RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W DRS1P32892 752 aaKnown RBP12.65□□□□□ -0.38
SIR1YKR101W MTC1P47018 478 aaKnown RBP11.96□□□□□ -0.5
SIR1YKR101W BFR2Q06631 534 aaKnown RBP11.2□□□□□ -0.62
SIR1YKR101W TFA1P36100 482 aa11.01□□□□□ -0.65
SIR1YKR101W AVT3P36062 692 aa10.63□□□□□ -0.71
SIR1YKR101W DIP2Q12220 943 aaPredicted RBP10.56□□□□□ -0.72
SIR1YKR101W RQC2Q12532 1038 aaKnown RBP9.82□□□□□ -0.84
SIR1YKR101W RSE1Q04693 1361 aaKnown RBP9.74□□□□□ -0.85
SIR1YKR101W ISW2Q08773 1120 aa9.52□□□□□ -0.89
SIR1YKR101W RPG1P38249 964 aaKnown RBP9.43□□□□□ -0.9
SIR1YKR101W RPL17AP05740 184 aaKnown RBP9.37□□□□□ -0.91
SIR1YKR101W RPL17BP46990 184 aaKnown RBP9.37□□□□□ -0.91
SIR1YKR101W DMA1P38823 416 aa9.34□□□□□ -0.91
SIR1YKR101W PRI1P10363 409 aa9.25□□□□□ -0.93
SIR1YKR101W PTP3P40048 928 aa9.21□□□□□ -0.94
SIR1YKR101W REB1P21538 810 aa9.15□□□□□ -0.95
SIR1YKR101W SPT21P35209 758 aa9.13□□□□□ -0.95
SIR1YKR101W RIM101P33400 625 aa9.12□□□□□ -0.95
SIR1YKR101W FAP1P53971 965 aa9.04□□□□□ -0.96
SIR1YKR101W TAF7Q05021 590 aa8.97□□□□□ -0.97
SIR1YKR101W SSP1P38871 571 aa8.97□□□□□ -0.97
SIR1YKR101W AAD16Q02895 342 aa8.95□□□□□ -0.98
SIR1YKR101W OXP1P28273 1286 aa8.9□□□□□ -0.98
SIR1YKR101W TSR3Q12094 313 aaKnown RBP8.84□□□□□ -0.99
SIR1YKR101W YAH1Q12184 172 aaKnown RBP8.8□□□□□ -1
SIR1YKR101W LEO1P38439 464 aa8.76□□□□□ -1.01
SIR1YKR101W YLR271WQ06152 274 aa8.75□□□□□ -1.01
SIR1YKR101W YKR023WP36119 530 aaKnown RBP8.7□□□□□ -1.02
SIR1YKR101W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SIR1YKR101W YIL055CP40523 627 aaKnown RBP8.65□□□□□ -1.02
SIR1YKR101W SAS10Q12136 610 aaPredicted RBP8.63□□□□□ -1.03
SIR1YKR101W MGA2P40578 1113 aa8.58□□□□□ -1.04
SIR1YKR101W RSM7P47150 247 aa8.55□□□□□ -1.04
SIR1YKR101W LEU3P08638 886 aa8.54□□□□□ -1.04
SIR1YKR101W CST9Q06032 482 aa8.54□□□□□ -1.04
SIR1YKR101W HOP09932 586 aa8.51□□□□□ -1.05
SIR1YKR101W TFC8Q12308 588 aa8.5□□□□□ -1.05
SIR1YKR101W DCD1P06773 312 aa8.48□□□□□ -1.05
SIR1YKR101W PRY3P47033 881 aa8.44□□□□□ -1.06
SIR1YKR101W PSD2P53037 1138 aaKnown RBP8.44□□□□□ -1.06
SIR1YKR101W MRPL32P25348 183 aa8.39□□□□□ -1.07
SIR1YKR101W AI2P03876 854 aa8.38□□□□□ -1.07
SIR1YKR101W CDC27P38042 758 aa8.37□□□□□ -1.07
SIR1YKR101W RAM2P29703 316 aa8.3□□□□□ -1.08
SIR1YKR101W BCH2P36122 765 aa8.29□□□□□ -1.08
SIR1YKR101W RPN1P38764 993 aaKnown RBP8.22□□□□□ -1.09
SIR1YKR101W DMA2P53924 522 aa8.22□□□□□ -1.09
SIR1YKR101W RCR1P38212 213 aa8.22□□□□□ -1.09
SIR1YKR101W SET1P38827 1080 aaKnown RBP8.21□□□□□ -1.09
SIR1YKR101W BBC1P47068 1157 aa8.21□□□□□ -1.1
SIR1YKR101W YPR148CQ06523 435 aa8.18□□□□□ -1.1
SIR1YKR101W EPS1P40557 701 aa8.17□□□□□ -1.1
SIR1YKR101W MRM1P25270 412 aa8.17□□□□□ -1.1
SIR1YKR101W YCK3P39962 524 aa8.17□□□□□ -1.1
SIR1YKR101W VPS70P47161 811 aa8.15□□□□□ -1.11
SIR1YKR101W SPB4P25808 606 aaPredicted RBP8.13□□□□□ -1.11
SIR1YKR101W ABP1P15891 592 aaKnown RBP8.11□□□□□ -1.11
SIR1YKR101W BDF1P35817 686 aa8.11□□□□□ -1.11
SIR1YKR101W CKB1P43639 278 aa8.1□□□□□ -1.11
SIR1YKR101W RTG3P38165 486 aa8.06□□□□□ -1.12
SIR1YKR101W MAK11P20484 414 aaKnown RBP8.04□□□□□ -1.12
SIR1YKR101W IFH1P39520 1085 aa8.04□□□□□ -1.12
SIR1YKR101W DSF2P38213 736 aa8.01□□□□□ -1.13
SIR1YKR101W SCY1P53009 804 aa7.99□□□□□ -1.13
SIR1YKR101W VPS29P38759 282 aa7.98□□□□□ -1.13
SIR1YKR101W PBS2P08018 668 aa7.97□□□□□ -1.13
SIR1YKR101W HAA1Q12753 694 aaKnown RBP7.95□□□□□ -1.14
SIR1YKR101W COQ8P27697 501 aa7.95□□□□□ -1.14
SIR1YKR101W RLF2Q12495 606 aa7.93□□□□□ -1.14
SIR1YKR101W KIN1P13185 1064 aa7.91□□□□□ -1.14
SIR1YKR101W MAP2P38174 421 aaKnown RBP7.9□□□□□ -1.14
SIR1YKR101W YNR021WP53723 404 aaKnown RBP7.9□□□□□ -1.14
SIR1YKR101W GLC3P32775 704 aa7.87□□□□□ -1.15
SIR1YKR101W EDS1P38073 919 aa7.87□□□□□ -1.15
SIR1YKR101W STS1P38637 319 aa7.86□□□□□ -1.15
SIR1YKR101W NUP42P49686 430 aaKnown RBP7.84□□□□□ -1.15
SIR1YKR101W MAM3Q12296 706 aa7.84□□□□□ -1.15
SIR1YKR101W DIT2P21595 489 aa7.84□□□□□ -1.15
SIR1YKR101W IES2P40154 320 aa7.84□□□□□ -1.15
SIR1YKR101W MIF2P35201 549 aa7.83□□□□□ -1.16
SIR1YKR101W UBP10P53874 792 aaPredicted RBP7.83□□□□□ -1.16
SIR1YKR101W REF2P42073 533 aaPredicted RBP7.82□□□□□ -1.16
SIR1YKR101W NOP53Q12080 455 aaKnown RBP7.82□□□□□ -1.16
SIR1YKR101W AIM7Q12156 149 aa7.82□□□□□ -1.16
SIR1YKR101W YMR1P47147 688 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
SIR1YKR101W YFR006WP43590 535 aa7.79□□□□□ -1.16
SIR1YKR101W DBP1P24784 617 aaKnown RBP7.77□□□□□ -1.17
SIR1YKR101W GUA1P38625 525 aaKnown RBP7.77□□□□□ -1.17
SIR1YKR101W SLX5P32828 619 aaKnown RBP7.75□□□□□ -1.17
SIR1YKR101W COX6P00427 148 aa7.73□□□□□ -1.17
SIR1YKR101W PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
SIR1YKR101W MAK21Q12176 1025 aaKnown RBP7.7□□□□□ -1.18
SIR1YKR101W YOR238WQ08634 303 aa7.69□□□□□ -1.18
SIR1YKR101W YDR090CQ03193 310 aa7.67□□□□□ -1.18
SIR1YKR101W ATF2P53296 535 aa7.66□□□□□ -1.18
SIR1YKR101W UBP14P38237 781 aaKnown RBP7.64□□□□□ -1.19
SIR1YKR101W VHR2P40041 505 aa7.64□□□□□ -1.19
SIR1YKR101W HGH1P48362 394 aaKnown RBP7.64□□□□□ -1.19
SIR1YKR101W HPC2Q01448 625 aa7.63□□□□□ -1.19
SIR1YKR101W PIB1Q06651 286 aa7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms