RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	YJL132W	P47014	750 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	RPT4	P53549	437 aa	Known RBP	4.57	□□□□□ -1.68
SIR1	YKR101W	YLR456W	Q06199	204 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	TPO3	Q06451	622 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	THP1	Q08231	455 aa		4.57	□□□□□ -1.68
SIR1	YKR101W	MYO4	P32492	1471 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	ARO3	P14843	370 aa	Known RBP	4.56	□□□□□ -1.68
SIR1	YKR101W	SPO7	P18410	259 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	ADY2	P25613	283 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	PML1	Q07930	204 aa	Predicted RBP	4.56	□□□□□ -1.68
SIR1	YKR101W	REX3	Q12090	404 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	CFT2	Q12102	859 aa	Predicted RBP	4.56	□□□□□ -1.68
SIR1	YKR101W	VAM3	Q12241	283 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	FRE7	Q12333	620 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	RAV1	P47104	1357 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	SPS4	P09937	338 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	MSP1	P28737	362 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	HIR2	P32480	875 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	SHP1	P34223	423 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	UIP5	P36137	443 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	ALK1	P43633	760 aa	Known RBP	4.56	□□□□□ -1.68
SIR1	YKR101W	FYV8	P46949	817 aa	Known RBP	4.56	□□□□□ -1.68
SIR1	YKR101W	URB2	P47108	1174 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	PSY3	Q12318	242 aa		4.56	□□□□□ -1.68
SIR1	YKR101W	LTE1	P07866	1435 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	RIP1	P08067	215 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	RPS2	P25443	254 aa	Known RBP	4.55	□□□□□ -1.68
SIR1	YKR101W	SMI1	P32566	505 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	MSN2	P33748	704 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	HOT13	P36078	116 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	ARA1	P38115	344 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	LEU5	P38702	357 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	TOM22	P49334	152 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	ALT2	P52892	507 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	DUG3	P53871	357 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	YMR130W	Q04223	302 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	MDM30	Q05930	598 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	TY1B-BR	Q12193	1756 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	TY1B-GR3	Q12316	1755 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	TY1B-OR	Q92393	1755 aa		4.55	□□□□□ -1.68
SIR1	YKR101W	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	BRF1	P29056	596 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	GYP6	P32806	458 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	APD1	P38281	316 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	FAD1	P38913	306 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	MEP1	P40260	492 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	GPI8	P49018	411 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	MLC1	P53141	149 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	OCA2	P53949	197 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	SEC5	P89102	971 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	APM1	Q00776	475 aa	Predicted RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	TY1B-A	O13527	1196 aa	Known RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	YML002W	P0CF17	737 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	SEC63	P14906	663 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	ATP10	P18496	279 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	SPC110	P32380	944 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	DAD2	P36162	133 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	ROT2	P38138	954 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	BNA4	P38169	460 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	SYG1	P40528	902 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	IRC24	P40580	263 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	BPL1	P48445	690 aa	Predicted RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	ZPR1	P53303	486 aa	Known RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	SMM1	P53720	384 aa	Known RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	DIS3	Q08162	1001 aa	Known RBP	4.54	□□□□□ -1.68
SIR1	YKR101W	TY2B-B	Q12491	1770 aa		4.54	□□□□□ -1.68
SIR1	YKR101W	SUI2	P20459	304 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	ATP11	P32453	318 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	ZTA1	P38230	334 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	MLH1	P38920	769 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	IRC7	P43623	340 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	YVH1	Q02256	364 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	SWF1	Q04629	336 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	DCS1	Q06151	350 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	AEP3	Q12089	606 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-H	O13535	1793 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-DR5	P0C2I2	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-DR6	P0C2I3	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-LR2	P0C2I5	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-PR2	P0C2J0	1756 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-JR1	P47098	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-ER1	Q03612	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-GR2	Q12269	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-OL	Q12273	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-PL	Q12414	1755 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	TY1B-DR3	Q99231	1755 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	COX3	P00420	269 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	GPH1	P06738	902 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	RHO2	P06781	192 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	YKL023W	P36103	277 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	FLO10	P36170	1169 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	ASC1	P38011	319 aa	Known RBP	4.53	□□□□□ -1.68
SIR1	YKR101W	DUG2	P38149	878 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	PFF1	P38244	976 aa		4.53	□□□□□ -1.68
SIR1	YKR101W	RFC3	P38629	340 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms