RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C RPL15BP54780 204 aaPredicted RBP3.01□□□□□ -1.93
MSH4YFL003C SEC5P89102 971 aa3.01□□□□□ -1.93
MSH4YFL003C MMR1Q06324 491 aa3.01□□□□□ -1.93
MSH4YFL003C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
MSH4YFL003C AFI1Q99222 893 aa3.01□□□□□ -1.93
MSH4YFL003C TY3B-GQ99315 1547 aa3.01□□□□□ -1.93
MSH4YFL003C USO1P25386 1790 aa3□□□□□ -1.93
MSH4YFL003C SNF3P10870 884 aa3□□□□□ -1.93
MSH4YFL003C SEC63P14906 663 aa3□□□□□ -1.93
MSH4YFL003C PPZ1P26570 692 aa3□□□□□ -1.93
MSH4YFL003C SWH1P35845 1188 aa3□□□□□ -1.93
MSH4YFL003C HEL1P36113 551 aa3□□□□□ -1.93
MSH4YFL003C RPL32P38061 130 aaKnown RBP3□□□□□ -1.93
MSH4YFL003C TCM62P38228 572 aaKnown RBP3□□□□□ -1.93
MSH4YFL003C MBB1P39534 108 aa3□□□□□ -1.93
MSH4YFL003C STU2P46675 888 aa3□□□□□ -1.93
MSH4YFL003C DLD2P46681 530 aaKnown RBP3□□□□□ -1.93
MSH4YFL003C MDE1P47095 244 aa3□□□□□ -1.93
MSH4YFL003C CWC22P53333 577 aaKnown RBP3□□□□□ -1.93
MSH4YFL003C APM1Q00776 475 aaPredicted RBP3□□□□□ -1.93
MSH4YFL003C PDS5Q04264 1277 aa3□□□□□ -1.93
MSH4YFL003C MDM30Q05930 598 aa3□□□□□ -1.93
MSH4YFL003C YOR389WQ08912 624 aa3□□□□□ -1.93
MSH4YFL003C APL5Q08951 932 aaKnown RBP3□□□□□ -1.93
MSH4YFL003C TSC11P40061 1430 aa3□□□□□ -1.93
MSH4YFL003C IQG1Q12280 1495 aa3□□□□□ -1.93
MSH4YFL003C RFC3P38629 340 aa3□□□□□ -1.93
MSH4YFL003C ATG27P46989 271 aa3□□□□□ -1.93
MSH4YFL003C SMC3P47037 1230 aa3□□□□□ -1.93
MSH4YFL003C CUL3P53202 744 aa3□□□□□ -1.93
MSH4YFL003C NCS2P53923 493 aaPredicted RBP3□□□□□ -1.93
MSH4YFL003C UAF30Q08747 228 aa3□□□□□ -1.93
MSH4YFL003C CLC1P17891 233 aa2.99□□□□□ -1.93
MSH4YFL003C PPH22P23595 377 aa2.99□□□□□ -1.93
MSH4YFL003C BOS1P25385 244 aa2.99□□□□□ -1.93
MSH4YFL003C SIF2P38262 535 aa2.99□□□□□ -1.93
MSH4YFL003C TIF4631P39935 952 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C YER130CP39959 443 aa2.99□□□□□ -1.93
MSH4YFL003C NAS2P40555 220 aa2.99□□□□□ -1.93
MSH4YFL003C CAK1P43568 368 aaPredicted RBP2.99□□□□□ -1.93
MSH4YFL003C NET1P47035 1189 aa2.99□□□□□ -1.93
MSH4YFL003C TOF1P53840 1238 aa2.99□□□□□ -1.93
MSH4YFL003C HEF3P53978 1044 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C EMI2Q04409 500 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C YDL057WQ07379 328 aa2.99□□□□□ -1.93
MSH4YFL003C RPN5Q12250 445 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C RPL31BP0C2H9 113 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C GAC1P28006 793 aa2.99□□□□□ -1.93
MSH4YFL003C YHR210CP38893 341 aa2.99□□□□□ -1.93
MSH4YFL003C PHO90P39535 881 aa2.99□□□□□ -1.93
MSH4YFL003C AFG3P39925 761 aa2.99□□□□□ -1.93
MSH4YFL003C SYG1P40528 902 aa2.99□□□□□ -1.93
MSH4YFL003C ATP23P53722 227 aa2.99□□□□□ -1.93
MSH4YFL003C TOF2Q02208 771 aa2.99□□□□□ -1.93
MSH4YFL003C KAP120Q02932 1032 aa2.99□□□□□ -1.93
MSH4YFL003C ETT1Q08421 412 aaKnown RBP2.99□□□□□ -1.93
MSH4YFL003C BI2P03873 423 aa2.98□□□□□ -1.93
MSH4YFL003C RPL3P14126 387 aaKnown RBP2.98□□□□□ -1.93
MSH4YFL003C ARO3P14843 370 aaKnown RBP2.98□□□□□ -1.93
MSH4YFL003C SPB1P25582 841 aaPredicted RBP2.98□□□□□ -1.93
MSH4YFL003C SMI1P32566 505 aa2.98□□□□□ -1.93
MSH4YFL003C TUL1P36096 758 aa2.98□□□□□ -1.93
MSH4YFL003C GND1P38720 489 aaKnown RBP2.98□□□□□ -1.93
MSH4YFL003C YFR016CP43597 1233 aaKnown RBP2.98□□□□□ -1.93
MSH4YFL003C YGL108CP53139 140 aa2.98□□□□□ -1.93
MSH4YFL003C YNL058CP53947 316 aa2.98□□□□□ -1.93
MSH4YFL003C VTA1Q06263 330 aa2.98□□□□□ -1.93
MSH4YFL003C ECM30Q06673 1274 aa2.98□□□□□ -1.93
MSH4YFL003C YLR112WQ12130 139 aa2.98□□□□□ -1.93
MSH4YFL003C RKM5Q12367 367 aa2.98□□□□□ -1.93
MSH4YFL003C SNQ2P32568 1501 aaKnown RBP2.98□□□□□ -1.93
MSH4YFL003C COR1P07256 457 aa2.98□□□□□ -1.93
MSH4YFL003C SPO11P23179 398 aa2.98□□□□□ -1.93
MSH4YFL003C COQ3P27680 312 aa2.98□□□□□ -1.93
MSH4YFL003C GYP6P32806 458 aa2.98□□□□□ -1.93
MSH4YFL003C YME2P32843 850 aa2.98□□□□□ -1.93
MSH4YFL003C PPZ2P33329 710 aa2.98□□□□□ -1.93
MSH4YFL003C MSN2P33748 704 aa2.98□□□□□ -1.93
MSH4YFL003C LTV1P34078 463 aa2.98□□□□□ -1.93
MSH4YFL003C DAD2P36162 133 aa2.98□□□□□ -1.93
MSH4YFL003C APD1P38281 316 aa2.98□□□□□ -1.93
MSH4YFL003C RRT2P38332 387 aa2.98□□□□□ -1.93
MSH4YFL003C FET5P43561 622 aa2.98□□□□□ -1.93
MSH4YFL003C YJR154WP47181 346 aa2.98□□□□□ -1.93
MSH4YFL003C CTF3Q12748 733 aa2.98□□□□□ -1.93
MSH4YFL003C STU1P38198 1513 aa2.98□□□□□ -1.93
MSH4YFL003C COX3P00420 269 aa2.97□□□□□ -1.93
MSH4YFL003C RPL1AP0CX43 217 aaKnown RBP2.97□□□□□ -1.93
MSH4YFL003C RPL1BP0CX44 217 aaKnown RBP2.97□□□□□ -1.93
MSH4YFL003C TFB1P32776 642 aa2.97□□□□□ -1.93
MSH4YFL003C DBP8P38719 431 aa2.97□□□□□ -1.93
MSH4YFL003C YHR054CP38780 354 aa2.97□□□□□ -1.93
MSH4YFL003C YOR1P53049 1477 aa2.97□□□□□ -1.93
MSH4YFL003C YGR111WP53265 400 aa2.97□□□□□ -1.93
MSH4YFL003C CAF130P53280 1122 aaPredicted RBP2.97□□□□□ -1.93
MSH4YFL003C AAT1Q01802 451 aa2.97□□□□□ -1.93
MSH4YFL003C LGE1Q02796 332 aaKnown RBP2.97□□□□□ -1.93
MSH4YFL003C RRI1Q12468 440 aa2.97□□□□□ -1.93
MSH4YFL003C YME1P32795 747 aa2.97□□□□□ -1.93
MSH4YFL003C PIM1P36775 1133 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms