RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C HNM1P19807 563 aa1.26□□□□□ -2.21
SEC3YER008C SEC62P21825 274 aa1.26□□□□□ -2.21
SEC3YER008C PHO84P25297 587 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C OCA4P25366 362 aa1.26□□□□□ -2.21
SEC3YER008C BUD14P27637 709 aa1.26□□□□□ -2.21
SEC3YER008C RPN2P32565 945 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C YKL100CP34248 587 aa1.26□□□□□ -2.21
SEC3YER008C VID24P38263 362 aa1.26□□□□□ -2.21
SEC3YER008C ERC1P38767 581 aa1.26□□□□□ -2.21
SEC3YER008C YHR177WP38867 453 aa1.26□□□□□ -2.21
SEC3YER008C YMR124WP39523 943 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C PTR3P43606 678 aa1.26□□□□□ -2.21
SEC3YER008C NET1P47035 1189 aa1.26□□□□□ -2.21
SEC3YER008C ECM27P47144 725 aa1.26□□□□□ -2.21
SEC3YER008C STP1Q00947 519 aa1.26□□□□□ -2.21
SEC3YER008C SNU56Q03782 492 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C RBA50Q04418 439 aa1.26□□□□□ -2.21
SEC3YER008C RPS10AQ08745 105 aaPredicted RBP1.26□□□□□ -2.21
SEC3YER008C CFT2Q12102 859 aaPredicted RBP1.26□□□□□ -2.21
SEC3YER008C VPS63O13549 108 aa1.26□□□□□ -2.21
SEC3YER008C COX3P00420 269 aa1.26□□□□□ -2.21
SEC3YER008C VMA2P16140 517 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C RPB8P20436 146 aa1.26□□□□□ -2.21
SEC3YER008C CPR2P23285 205 aa1.26□□□□□ -2.21
SEC3YER008C SNT1P25357 1226 aa1.26□□□□□ -2.21
SEC3YER008C LAC1P28496 418 aa1.26□□□□□ -2.21
SEC3YER008C SLM4P38247 162 aa1.26□□□□□ -2.21
SEC3YER008C CTM1P38818 585 aa1.26□□□□□ -2.21
SEC3YER008C ROK1P45818 564 aaPredicted RBP1.26□□□□□ -2.21
SEC3YER008C RPS10BP46784 105 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C VPS25P47142 202 aa1.26□□□□□ -2.21
SEC3YER008C FMS1P50264 508 aa1.26□□□□□ -2.21
SEC3YER008C ROG1P53118 685 aa1.26□□□□□ -2.21
SEC3YER008C MRPL1Q04599 285 aa1.26□□□□□ -2.21
SEC3YER008C ARG7Q04728 441 aa1.26□□□□□ -2.21
SEC3YER008C RCO1Q04779 684 aa1.26□□□□□ -2.21
SEC3YER008C SWT1Q12104 458 aa1.26□□□□□ -2.21
SEC3YER008C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
SEC3YER008C RPL7AP05737 244 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C SIR3P06701 978 aa1.26□□□□□ -2.21
SEC3YER008C AQY1P0CD91 305 aa1.26□□□□□ -2.21
SEC3YER008C YML002WP0CF17 737 aa1.26□□□□□ -2.21
SEC3YER008C SPS22P25380 463 aa1.26□□□□□ -2.21
SEC3YER008C YCR061WP25639 631 aa1.26□□□□□ -2.21
SEC3YER008C PPZ1P26570 692 aa1.26□□□□□ -2.21
SEC3YER008C YMC1P32331 307 aa1.26□□□□□ -2.21
SEC3YER008C CUE2P36075 443 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C STP2P38704 541 aa1.26□□□□□ -2.21
SEC3YER008C RRP4P38792 359 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C CHS7P38843 316 aa1.26□□□□□ -2.21
SEC3YER008C YIL089WP40500 205 aa1.26□□□□□ -2.21
SEC3YER008C CCT7P42943 550 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C LSB1P53281 241 aa1.26□□□□□ -2.21
SEC3YER008C ADE16P54113 591 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C SMA1Q02651 245 aa1.26□□□□□ -2.21
SEC3YER008C YML122CQ03207 126 aa1.26□□□□□ -2.21
SEC3YER008C PDS5Q04264 1277 aa1.26□□□□□ -2.21
SEC3YER008C ECM18Q04623 453 aa1.26□□□□□ -2.21
SEC3YER008C YDL057WQ07379 328 aa1.26□□□□□ -2.21
SEC3YER008C RPL7BQ12213 244 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C RRD2Q12461 358 aa1.26□□□□□ -2.21
SEC3YER008C PFK27Q12471 397 aaPredicted RBP1.26□□□□□ -2.21
SEC3YER008C NOP58Q12499 511 aaKnown RBP1.26□□□□□ -2.21
SEC3YER008C SFG1Q12507 346 aa1.26□□□□□ -2.21
SEC3YER008C YJR112W-AQ3E743 109 aa1.26□□□□□ -2.21
SEC3YER008C YBR085C-AO43137 85 aa1.25□□□□□ -2.21
SEC3YER008C CHO1P08456 276 aa1.25□□□□□ -2.21
SEC3YER008C PCT1P13259 424 aa1.25□□□□□ -2.21
SEC3YER008C SAG1P20840 650 aa1.25□□□□□ -2.21
SEC3YER008C BUD5P25300 642 aaPredicted RBP1.25□□□□□ -2.21
SEC3YER008C IDH2P28241 369 aaKnown RBP1.25□□□□□ -2.21
SEC3YER008C YUH1P35127 236 aa1.25□□□□□ -2.21
SEC3YER008C ROT2P38138 954 aa1.25□□□□□ -2.21
SEC3YER008C YPT10P38146 199 aa1.25□□□□□ -2.21
SEC3YER008C MMS4P38257 691 aa1.25□□□□□ -2.21
SEC3YER008C APD1P38281 316 aa1.25□□□□□ -2.21
SEC3YER008C MNL1P38888 796 aa1.25□□□□□ -2.21
SEC3YER008C AIM20P40451 204 aa1.25□□□□□ -2.21
SEC3YER008C YFL015CP43578 164 aa1.25□□□□□ -2.21
SEC3YER008C BUL1P48524 976 aa1.25□□□□□ -2.21
SEC3YER008C YNL143CP53908 130 aa1.25□□□□□ -2.21
SEC3YER008C CUR1Q06469 252 aa1.25□□□□□ -2.21
SEC3YER008C TIP41Q12199 356 aa1.25□□□□□ -2.21
SEC3YER008C MOT1P32333 1867 aa1.25□□□□□ -2.21
SEC3YER008C ROM2P51862 1356 aaKnown RBP1.25□□□□□ -2.21
SEC3YER008C MRP2P10663 115 aaPredicted RBP1.25□□□□□ -2.21
SEC3YER008C BIK1P11709 440 aa1.25□□□□□ -2.21
SEC3YER008C URA4P20051 364 aa1.25□□□□□ -2.21
SEC3YER008C VMA16P23968 213 aa1.25□□□□□ -2.21
SEC3YER008C ADY2P25613 283 aa1.25□□□□□ -2.21
SEC3YER008C YME2P32843 850 aa1.25□□□□□ -2.21
SEC3YER008C CMC1P36064 111 aa1.25□□□□□ -2.21
SEC3YER008C YMC2P38087 329 aa1.25□□□□□ -2.21
SEC3YER008C SCC4P40090 624 aa1.25□□□□□ -2.21
SEC3YER008C DJP1P40564 432 aa1.25□□□□□ -2.21
SEC3YER008C SMC3P47037 1230 aa1.25□□□□□ -2.21
SEC3YER008C YPR003CP53394 754 aa1.25□□□□□ -2.21
SEC3YER008C AQR1P53943 586 aa1.25□□□□□ -2.21
SEC3YER008C VTC3Q02725 835 aa1.25□□□□□ -2.21
SEC3YER008C ACL4Q03771 387 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms