RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C DRS1P32892 752 aaKnown RBP8.7□□□□□ -1.02
MSH4YFL003C MTC1P47018 478 aaKnown RBP8.4□□□□□ -1.06
MSH4YFL003C BFR2Q06631 534 aaKnown RBP7.62□□□□□ -1.19
MSH4YFL003C TFA1P36100 482 aa7.49□□□□□ -1.21
MSH4YFL003C AVT3P36062 692 aa7.44□□□□□ -1.22
MSH4YFL003C DIP2Q12220 943 aaPredicted RBP7.34□□□□□ -1.23
MSH4YFL003C RSE1Q04693 1361 aaKnown RBP6.76□□□□□ -1.33
MSH4YFL003C RPG1P38249 964 aaKnown RBP6.64□□□□□ -1.35
MSH4YFL003C ISW2Q08773 1120 aa6.64□□□□□ -1.35
MSH4YFL003C PRI1P10363 409 aa6.61□□□□□ -1.35
MSH4YFL003C RPL17AP05740 184 aaKnown RBP6.51□□□□□ -1.37
MSH4YFL003C RPL17BP46990 184 aaKnown RBP6.51□□□□□ -1.37
MSH4YFL003C SPT21P35209 758 aa6.46□□□□□ -1.37
MSH4YFL003C RIM101P33400 625 aa6.4□□□□□ -1.39
MSH4YFL003C FAP1P53971 965 aa6.4□□□□□ -1.39
MSH4YFL003C AAD16Q02895 342 aa6.35□□□□□ -1.39
MSH4YFL003C REB1P21538 810 aa6.32□□□□□ -1.4
MSH4YFL003C RQC2Q12532 1038 aaKnown RBP6.32□□□□□ -1.4
MSH4YFL003C DMA1P38823 416 aa6.29□□□□□ -1.4
MSH4YFL003C PTP3P40048 928 aa6.28□□□□□ -1.4
MSH4YFL003C OXP1P28273 1286 aa6.27□□□□□ -1.41
MSH4YFL003C TSR3Q12094 313 aaKnown RBP6.26□□□□□ -1.41
MSH4YFL003C YKR023WP36119 530 aaKnown RBP6.19□□□□□ -1.42
MSH4YFL003C SSP1P38871 571 aa6.16□□□□□ -1.42
MSH4YFL003C YLR271WQ06152 274 aa6.12□□□□□ -1.43
MSH4YFL003C YAH1Q12184 172 aaKnown RBP6.05□□□□□ -1.44
MSH4YFL003C YCK3P39962 524 aa6.04□□□□□ -1.44
MSH4YFL003C PRY3P47033 881 aa6.02□□□□□ -1.45
MSH4YFL003C TFC8Q12308 588 aa6.01□□□□□ -1.45
MSH4YFL003C DCD1P06773 312 aa6□□□□□ -1.45
MSH4YFL003C HOP09932 586 aa5.99□□□□□ -1.45
MSH4YFL003C CDC27P38042 758 aa5.96□□□□□ -1.45
MSH4YFL003C CST9Q06032 482 aa5.96□□□□□ -1.45
MSH4YFL003C RSM7P47150 247 aa5.93□□□□□ -1.46
MSH4YFL003C YIL055CP40523 627 aaKnown RBP5.93□□□□□ -1.46
MSH4YFL003C SAS10Q12136 610 aaPredicted RBP5.93□□□□□ -1.46
MSH4YFL003C MGA2P40578 1113 aa5.92□□□□□ -1.46
MSH4YFL003C PSD2P53037 1138 aaKnown RBP5.92□□□□□ -1.46
MSH4YFL003C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
MSH4YFL003C MRPL32P25348 183 aa5.88□□□□□ -1.47
MSH4YFL003C BCH2P36122 765 aa5.87□□□□□ -1.47
MSH4YFL003C AI2P03876 854 aa5.84□□□□□ -1.47
MSH4YFL003C LEO1P38439 464 aa5.83□□□□□ -1.48
MSH4YFL003C TAF7Q05021 590 aa5.8□□□□□ -1.48
MSH4YFL003C RCR1P38212 213 aa5.78□□□□□ -1.48
MSH4YFL003C RAM2P29703 316 aa5.77□□□□□ -1.49
MSH4YFL003C LEU3P08638 886 aa5.75□□□□□ -1.49
MSH4YFL003C EPS1P40557 701 aa5.73□□□□□ -1.49
MSH4YFL003C BDF1P35817 686 aa5.72□□□□□ -1.49
MSH4YFL003C MRM1P25270 412 aa5.67□□□□□ -1.5
MSH4YFL003C HAA1Q12753 694 aaKnown RBP5.66□□□□□ -1.5
MSH4YFL003C BBC1P47068 1157 aa5.65□□□□□ -1.51
MSH4YFL003C YPR148CQ06523 435 aa5.64□□□□□ -1.51
MSH4YFL003C SET1P38827 1080 aaKnown RBP5.63□□□□□ -1.51
MSH4YFL003C MAP2P38174 421 aaKnown RBP5.61□□□□□ -1.51
MSH4YFL003C VPS29P38759 282 aa5.61□□□□□ -1.51
MSH4YFL003C SCY1P53009 804 aa5.61□□□□□ -1.51
MSH4YFL003C ABP1P15891 592 aaKnown RBP5.57□□□□□ -1.52
MSH4YFL003C RTG3P38165 486 aa5.57□□□□□ -1.52
MSH4YFL003C MAK11P20484 414 aaKnown RBP5.57□□□□□ -1.52
MSH4YFL003C VPS70P47161 811 aa5.54□□□□□ -1.52
MSH4YFL003C UBP10P53874 792 aaPredicted RBP5.53□□□□□ -1.52
MSH4YFL003C STS1P38637 319 aa5.52□□□□□ -1.53
MSH4YFL003C DMA2P53924 522 aa5.51□□□□□ -1.53
MSH4YFL003C EDS1P38073 919 aa5.5□□□□□ -1.53
MSH4YFL003C COQ8P27697 501 aa5.5□□□□□ -1.53
MSH4YFL003C RPN1P38764 993 aaKnown RBP5.5□□□□□ -1.53
MSH4YFL003C DSF2P38213 736 aa5.49□□□□□ -1.53
MSH4YFL003C CKB1P43639 278 aa5.47□□□□□ -1.53
MSH4YFL003C SPB4P25808 606 aaPredicted RBP5.45□□□□□ -1.54
MSH4YFL003C PBS2P08018 668 aa5.43□□□□□ -1.54
MSH4YFL003C IFH1P39520 1085 aa5.43□□□□□ -1.54
MSH4YFL003C YMR1P47147 688 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
MSH4YFL003C SLX5P32828 619 aaKnown RBP5.43□□□□□ -1.54
MSH4YFL003C YFR006WP43590 535 aa5.43□□□□□ -1.54
MSH4YFL003C DBP1P24784 617 aaKnown RBP5.42□□□□□ -1.54
MSH4YFL003C NUP42P49686 430 aaKnown RBP5.42□□□□□ -1.54
MSH4YFL003C YGL015CP33199 130 aa5.41□□□□□ -1.54
MSH4YFL003C DIT2P21595 489 aa5.39□□□□□ -1.55
MSH4YFL003C NOP53Q12080 455 aaKnown RBP5.39□□□□□ -1.55
MSH4YFL003C MIF2P35201 549 aa5.37□□□□□ -1.55
MSH4YFL003C PTC3P34221 468 aaKnown RBP5.37□□□□□ -1.55
MSH4YFL003C YDR090CQ03193 310 aa5.36□□□□□ -1.55
MSH4YFL003C YNR021WP53723 404 aaKnown RBP5.35□□□□□ -1.55
MSH4YFL003C YOR238WQ08634 303 aa5.35□□□□□ -1.55
MSH4YFL003C NSR1P27476 414 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
MSH4YFL003C GLC3P32775 704 aa5.34□□□□□ -1.55
MSH4YFL003C KIN1P13185 1064 aa5.34□□□□□ -1.55
MSH4YFL003C UBP14P38237 781 aaKnown RBP5.34□□□□□ -1.55
MSH4YFL003C REF2P42073 533 aaPredicted RBP5.34□□□□□ -1.55
MSH4YFL003C COX6P00427 148 aa5.33□□□□□ -1.56
MSH4YFL003C IES2P40154 320 aa5.32□□□□□ -1.56
MSH4YFL003C PIB1Q06651 286 aa5.32□□□□□ -1.56
MSH4YFL003C SOL3P38858 249 aa5.31□□□□□ -1.56
MSH4YFL003C MAM3Q12296 706 aa5.31□□□□□ -1.56
MSH4YFL003C GUA1P38625 525 aaKnown RBP5.31□□□□□ -1.56
MSH4YFL003C VMA1P17255 1071 aaKnown RBP5.3□□□□□ -1.56
MSH4YFL003C NST1P53935 1240 aa5.3□□□□□ -1.56
MSH4YFL003C AIM7Q12156 149 aa5.3□□□□□ -1.56
MSH4YFL003C YLR326WQ06170 240 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms