RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	ACL4	Q03771	387 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	SLK19	Q08581	821 aa	Known RBP	4.24	□□□□□ -1.73
RTK1	YDL025C	SPS4	P09937	338 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	URA4	P20051	364 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	SIF2	P38262	535 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	RIX1	P38883	763 aa	Predicted RBP	4.24	□□□□□ -1.73
RTK1	YDL025C	SER3	P40054	469 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	MEP1	P40260	492 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	FYV8	P46949	817 aa	Known RBP	4.24	□□□□□ -1.73
RTK1	YDL025C	AIM22	P47051	409 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	YGR126W	P53274	230 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	GND2	P53319	492 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	YMR130W	Q04223	302 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	TMN2	Q04562	672 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	REX3	Q12090	404 aa		4.24	□□□□□ -1.73
RTK1	YDL025C	GLK1	P17709	500 aa	Known RBP	4.23	□□□□□ -1.73
RTK1	YDL025C	SPO7	P18410	259 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	SUI2	P20459	304 aa	Known RBP	4.23	□□□□□ -1.73
RTK1	YDL025C	MAK32	P23060	363 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	PHO84	P25297	587 aa	Known RBP	4.23	□□□□□ -1.73
RTK1	YDL025C	UIP5	P36137	443 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	GND1	P38720	489 aa	Known RBP	4.23	□□□□□ -1.73
RTK1	YDL025C	WSS1	P38838	269 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	ATG27	P46989	271 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	ORC5	P50874	479 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	RHO5	P53879	331 aa	Known RBP	4.23	□□□□□ -1.73
RTK1	YDL025C	PDR8	Q06149	701 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	AEP3	Q12089	606 aa		4.23	□□□□□ -1.73
RTK1	YDL025C	RPL6B	P05739	176 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	COR1	P07256	457 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	GPA1	P08539	472 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	PRP2	P20095	876 aa	Predicted RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	GYP6	P32806	458 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	MTR2	P34232	184 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	PXL1	P36166	706 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	ARA1	P38115	344 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	MBB1	P39534	108 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	YJL107C	P42947	387 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	YJL132W	P47014	750 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	OCA1	P50946	238 aa	Predicted RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	YGL108C	P53139	140 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	DUG3	P53871	357 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	YVH1	Q02256	364 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	RPL6A	Q02326	176 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	PPM1	Q04081	328 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	MCH4	Q08268	501 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	YLR278C	Q05854	1341 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	PUT2	P07275	575 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	MIA40	P36046	403 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	PIM1	P36775	1133 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	CIN1	P40987	1014 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	ALK1	P43633	760 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	RPT4	P53549	437 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	SNU56	Q03782	492 aa	Known RBP	4.22	□□□□□ -1.73
RTK1	YDL025C	ATG26	Q06321	1198 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	PUS9	Q12069	462 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	HSP42	Q12329	375 aa		4.22	□□□□□ -1.73
RTK1	YDL025C	RAV1	P47104	1357 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	RPN13	O13563	156 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	CLN1	P20437	546 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	CLB2	P24869	491 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	GSY2	P27472	705 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	SHP1	P34223	423 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	OCT1	P35999	772 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	MMS4	P38257	691 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	YSW1	P38280	609 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	TIF4631	P39935	952 aa	Known RBP	4.21	□□□□□ -1.74
RTK1	YDL025C	YEL020C	P39994	560 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	FET5	P43561	622 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	MLC1	P53141	149 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	NCS2	P53923	493 aa	Predicted RBP	4.21	□□□□□ -1.74
RTK1	YDL025C	ADA2	Q02336	434 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	THP1	Q08231	455 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	SUT2	Q12286	268 aa		4.21	□□□□□ -1.74
RTK1	YDL025C	RDL1	Q12305	139 aa	Known RBP	4.21	□□□□□ -1.74
RTK1	YDL025C	SNF3	P10870	884 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	NUP1	P20676	1076 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	ROT2	P38138	954 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	CHS7	P38843	316 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	SNG1	P46950	547 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	LYS20	P48570	428 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	FMP30	Q02883	468 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	ADE13	Q05911	482 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	VAM3	Q12241	283 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	YDR061W	Q12298	539 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	RHO2	P06781	192 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	CBP1	P07252	654 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	PEP4	P07267	405 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	MCM4	P30665	933 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	ADH5	P38113	351 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	ALT2	P52892	507 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	ASI1	P54074	624 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	DIS3	Q08162	1001 aa	Known RBP	4.2	□□□□□ -1.74
RTK1	YDL025C	MED2	Q12124	431 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	NCE102	Q12207	173 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
RTK1	YDL025C	PSY3	Q12318	242 aa		4.2	□□□□□ -1.74
RTK1	YDL025C	GPH1	P06738	902 aa	Known RBP	4.19	□□□□□ -1.74
RTK1	YDL025C	HIR2	P32480	875 aa		4.19	□□□□□ -1.74
RTK1	YDL025C	MOH1	P38191	138 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms