1.85
VPS17YOR132W RIM15P43565 1770 aa3.48□□□□□ -1.85
VPS17YOR132W CDC15P27636 974 aa3.47□□□□□ -1.85
VPS17YOR132W URA7P28274 579 aaKnown RBP3.47□□□□□ -1.85
VPS17YOR132W MCM4P30665 933 aaKnown RBP3.47□□□□□ -1.85
VPS17YOR132W SRB5P32585 307 aa3.47□□□□□ -1.85
VPS17YOR132W PPQ1P32945 549 aa3.47□□□□□ -1.85
VPS17YOR132W YBL029WP38201 376 aa3.47□□□□□ -1.85
VPS17YOR132W YIL152WP40455 235 aa3.47□□□□□ -1.85
VPS17YOR132W SSU1P41930 458 aa3.47□□□□□ -1.85
VPS17YOR132W EPL1P43572 832 aa3.47□□□□□ -1.85
VPS17YOR132W RPN11P43588 306 aaKnown RBP3.47□□□□□ -1.85
VPS17YOR132W YNR068CP53754 272 aa3.47□□□□□ -1.85
VPS17YOR132W ALF1P53904 254 aa3.47□□□□□ -1.85
VPS17YOR132W EOS1P53938 366 aa3.47□□□□□ -1.85
VPS17YOR132W ECI1Q05871 280 aa3.47□□□□□ -1.85
VPS17YOR132W FMP45Q07651 309 aa3.47□□□□□ -1.85
VPS17YOR132W MLH2Q07980 695 aa3.47□□□□□ -1.85
VPS17YOR132W YLR112WQ12130 139 aa3.47□□□□□ -1.85
VPS17YOR132W ISN1Q99312 450 aa3.47□□□□□ -1.85
VPS17YOR132W SAC3P46674 1301 aa3.46□□□□□ -1.85
VPS17YOR132W PET111P08468 800 aa3.46□□□□□ -1.85
VPS17YOR132W MDH1P17505 334 aaKnown RBP RIP-Chip data3.46□□□□□ -1.85not detected
VPS17YOR132W ERG8P24521 451 aa3.46□□□□□ -1.85
VPS17YOR132W GYP6P32806 458 aa3.46□□□□□ -1.85
VPS17YOR132W OSH3P38713 996 aaKnown RBP3.46□□□□□ -1.85
VPS17YOR132W RGI2P40188 164 aa3.46□□□□□ -1.85
VPS17YOR132W PFK26P40433 827 aaKnown RBP3.46□□□□□ -1.85
VPS17YOR132W DOT5P40553 215 aa3.46□□□□□ -1.85
VPS17YOR132W SWP82P43554 623 aa3.46□□□□□ -1.85
VPS17YOR132W FET5P43561 622 aa3.46□□□□□ -1.85
VPS17YOR132W CTK2P46962 323 aa3.46□□□□□ -1.85
VPS17YOR132W SCS3P53012 380 aa3.46□□□□□ -1.85
VPS17YOR132W ERV25P54837 211 aaKnown RBP3.46□□□□□ -1.85
VPS17YOR132W RSM28Q03430 361 aa3.46□□□□□ -1.85
VPS17YOR132W RNH1Q04740 348 aa3.46□□□□□ -1.85
VPS17YOR132W YLH47Q06493 454 aa3.46□□□□□ -1.85
VPS17YOR132W ETT1Q08421 412 aaKnown RBP3.46□□□□□ -1.85
VPS17YOR132W APL4Q12028 832 aa3.46□□□□□ -1.85
VPS17YOR132W GPM3Q12326 303 aa3.46□□□□□ -1.85
VPS17YOR132W CHO1P08456 276 aa3.46□□□□□ -1.86
VPS17YOR132W TKL1P23254 680 aaKnown RBP3.46□□□□□ -1.86
VPS17YOR132W CLB3P24870 427 aa3.46□□□□□ -1.86
VPS17YOR132W YUR1P26725 428 aa3.46□□□□□ -1.86
VPS17YOR132W ALY1P36117 915 aa3.46□□□□□ -1.86
VPS17YOR132W RFT1P38206 574 aaPredicted RBP3.46□□□□□ -1.86
VPS17YOR132W ECM10P39987 644 aa3.46□□□□□ -1.86
VPS17YOR132W PCL6P40038 420 aa3.46□□□□□ -1.86
VPS17YOR132W MET28P40573 187 aa3.46□□□□□ -1.86
VPS17YOR132W ROK1P45818 564 aaPredicted RBP3.46□□□□□ -1.86
VPS17YOR132W VPS4P52917 437 aa3.46□□□□□ -1.86
VPS17YOR132W PRO2P54885 456 aaKnown RBP3.46□□□□□ -1.86
VPS17YOR132W ADA2Q02336 434 aa3.46□□□□□ -1.86
VPS17YOR132W YMR111CQ04461 462 aaPredicted RBP3.46□□□□□ -1.86
VPS17YOR132W MMR1Q06324 491 aa3.46□□□□□ -1.86
VPS17YOR132W SPE3Q12074 293 aaKnown RBP3.46□□□□□ -1.86
VPS17YOR132W PSY3Q12318 242 aa3.46□□□□□ -1.86
VPS17YOR132W QCR6P00127 147 aa3.45□□□□□ -1.86
VPS17YOR132W SUP35P05453 685 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W RPL42AP0CX27 106 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W RPL42BP0CX28 106 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W RAP1P11938 827 aa3.45□□□□□ -1.86
VPS17YOR132W SPB1P25582 841 aaPredicted RBP3.45□□□□□ -1.86
VPS17YOR132W YCR051WP25631 222 aa3.45□□□□□ -1.86
VPS17YOR132W ERV1P27882 189 aa3.45□□□□□ -1.86
VPS17YOR132W SAC1P32368 623 aaKnown RBP3.45□□□□□ -1.86
VPS17YOR132W SWH1P35845 1188 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms