RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C VPS54Q12071 889 aa4.41□□□□□ -1.7
VPS71YML041C HSP42Q12329 375 aa4.41□□□□□ -1.7
VPS71YML041C RHO2P06781 192 aa4.4□□□□□ -1.71
VPS71YML041C ERG11P10614 530 aa4.4□□□□□ -1.71
VPS71YML041C PEP5P12868 1029 aa4.4□□□□□ -1.71
VPS71YML041C SEC63P14906 663 aa4.4□□□□□ -1.71
VPS71YML041C YKL023WP36103 277 aaKnown RBP4.4□□□□□ -1.71
VPS71YML041C ATF1P40353 525 aa4.4□□□□□ -1.71
VPS71YML041C ECM27P47144 725 aa4.4□□□□□ -1.71
VPS71YML041C YJR154WP47181 346 aa4.4□□□□□ -1.71
VPS71YML041C TOM22P49334 152 aa4.4□□□□□ -1.71
VPS71YML041C KTR5P53966 522 aaPredicted RBP4.4□□□□□ -1.71
VPS71YML041C RHO4Q00246 291 aa4.4□□□□□ -1.71
VPS71YML041C PRP3Q03338 469 aaPredicted RBP4.4□□□□□ -1.71
VPS71YML041C HEL2Q05580 639 aaKnown RBP4.4□□□□□ -1.71
VPS71YML041C MMR1Q06324 491 aa4.4□□□□□ -1.71
VPS71YML041C YDL218WQ07629 317 aa4.4□□□□□ -1.71
VPS71YML041C YLR112WQ12130 139 aa4.4□□□□□ -1.71
VPS71YML041C NDJ1Q12366 352 aa4.4□□□□□ -1.71
VPS71YML041C GPH1P06738 902 aaKnown RBP4.39□□□□□ -1.71
VPS71YML041C RIP1P08067 215 aa4.39□□□□□ -1.71
VPS71YML041C RPL1AP0CX43 217 aaKnown RBP4.39□□□□□ -1.71
VPS71YML041C RPL1BP0CX44 217 aaKnown RBP4.39□□□□□ -1.71
VPS71YML041C RPB8P20436 146 aa4.39□□□□□ -1.71
VPS71YML041C RRP1P35178 278 aaPredicted RBP4.39□□□□□ -1.71
VPS71YML041C ARA1P38115 344 aa4.39□□□□□ -1.71
VPS71YML041C ROT2P38138 954 aa4.39□□□□□ -1.71
VPS71YML041C RFC3P38629 340 aa4.39□□□□□ -1.71
VPS71YML041C WSS1P38838 269 aa4.39□□□□□ -1.71
VPS71YML041C PES4P39684 611 aa4.39□□□□□ -1.71
VPS71YML041C SER3P40054 469 aa4.39□□□□□ -1.71
VPS71YML041C GAT1P43574 510 aa4.39□□□□□ -1.71
VPS71YML041C MLC1P53141 149 aa4.39□□□□□ -1.71
VPS71YML041C SMM1P53720 384 aaKnown RBP4.39□□□□□ -1.71
VPS71YML041C TOF1P53840 1238 aa4.39□□□□□ -1.71
VPS71YML041C ADA2Q02336 434 aa4.39□□□□□ -1.71
VPS71YML041C MGR3Q04472 501 aa4.39□□□□□ -1.71
VPS71YML041C COQ11Q05892 277 aa4.39□□□□□ -1.71
VPS71YML041C MCP2Q06567 569 aa4.39□□□□□ -1.71
VPS71YML041C YDL057WQ07379 328 aa4.39□□□□□ -1.71
VPS71YML041C THP1Q08231 455 aa4.39□□□□□ -1.71
VPS71YML041C RKM1Q08961 583 aaPredicted RBP4.39□□□□□ -1.71
VPS71YML041C AEP3Q12089 606 aa4.39□□□□□ -1.71
VPS71YML041C CRC1Q12289 327 aa4.39□□□□□ -1.71
VPS71YML041C SPO7P18410 259 aa4.38□□□□□ -1.71
VPS71YML041C ATP10P18496 279 aa4.38□□□□□ -1.71
VPS71YML041C AIM17P23180 465 aaKnown RBP4.38□□□□□ -1.71
VPS71YML041C POT1P27796 417 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
VPS71YML041C SNC1P31109 117 aa4.38□□□□□ -1.71
VPS71YML041C ATP11P32453 318 aa4.38□□□□□ -1.71
VPS71YML041C GYP6P32806 458 aa4.38□□□□□ -1.71
VPS71YML041C MMS4P38257 691 aa4.38□□□□□ -1.71
VPS71YML041C RRF1P38771 230 aa4.38□□□□□ -1.71
VPS71YML041C YIL024CP40543 189 aa4.38□□□□□ -1.71
VPS71YML041C ZPR1P53303 486 aaKnown RBP4.38□□□□□ -1.71
VPS71YML041C RPL15BP54780 204 aaPredicted RBP4.38□□□□□ -1.71
VPS71YML041C SHR3Q02774 210 aa4.38□□□□□ -1.71
VPS71YML041C EKI1Q03764 534 aa4.38□□□□□ -1.71
VPS71YML041C ACL4Q03771 387 aa4.38□□□□□ -1.71
VPS71YML041C YMR130WQ04223 302 aa4.38□□□□□ -1.71
VPS71YML041C ORM2Q06144 216 aa4.38□□□□□ -1.71
VPS71YML041C KEL3Q08979 651 aaPredicted RBP4.38□□□□□ -1.71
VPS71YML041C YLR278CQ05854 1341 aa4.38□□□□□ -1.71
VPS71YML041C EDE1P34216 1381 aa4.38□□□□□ -1.71
VPS71YML041C URA4P20051 364 aa4.37□□□□□ -1.71
VPS71YML041C CLN1P20437 546 aa4.37□□□□□ -1.71
VPS71YML041C GID7P25569 745 aa4.37□□□□□ -1.71
VPS71YML041C MCM4P30665 933 aaKnown RBP4.37□□□□□ -1.71
VPS71YML041C AFG1P32317 509 aa4.37□□□□□ -1.71
VPS71YML041C YEL043WP32618 956 aa4.37□□□□□ -1.71
VPS71YML041C SPC34P36131 295 aa4.37□□□□□ -1.71
VPS71YML041C BNA4P38169 460 aa4.37□□□□□ -1.71
VPS71YML041C TFG2P41896 400 aaPredicted RBP4.37□□□□□ -1.71
VPS71YML041C YJL132WP47014 750 aa4.37□□□□□ -1.71
VPS71YML041C RMD9P53140 646 aaKnown RBP4.37□□□□□ -1.71
VPS71YML041C CTL1Q03220 320 aaKnown RBP4.37□□□□□ -1.71
VPS71YML041C PPM1Q04081 328 aa4.37□□□□□ -1.71
VPS71YML041C MDM30Q05930 598 aa4.37□□□□□ -1.71
VPS71YML041C DIC1Q06143 298 aa4.37□□□□□ -1.71
VPS71YML041C YLR456WQ06199 204 aa4.37□□□□□ -1.71
VPS71YML041C ATX2Q12067 313 aa4.37□□□□□ -1.71
VPS71YML041C REX3Q12090 404 aa4.37□□□□□ -1.71
VPS71YML041C KRE2P27809 442 aa4.36□□□□□ -1.71
VPS71YML041C NIP1P32497 812 aaKnown RBP4.36□□□□□ -1.71
VPS71YML041C YPK3P38070 525 aa4.36□□□□□ -1.71
VPS71YML041C SIF2P38262 535 aa4.36□□□□□ -1.71
VPS71YML041C YER130CP39959 443 aa4.36□□□□□ -1.71
VPS71YML041C YPT11P48559 417 aa4.36□□□□□ -1.71
VPS71YML041C ALT2P52892 507 aa4.36□□□□□ -1.71
VPS71YML041C NCS2P53923 493 aaPredicted RBP4.36□□□□□ -1.71
VPS71YML041C ERG13P54839 491 aaKnown RBP4.36□□□□□ -1.71
VPS71YML041C YPL014WQ02606 381 aa4.36□□□□□ -1.71
VPS71YML041C SEG1Q04279 960 aa4.36□□□□□ -1.71
VPS71YML041C ECI1Q05871 280 aa4.36□□□□□ -1.71
VPS71YML041C RDR1Q08904 546 aa4.36□□□□□ -1.71
VPS71YML041C YDR061WQ12298 539 aa4.36□□□□□ -1.71
VPS71YML041C NBL1Q3E7Y6 73 aa4.36□□□□□ -1.71
VPS71YML041C RAV1P47104 1357 aa4.36□□□□□ -1.71
VPS71YML041C YAP1P19880 650 aaKnown RBP4.35□□□□□ -1.71
VPS71YML041C HIR2P32480 875 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms