RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C LCL3P53153 274 aa2.21□□□□□ -2.06
SSD1YDR293C YGR045CP53229 120 aa2.21□□□□□ -2.06
SSD1YDR293C YNL143CP53908 130 aa2.21□□□□□ -2.06
SSD1YDR293C YPL107WQ02873 248 aa2.21□□□□□ -2.06
SSD1YDR293C EAR1Q03212 550 aa2.21□□□□□ -2.06
SSD1YDR293C RCR2Q03446 210 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C ARP10Q04549 284 aa2.21□□□□□ -2.06
SSD1YDR293C DYN3Q04949 312 aa2.21□□□□□ -2.06
SSD1YDR293C YSH1Q06224 779 aaPredicted RBP2.21□□□□□ -2.06
SSD1YDR293C TSR2Q06672 205 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C STP4Q07351 490 aa2.21□□□□□ -2.06
SSD1YDR293C MFG1Q07684 458 aa2.21□□□□□ -2.06
SSD1YDR293C VPS54Q12071 889 aa2.21□□□□□ -2.06
SSD1YDR293C COS2P0CX12 379 aa2.21□□□□□ -2.06
SSD1YDR293C COS3P0CX13 379 aa2.21□□□□□ -2.06
SSD1YDR293C RPS4AP0CX35 261 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C RPS4BP0CX36 261 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C CTS1P29029 562 aa2.21□□□□□ -2.06
SSD1YDR293C SYN8P31377 255 aa2.21□□□□□ -2.06
SSD1YDR293C LIP5P32875 414 aa2.21□□□□□ -2.06
SSD1YDR293C HCS1P34243 683 aa2.21□□□□□ -2.06
SSD1YDR293C APM3P38153 483 aa2.21□□□□□ -2.06
SSD1YDR293C YBR053CP38235 358 aa2.21□□□□□ -2.06
SSD1YDR293C YBP1P38315 674 aa2.21□□□□□ -2.06
SSD1YDR293C YHL026CP38740 315 aa2.21□□□□□ -2.06
SSD1YDR293C PIK1P39104 1066 aa2.21□□□□□ -2.06
SSD1YDR293C RBG1P39729 369 aa2.21□□□□□ -2.06
SSD1YDR293C TPA1P40032 644 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C YIL108WP40483 696 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C BIT61P47041 543 aa2.21□□□□□ -2.06
SSD1YDR293C VTC4P47075 721 aa2.21□□□□□ -2.06
SSD1YDR293C GTO1P48239 356 aa2.21□□□□□ -2.06
SSD1YDR293C UPF3P48412 387 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C GCV2P49095 1034 aa2.21□□□□□ -2.06
SSD1YDR293C CTR1P49573 406 aa2.21□□□□□ -2.06
SSD1YDR293C NSE5Q03718 556 aa2.21□□□□□ -2.06
SSD1YDR293C DBP9Q06218 594 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C BUD7Q08754 746 aa2.21□□□□□ -2.06
SSD1YDR293C ARP7Q12406 477 aa2.21□□□□□ -2.06
SSD1YDR293C APC2Q12440 853 aa2.21□□□□□ -2.06
SSD1YDR293C RPL6BP05739 176 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C MAS2P11914 482 aa2.21□□□□□ -2.06
SSD1YDR293C RAP1P11938 827 aa2.21□□□□□ -2.06
SSD1YDR293C HMG2P12684 1045 aa2.21□□□□□ -2.06
SSD1YDR293C LAT1P12695 482 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C CNA1P23287 553 aa2.21□□□□□ -2.06
SSD1YDR293C YCL068CP25593 260 aa2.21□□□□□ -2.06
SSD1YDR293C IMP3P32899 183 aaPredicted RBP2.21□□□□□ -2.06
SSD1YDR293C SIP2P34164 415 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C AST1P35183 429 aa2.21□□□□□ -2.06
SSD1YDR293C MTH1P35198 433 aa2.21□□□□□ -2.06
SSD1YDR293C TEF4P36008 412 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C TDA11P38854 504 aa2.21□□□□□ -2.06
SSD1YDR293C UME6P39001 836 aa2.21□□□□□ -2.06
SSD1YDR293C SER3P40054 469 aa2.21□□□□□ -2.06
SSD1YDR293C UBP7P40453 1071 aa2.21□□□□□ -2.06
SSD1YDR293C MAF1P41910 395 aa2.21□□□□□ -2.06
SSD1YDR293C TAH11P47112 604 aa2.21□□□□□ -2.06
SSD1YDR293C KEL2P50090 882 aa2.21□□□□□ -2.06
SSD1YDR293C NCS6P53088 359 aa2.21□□□□□ -2.06
SSD1YDR293C NRD1P53617 575 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SSD1YDR293C LSM3P57743 89 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C EFR3Q03653 782 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C HED1Q03937 162 aa2.21□□□□□ -2.06
SSD1YDR293C PPN1Q04119 674 aa2.21□□□□□ -2.06
SSD1YDR293C MUS81Q04149 632 aaPredicted RBP2.21□□□□□ -2.06
SSD1YDR293C ERB1Q04660 807 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C NEJ1Q06148 342 aa2.21□□□□□ -2.06
SSD1YDR293C ATG26Q06321 1198 aa2.21□□□□□ -2.06
SSD1YDR293C HBT1Q07653 1046 aaKnown RBP2.21□□□□□ -2.06
SSD1YDR293C SGO1Q08490 590 aa2.21□□□□□ -2.06
SSD1YDR293C TGS1Q12052 315 aa2.21□□□□□ -2.06
SSD1YDR293C HAL9Q12180 1030 aa2.21□□□□□ -2.06
SSD1YDR293C SCM3Q12334 223 aa2.21□□□□□ -2.06
SSD1YDR293C RPL11AP0C0W9 174 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C TFS1P14306 219 aa2.2□□□□□ -2.06
SSD1YDR293C YAP1P19880 650 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C IME1P21190 360 aa2.2□□□□□ -2.06
SSD1YDR293C CMK1P27466 446 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C MRPL6P32904 214 aa2.2□□□□□ -2.06
SSD1YDR293C NTR2P36118 322 aaPredicted RBP2.2□□□□□ -2.06
SSD1YDR293C ETP1P38748 585 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C EXO1P39875 702 aa2.2□□□□□ -2.06
SSD1YDR293C AVT1P47082 602 aa2.2□□□□□ -2.06
SSD1YDR293C USE1P53146 245 aa2.2□□□□□ -2.06
SSD1YDR293C MPS2P53159 387 aa2.2□□□□□ -2.06
SSD1YDR293C IBD2P53892 351 aa2.2□□□□□ -2.06
SSD1YDR293C IMP4P53941 290 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C ECM9Q02202 377 aa2.2□□□□□ -2.06
SSD1YDR293C RAD30Q04049 632 aa2.2□□□□□ -2.06
SSD1YDR293C ASM4Q05166 528 aa2.2□□□□□ -2.06
SSD1YDR293C COX17Q12287 69 aa2.2□□□□□ -2.06
SSD1YDR293C TRM10Q12400 293 aa2.2□□□□□ -2.06
SSD1YDR293C RPL11BQ3E757 174 aaPredicted RBP2.2□□□□□ -2.06
SSD1YDR293C ATP2P00830 511 aaKnown RBP2.2□□□□□ -2.06
SSD1YDR293C CHL1P22516 861 aaPredicted RBP2.2□□□□□ -2.06
SSD1YDR293C RRP7P25368 297 aaPredicted RBP2.2□□□□□ -2.06
SSD1YDR293C YIH1P25637 258 aa2.2□□□□□ -2.06
SSD1YDR293C RAD14P28519 371 aa2.2□□□□□ -2.06
SSD1YDR293C PRR1P28708 518 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms