RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF2	YGR140W	CRM1	P30822	1084 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	MRPL37	P36532	105 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	TSC10	P38342	320 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	MNN9	P39107	395 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	VHS2	P40463	436 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	RPN14	P53196	417 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	ERG5	P54781	538 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	YMR160W	Q03823	816 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	CSI1	Q04368	295 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	YDL057W	Q07379	328 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	THP1	Q08231	455 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	ATG9	Q12142	997 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	RNR2	P09938	399 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	SCH9	P11792	824 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	HNM1	P19807	563 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	SRP54	P20424	541 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	ERG4	P25340	473 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	GID7	P25569	745 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	KRE2	P27809	442 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	HSP104	P31539	908 aa	Known RBP	2.26	□□□□□ -2.05
CBF2	YGR140W	COT1	P32798	439 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	KKQ8	P36004	724 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	YKR073C	P36153	106 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	STV1	P37296	890 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	EFM2	P38347	419 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	MLH1	P38920	769 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	ATG27	P46989	271 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	MPS2	P53159	387 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	COQ9	Q05779	260 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	GSH2	Q08220	491 aa		2.26	□□□□□ -2.05
CBF2	YGR140W	VPS63	O13549	108 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	TDH1	P00360	332 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	BI2	P03873	423 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	LEU4	P06208	619 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	ALG7	P07286	448 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	PRP6	P19735	899 aa	Predicted RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	DBP3	P20447	523 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	RDS1	P25611	832 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	PTC6	P25646	442 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	ICL1	P28240	557 aa	Predicted RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	SPC110	P32380	944 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	SHP1	P34223	423 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	YMR262W	P38430	313 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	MSG5	P38590	489 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	MNN10	P50108	393 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	ROG1	P53118	685 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	RIM8	P53179	542 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	RPC11	Q04307	110 aa	Predicted RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	THI3	Q07471	609 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	PEX27	Q08580	376 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	CDC21	P06785	304 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	PET111	P08468	800 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	STE4	P18851	423 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	YKL023W	P36103	277 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	AIM3	P38266	947 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	PCL5	P38794	229 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	SNL1	P40548	159 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	SNG1	P46950	547 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	ECL1	P48235	211 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	CGR1	P53188	120 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	YNL092W	P53934	400 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	HEF3	P53978	1044 aa	Known RBP	2.25	□□□□□ -2.05
CBF2	YGR140W	EKI1	Q03764	534 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	CYK3	Q07533	885 aa		2.25	□□□□□ -2.05
CBF2	YGR140W	RTC1	Q08281	1341 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	PCT1	P13259	424 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	RHB1	P25378	209 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	HRR25	P29295	494 aa	Known RBP	2.24	□□□□□ -2.05
CBF2	YGR140W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.24	□□□□□ -2.05	not detected
CBF2	YGR140W	EMP70	P32802	667 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	LST4	P34239	828 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.24	□□□□□ -2.05	not detected
CBF2	YGR140W	ATP3	P38077	311 aa	Known RBP	2.24	□□□□□ -2.05
CBF2	YGR140W	SUL1	P38359	859 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	ANS1	P38832	159 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	LIN1	P38852	340 aa	Predicted RBP	2.24	□□□□□ -2.05
CBF2	YGR140W	YMR147W	P40218	223 aa	Known RBP	2.24	□□□□□ -2.05
CBF2	YGR140W	CIN1	P40987	1014 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	AIM22	P47051	409 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	BRO1	P48582	844 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	YGR266W	P53326	701 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	CPR8	P53728	308 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	GIP3	Q03016	1276 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	GRX3	Q03835	250 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	VPS20	Q04272	221 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	ECM18	Q04623	453 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	RRN11	Q04712	507 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	MSC3	Q05812	728 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	KAP95	Q06142	861 aa	Known RBP	2.24	□□□□□ -2.05
CBF2	YGR140W	YPR172W	Q06608	200 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.24	□□□□□ -2.05	not detected
CBF2	YGR140W	SPT10	P35208	640 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	ROT2	P38138	954 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	BNA4	P38169	460 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	RRN10	P38204	145 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	SPC97	P38863	823 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	MBB1	P39534	108 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	TOM22	P49334	152 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	DSL1	P53847	754 aa		2.24	□□□□□ -2.05
CBF2	YGR140W	UTP6	Q02354	440 aa	Known RBP	2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms