Protein–RNA interactions for Protein: O13549

VPS63, Uncharacterized protein VPS63, yeastyeast

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS63O13549 NSR1YGR159C 1245 nt16.75■□□□□ 0.27
VPS63O13549 YML009W-BYML009W-B 477 nt16.64■□□□□ 0.25
VPS63O13549 NOP1YDL014W 984 nt16.12■□□□□ 0.17
VPS63O13549 MDJ1YFL016C 1536 nt15.06■□□□□ 0
VPS63O13549 YKL036CYKL036C 393 nt14.6□□□□□ -0.07
VPS63O13549 SRX1YKL086W 384 nt14.02□□□□□ -0.17
VPS63O13549 Q0297Q0297 156 nt13.95□□□□□ -0.18
VPS63O13549 YJL027CYJL027C 417 nt13.94□□□□□ -0.18
VPS63O13549 YCR051WYCR051W 669 nt13.33□□□□□ -0.28
VPS63O13549 DBP2YNL112W 1641 nt13.18□□□□□ -0.3
VPS63O13549 SCS3YGL126W 1143 nt13.12□□□□□ -0.31
VPS63O13549 YBR190WYBR190W 312 nt12.94□□□□□ -0.34
VPS63O13549 TRN1tP(UGG)A 72 nt12.8□□□□□ -0.36
VPS63O13549 SUF9tP(UGG)F 72 nt12.8□□□□□ -0.36
VPS63O13549 SUF8tP(UGG)H 72 nt12.8□□□□□ -0.36
VPS63O13549 tP(UGG)LtP(UGG)L 72 nt12.8□□□□□ -0.36
VPS63O13549 SUF7tP(UGG)M 72 nt12.8□□□□□ -0.36
VPS63O13549 tP(UGG)N1tP(UGG)N1 72 nt12.8□□□□□ -0.36
VPS63O13549 tP(UGG)N2tP(UGG)N2 72 nt12.8□□□□□ -0.36
VPS63O13549 tP(UGG)O1tP(UGG)O1 72 nt12.8□□□□□ -0.36
VPS63O13549 SUF11tP(UGG)O2 72 nt12.8□□□□□ -0.36
VPS63O13549 CCC1YLR220W 969 nt12.73□□□□□ -0.37
VPS63O13549 RTC3YHR087W 336 nt12.69□□□□□ -0.38
VPS63O13549 YOL085CYOL085C 342 nt12.63□□□□□ -0.39
VPS63O13549 RPP1BYDL130W 321 nt12.54□□□□□ -0.4
VPS63O13549 PKP1YIL042C 1185 nt12.47□□□□□ -0.41
VPS63O13549 RVS167YDR388W 1449 nt12.46□□□□□ -0.41
VPS63O13549 SCJ1YMR214W 1134 nt12.23□□□□□ -0.45
VPS63O13549 tP(UGG)O3tP(UGG)O3 72 nt12.05□□□□□ -0.48
VPS63O13549 PET122YER153C 765 nt11.98□□□□□ -0.49
VPS63O13549 SHR5YOL110W 714 nt11.93□□□□□ -0.5
VPS63O13549 PUT4YOR348C 1884 nt11.89□□□□□ -0.51
VPS63O13549 SCR1SCR1 522 nt11.87□□□□□ -0.51
VPS63O13549 Q0182Q0182 405 nt11.81□□□□□ -0.52
VPS63O13549 URN1YPR152C 1398 nt11.74□□□□□ -0.53
VPS63O13549 ATS1YAL020C 1002 nt11.68□□□□□ -0.54
VPS63O13549 DEP1YAL013W 1218 nt11.67□□□□□ -0.54
VPS63O13549 YDJ1YNL064C 1230 nt11.66□□□□□ -0.54
VPS63O13549 SSA3YBL075C 1950 nt11.65□□□□□ -0.54
VPS63O13549 RRN5YLR141W 1092 nt11.63□□□□□ -0.55
VPS63O13549 OPI9YLR338W 858 nt11.62□□□□□ -0.55
VPS63O13549 SAH1YER043C 1350 nt11.6□□□□□ -0.55
VPS63O13549 ARE1YCR048W 1833 nt11.6□□□□□ -0.55
VPS63O13549 RPN10YHR200W 807 nt11.57□□□□□ -0.56
VPS63O13549 POA1YBR022W 534 nt11.54□□□□□ -0.56
VPS63O13549 YHR049C-AYHR049C-A 297 nt11.48□□□□□ -0.57
VPS63O13549 YNL208WYNL208W 600 nt11.48□□□□□ -0.57
VPS63O13549 GAR1YHR089C 618 nt11.46□□□□□ -0.57
VPS63O13549 YER088W-BYER088W-B 147 nt11.39□□□□□ -0.59
VPS63O13549 RSB1YOR049C 1065 nt11.35□□□□□ -0.59
VPS63O13549 BSC6YOL137W 1494 nt11.32□□□□□ -0.6
VPS63O13549 PUN1YLR414C 792 nt11.3□□□□□ -0.6
VPS63O13549 BUD23YCR047C 828 nt11.24□□□□□ -0.61
VPS63O13549 PTC2YER089C 1395 nt11.19□□□□□ -0.62
VPS63O13549 YJR018WYJR018W 363 nt11.19□□□□□ -0.62
VPS63O13549 NAB2YGL122C 1578 nt11.09□□□□□ -0.63
VPS63O13549 SSA1YAL005C 1929 nt11.08□□□□□ -0.64
VPS63O13549 TIR1YER011W 765 nt11.08□□□□□ -0.64
VPS63O13549 MOT3YMR070W 1473 nt11.07□□□□□ -0.64
VPS63O13549 RPP2BYDR382W 333 nt10.96□□□□□ -0.65
VPS63O13549 FPR4YLR449W 1179 nt10.9□□□□□ -0.66
VPS63O13549 DAL1YIR027C 1383 nt10.9□□□□□ -0.67
VPS63O13549 SPT5YML010W 3192 nt10.87□□□□□ -0.67
VPS63O13549 YJR120WYJR120W 351 nt10.86□□□□□ -0.67
VPS63O13549 INM2YDR287W 879 nt10.85□□□□□ -0.67
VPS63O13549 FIS1YIL065C 468 nt10.85□□□□□ -0.67
VPS63O13549 PST2YDR032C 597 nt10.83□□□□□ -0.68
VPS63O13549 PHO4YFR034C 939 nt10.76□□□□□ -0.69
VPS63O13549 YBL100CYBL100C 315 nt10.69□□□□□ -0.7
VPS63O13549 SRB2YHR041C 633 nt10.66□□□□□ -0.7
VPS63O13549 SSA4YER103W 1929 nt10.65□□□□□ -0.7
VPS63O13549 MEP2YNL142W 1500 nt10.64□□□□□ -0.71
VPS63O13549 BDH2YAL061W 1254 nt10.64□□□□□ -0.71
VPS63O13549 YPS1YLR120C 1710 nt10.64□□□□□ -0.71
VPS63O13549 YHR165W-AYHR165W-A 312 nt10.59□□□□□ -0.71
VPS63O13549 FUN26YAL022C 1554 nt10.55□□□□□ -0.72
VPS63O13549 FPS1YLL043W 2010 nt10.55□□□□□ -0.72
VPS63O13549 YDR095CYDR095C 411 nt10.52□□□□□ -0.73
VPS63O13549 WWM1YFL010C 636 nt10.52□□□□□ -0.73
VPS63O13549 TRM9YML014W 840 nt10.52□□□□□ -0.73
VPS63O13549 ALF1YNL148C 765 nt10.49□□□□□ -0.73
VPS63O13549 LSM3YLR438C-A 270 nt10.47□□□□□ -0.73
VPS63O13549 DCW1YKL046C 1350 nt10.45□□□□□ -0.74
VPS63O13549 SHU1YHL006C 453 nt10.45□□□□□ -0.74
VPS63O13549 YGR021WYGR021W 873 nt10.43□□□□□ -0.74
VPS63O13549 CCT6YDR188W 1641 nt10.38□□□□□ -0.75
VPS63O13549 YFL021C-AYFL021C-A 855 nt10.38□□□□□ -0.75
VPS63O13549 YAL037C-BYAL037C-B 975 nt10.38□□□□□ -0.75
VPS63O13549 SUF2tP(AGG)C 72 nt10.37□□□□□ -0.75
VPS63O13549 SUF10tP(AGG)N 72 nt10.37□□□□□ -0.75
VPS63O13549 YMR090WYMR090W 684 nt10.37□□□□□ -0.75
VPS63O13549 RPP2AYOL039W 321 nt10.36□□□□□ -0.75
VPS63O13549 EMI2YDR516C 1503 nt10.34□□□□□ -0.75
VPS63O13549 HOM6YJR139C 1080 nt10.33□□□□□ -0.76
VPS63O13549 YKL097CYKL097C 411 nt10.32□□□□□ -0.76
VPS63O13549 PTP1YDL230W 1008 nt10.27□□□□□ -0.77
VPS63O13549 SIS1YNL007C 1059 nt10.27□□□□□ -0.77
VPS63O13549 CAC2YML102W 1407 nt10.24□□□□□ -0.77
VPS63O13549 YDL221WYDL221W 552 nt10.24□□□□□ -0.77
VPS63O13549 MNP1YGL068W 585 nt10.24□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms